function [VOI, STATES, ALGEBRAIC, CONSTANTS] = mainFunction() % This is the "main function". In Matlab, things work best if you rename this function to match the filename. [VOI, STATES, ALGEBRAIC, CONSTANTS] = solveModel(); end function [algebraicVariableCount] = getAlgebraicVariableCount() % Used later when setting a global variable with the number of algebraic variables. % Note: This is not the "main method". algebraicVariableCount =123; end % There are a total of 17 entries in each of the rate and state variable arrays. % There are a total of 59 entries in the constant variable array. % function [VOI, STATES, ALGEBRAIC, CONSTANTS] = solveModel() % Create ALGEBRAIC of correct size global algebraicVariableCount; algebraicVariableCount = getAlgebraicVariableCount(); % Initialise constants and state variables [INIT_STATES, CONSTANTS] = initConsts; % Set timespan to solve over tspan = [0, 10]; % Set numerical accuracy options for ODE solver options = odeset('RelTol', 1e-06, 'AbsTol', 1e-06, 'MaxStep', 1); % Solve model with ODE solver [VOI, STATES] = ode15s(@(VOI, STATES)computeRates(VOI, STATES, CONSTANTS), tspan, INIT_STATES, options); % Compute algebraic variables [RATES, ALGEBRAIC] = computeRates(VOI, STATES, CONSTANTS); ALGEBRAIC = computeAlgebraic(ALGEBRAIC, CONSTANTS, STATES, VOI); % Plot state variables against variable of integration [LEGEND_STATES, LEGEND_ALGEBRAIC, LEGEND_VOI, LEGEND_CONSTANTS] = createLegends(); figure(); plot(VOI, STATES); xlabel(LEGEND_VOI); l = legend(LEGEND_STATES); set(l,'Interpreter','none'); end function [LEGEND_STATES, LEGEND_ALGEBRAIC, LEGEND_VOI, LEGEND_CONSTANTS] = createLegends() LEGEND_STATES = ''; LEGEND_ALGEBRAIC = ''; LEGEND_VOI = ''; LEGEND_CONSTANTS = ''; LEGEND_VOI = strpad('t in component environment (second)'); LEGEND_CONSTANTS(:,1) = strpad('C_m in component environment (fF)'); LEGEND_STATES(:,1) = strpad('q_Ca_o in component environment (fmol)'); LEGEND_STATES(:,2) = strpad('q_Ca_i in component environment (fmol)'); LEGEND_STATES(:,3) = strpad('q_K_o in component environment (fmol)'); LEGEND_STATES(:,4) = strpad('q_K_i in component environment (fmol)'); LEGEND_STATES(:,5) = strpad('q_S000_LCC in component environment (fmol)'); LEGEND_STATES(:,6) = strpad('q_S010_LCC in component environment (fmol)'); LEGEND_STATES(:,7) = strpad('q_S020_LCC in component environment (fmol)'); LEGEND_STATES(:,8) = strpad('q_S100_LCC in component environment (fmol)'); LEGEND_STATES(:,9) = strpad('q_S110_LCC in component environment (fmol)'); LEGEND_STATES(:,10) = strpad('q_S120_LCC in component environment (fmol)'); LEGEND_STATES(:,11) = strpad('q_S001_LCC in component environment (fmol)'); LEGEND_STATES(:,12) = strpad('q_S011_LCC in component environment (fmol)'); LEGEND_STATES(:,13) = strpad('q_S021_LCC in component environment (fmol)'); LEGEND_STATES(:,14) = strpad('q_S101_LCC in component environment (fmol)'); LEGEND_STATES(:,15) = strpad('q_S111_LCC in component environment (fmol)'); LEGEND_STATES(:,16) = strpad('q_S121_LCC in component environment (fmol)'); LEGEND_STATES(:,17) = strpad('q_mem in component environment (fC)'); LEGEND_ALGEBRAIC(:,120) = strpad('I_mem_LCC in component LCC (fA)'); LEGEND_ALGEBRAIC(:,116) = strpad('v_Ca_o_LCC in component LCC (fmol_per_sec)'); LEGEND_ALGEBRAIC(:,117) = strpad('v_Ca_i_LCC in component LCC (fmol_per_sec)'); LEGEND_ALGEBRAIC(:,121) = strpad('v_K_o_LCC in component LCC (fmol_per_sec)'); LEGEND_ALGEBRAIC(:,122) = strpad('v_K_i_LCC in component LCC (fmol_per_sec)'); LEGEND_CONSTANTS(:,2) = strpad('kappa_LCC_Ca1 in component LCC_parameters (fmol_per_sec)'); LEGEND_CONSTANTS(:,3) = strpad('kappa_LCC_Ca2 in component LCC_parameters (fmol_per_sec)'); LEGEND_CONSTANTS(:,4) = strpad('kappa_LCC_K1 in component LCC_parameters (fmol_per_sec)'); LEGEND_CONSTANTS(:,5) = strpad('kappa_LCC_K2 in component LCC_parameters (fmol_per_sec)'); LEGEND_CONSTANTS(:,6) = strpad('kappa_d000 in component LCC_parameters (fmol_per_sec)'); LEGEND_CONSTANTS(:,7) = strpad('kappa_d010 in component LCC_parameters (fmol_per_sec)'); LEGEND_CONSTANTS(:,8) = strpad('kappa_d020 in component LCC_parameters (fmol_per_sec)'); LEGEND_CONSTANTS(:,9) = strpad('kappa_d001 in component LCC_parameters (fmol_per_sec)'); LEGEND_CONSTANTS(:,10) = strpad('kappa_d011 in component LCC_parameters (fmol_per_sec)'); LEGEND_CONSTANTS(:,11) = strpad('kappa_d021 in component LCC_parameters (fmol_per_sec)'); LEGEND_CONSTANTS(:,12) = strpad('kappa_f1_000 in component LCC_parameters (fmol_per_sec)'); LEGEND_CONSTANTS(:,13) = strpad('kappa_f1_100 in component LCC_parameters (fmol_per_sec)'); LEGEND_CONSTANTS(:,14) = strpad('kappa_f1_001 in component LCC_parameters (fmol_per_sec)'); LEGEND_CONSTANTS(:,15) = strpad('kappa_f1_101 in component LCC_parameters (fmol_per_sec)'); LEGEND_CONSTANTS(:,16) = strpad('kappa_f2_000 in component LCC_parameters (fmol_per_sec)'); LEGEND_CONSTANTS(:,17) = strpad('kappa_f2_100 in component LCC_parameters (fmol_per_sec)'); LEGEND_CONSTANTS(:,18) = strpad('kappa_f2_001 in component LCC_parameters (fmol_per_sec)'); LEGEND_CONSTANTS(:,19) = strpad('kappa_f2_101 in component LCC_parameters (fmol_per_sec)'); LEGEND_CONSTANTS(:,20) = strpad('kappa_f3_010 in component LCC_parameters (fmol_per_sec)'); LEGEND_CONSTANTS(:,21) = strpad('kappa_f3_110 in component LCC_parameters (fmol_per_sec)'); LEGEND_CONSTANTS(:,22) = strpad('kappa_f3_011 in component LCC_parameters (fmol_per_sec)'); LEGEND_CONSTANTS(:,23) = strpad('kappa_f3_111 in component LCC_parameters (fmol_per_sec)'); LEGEND_CONSTANTS(:,24) = strpad('kappa_fCa000 in component LCC_parameters (fmol_per_sec)'); LEGEND_CONSTANTS(:,25) = strpad('kappa_fCa100 in component LCC_parameters (fmol_per_sec)'); LEGEND_CONSTANTS(:,26) = strpad('kappa_fCa010 in component LCC_parameters (fmol_per_sec)'); LEGEND_CONSTANTS(:,27) = strpad('kappa_fCa110 in component LCC_parameters (fmol_per_sec)'); LEGEND_CONSTANTS(:,28) = strpad('kappa_fCa020 in component LCC_parameters (fmol_per_sec)'); LEGEND_CONSTANTS(:,29) = strpad('kappa_fCa120 in component LCC_parameters (fmol_per_sec)'); LEGEND_CONSTANTS(:,30) = strpad('K_Ca_i in component LCC_parameters (per_fmol)'); LEGEND_CONSTANTS(:,31) = strpad('K_Ca_o in component LCC_parameters (per_fmol)'); LEGEND_CONSTANTS(:,32) = strpad('K_K_i in component LCC_parameters (per_fmol)'); LEGEND_CONSTANTS(:,33) = strpad('K_K_o in component LCC_parameters (per_fmol)'); LEGEND_CONSTANTS(:,34) = strpad('K_000_LCC in component LCC_parameters (per_fmol)'); LEGEND_CONSTANTS(:,35) = strpad('K_010_LCC in component LCC_parameters (per_fmol)'); LEGEND_CONSTANTS(:,36) = strpad('K_020_LCC in component LCC_parameters (per_fmol)'); LEGEND_CONSTANTS(:,37) = strpad('K_100_LCC in component LCC_parameters (per_fmol)'); LEGEND_CONSTANTS(:,38) = strpad('K_110_LCC in component LCC_parameters (per_fmol)'); LEGEND_CONSTANTS(:,39) = strpad('K_120_LCC in component LCC_parameters (per_fmol)'); LEGEND_CONSTANTS(:,40) = strpad('K_001_LCC in component LCC_parameters (per_fmol)'); LEGEND_CONSTANTS(:,41) = strpad('K_011_LCC in component LCC_parameters (per_fmol)'); LEGEND_CONSTANTS(:,42) = strpad('K_021_LCC in component LCC_parameters (per_fmol)'); LEGEND_CONSTANTS(:,43) = strpad('K_101_LCC in component LCC_parameters (per_fmol)'); LEGEND_CONSTANTS(:,44) = strpad('K_111_LCC in component LCC_parameters (per_fmol)'); LEGEND_CONSTANTS(:,45) = strpad('K_121_LCC in component LCC_parameters (per_fmol)'); LEGEND_CONSTANTS(:,46) = strpad('zCa in component LCC_parameters (dimensionless)'); LEGEND_CONSTANTS(:,47) = strpad('zK in component LCC_parameters (dimensionless)'); LEGEND_CONSTANTS(:,48) = strpad('z_fd in component LCC_parameters (dimensionless)'); LEGEND_CONSTANTS(:,49) = strpad('z_ff1 in component LCC_parameters (dimensionless)'); LEGEND_CONSTANTS(:,50) = strpad('z_ff2 in component LCC_parameters (dimensionless)'); LEGEND_CONSTANTS(:,51) = strpad('z_ff3 in component LCC_parameters (dimensionless)'); LEGEND_CONSTANTS(:,52) = strpad('z_rCa in component LCC_parameters (dimensionless)'); LEGEND_CONSTANTS(:,53) = strpad('z_rd in component LCC_parameters (dimensionless)'); LEGEND_CONSTANTS(:,54) = strpad('z_rf1 in component LCC_parameters (dimensionless)'); LEGEND_CONSTANTS(:,55) = strpad('z_rf2 in component LCC_parameters (dimensionless)'); LEGEND_CONSTANTS(:,56) = strpad('z_rf3 in component LCC_parameters (dimensionless)'); LEGEND_CONSTANTS(:,57) = strpad('R in component constants (J_per_K_per_mol)'); LEGEND_CONSTANTS(:,58) = strpad('T in component constants (kelvin)'); LEGEND_CONSTANTS(:,59) = strpad('F in component constants (C_per_mol)'); LEGEND_ALGEBRAIC(:,7) = strpad('mu_Ca_o in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,8) = strpad('mu_Ca_i in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,9) = strpad('mu_K_o in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,10) = strpad('mu_K_i in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,1) = strpad('V_mem in component LCC (volt)'); LEGEND_ALGEBRAIC(:,19) = strpad('Af_LCC_Ca1 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,51) = strpad('Ar_LCC_Ca1 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,47) = strpad('Am_LCC_Ca1 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,112) = strpad('v_LCC_Ca1 in component LCC (fmol_per_sec)'); LEGEND_ALGEBRAIC(:,20) = strpad('Af_LCC_Ca2 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,52) = strpad('Ar_LCC_Ca2 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,48) = strpad('Am_LCC_Ca2 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,114) = strpad('v_LCC_Ca2 in component LCC (fmol_per_sec)'); LEGEND_ALGEBRAIC(:,21) = strpad('Af_LCC_K1 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,53) = strpad('Ar_LCC_K1 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,49) = strpad('Am_LCC_K1 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,115) = strpad('v_LCC_K1 in component LCC (fmol_per_sec)'); LEGEND_ALGEBRAIC(:,22) = strpad('Af_LCC_K2 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,54) = strpad('Ar_LCC_K2 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,50) = strpad('Am_LCC_K2 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,118) = strpad('v_LCC_K2 in component LCC (fmol_per_sec)'); LEGEND_ALGEBRAIC(:,41) = strpad('Af_fCa00 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,91) = strpad('Ar_fCa00 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,92) = strpad('v_fCa00 in component LCC (fmol_per_sec)'); LEGEND_ALGEBRAIC(:,42) = strpad('Af_fCa01 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,93) = strpad('Ar_fCa01 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,96) = strpad('v_fCa01 in component LCC (fmol_per_sec)'); LEGEND_ALGEBRAIC(:,43) = strpad('Af_fCa02 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,97) = strpad('Ar_fCa02 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,100) = strpad('v_fCa02 in component LCC (fmol_per_sec)'); LEGEND_ALGEBRAIC(:,44) = strpad('Af_fCa10 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,101) = strpad('Ar_fCa10 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,104) = strpad('v_fCa10 in component LCC (fmol_per_sec)'); LEGEND_ALGEBRAIC(:,45) = strpad('Af_fCa11 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,105) = strpad('Ar_fCa11 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,108) = strpad('v_fCa11 in component LCC (fmol_per_sec)'); LEGEND_ALGEBRAIC(:,46) = strpad('Af_fCa12 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,109) = strpad('Ar_fCa12 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,111) = strpad('v_fCa12 in component LCC (fmol_per_sec)'); LEGEND_ALGEBRAIC(:,11) = strpad('mu_S000_LCC in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,94) = strpad('v_S000_LCC in component LCC (fmol_per_sec)'); LEGEND_ALGEBRAIC(:,12) = strpad('mu_S010_LCC in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,98) = strpad('v_S010_LCC in component LCC (fmol_per_sec)'); LEGEND_ALGEBRAIC(:,13) = strpad('mu_S020_LCC in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,102) = strpad('v_S020_LCC in component LCC (fmol_per_sec)'); LEGEND_ALGEBRAIC(:,14) = strpad('mu_S100_LCC in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,106) = strpad('v_S100_LCC in component LCC (fmol_per_sec)'); LEGEND_ALGEBRAIC(:,15) = strpad('mu_S110_LCC in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,110) = strpad('v_S110_LCC in component LCC (fmol_per_sec)'); LEGEND_ALGEBRAIC(:,17) = strpad('mu_S120_LCC in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,113) = strpad('v_S120_LCC in component LCC (fmol_per_sec)'); LEGEND_ALGEBRAIC(:,2) = strpad('mu_S001_LCC in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,95) = strpad('v_S001_LCC in component LCC (fmol_per_sec)'); LEGEND_ALGEBRAIC(:,3) = strpad('mu_S011_LCC in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,99) = strpad('v_S011_LCC in component LCC (fmol_per_sec)'); LEGEND_ALGEBRAIC(:,4) = strpad('mu_S021_LCC in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,103) = strpad('v_S021_LCC in component LCC (fmol_per_sec)'); LEGEND_ALGEBRAIC(:,5) = strpad('mu_S101_LCC in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,107) = strpad('v_S101_LCC in component LCC (fmol_per_sec)'); LEGEND_ALGEBRAIC(:,16) = strpad('mu_S111_LCC in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,119) = strpad('v_S111_LCC in component LCC (fmol_per_sec)'); LEGEND_ALGEBRAIC(:,18) = strpad('mu_S121_LCC in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,123) = strpad('v_S121_LCC in component LCC (fmol_per_sec)'); LEGEND_ALGEBRAIC(:,23) = strpad('Af_d000 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,55) = strpad('Ar_d000 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,56) = strpad('v_d000 in component LCC (fmol_per_sec)'); LEGEND_ALGEBRAIC(:,25) = strpad('Af_d010 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,59) = strpad('Ar_d010 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,60) = strpad('v_d010 in component LCC (fmol_per_sec)'); LEGEND_ALGEBRAIC(:,27) = strpad('Af_d020 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,63) = strpad('Ar_d020 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,64) = strpad('v_d020 in component LCC (fmol_per_sec)'); LEGEND_ALGEBRAIC(:,29) = strpad('Af_f1_000 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,67) = strpad('Ar_f1_000 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,68) = strpad('v_f1_000 in component LCC (fmol_per_sec)'); LEGEND_ALGEBRAIC(:,33) = strpad('Af_f2_000 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,75) = strpad('Ar_f2_000 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,76) = strpad('v_f2_000 in component LCC (fmol_per_sec)'); LEGEND_ALGEBRAIC(:,37) = strpad('Af_f3_010 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,83) = strpad('Ar_f3_010 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,84) = strpad('v_f3_010 in component LCC (fmol_per_sec)'); LEGEND_ALGEBRAIC(:,31) = strpad('Af_f1_100 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,71) = strpad('Ar_f1_100 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,72) = strpad('v_f1_100 in component LCC (fmol_per_sec)'); LEGEND_ALGEBRAIC(:,35) = strpad('Af_f2_100 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,79) = strpad('Ar_f2_100 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,80) = strpad('v_f2_100 in component LCC (fmol_per_sec)'); LEGEND_ALGEBRAIC(:,39) = strpad('Af_f3_110 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,87) = strpad('Ar_f3_110 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,88) = strpad('v_f3_110 in component LCC (fmol_per_sec)'); LEGEND_ALGEBRAIC(:,24) = strpad('Af_d001 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,57) = strpad('Ar_d001 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,58) = strpad('v_d001 in component LCC (fmol_per_sec)'); LEGEND_ALGEBRAIC(:,26) = strpad('Af_d011 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,61) = strpad('Ar_d011 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,62) = strpad('v_d011 in component LCC (fmol_per_sec)'); LEGEND_ALGEBRAIC(:,28) = strpad('Af_d021 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,65) = strpad('Ar_d021 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,66) = strpad('v_d021 in component LCC (fmol_per_sec)'); LEGEND_ALGEBRAIC(:,30) = strpad('Af_f1_001 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,69) = strpad('Ar_f1_001 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,70) = strpad('v_f1_001 in component LCC (fmol_per_sec)'); LEGEND_ALGEBRAIC(:,34) = strpad('Af_f2_001 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,77) = strpad('Ar_f2_001 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,78) = strpad('v_f2_001 in component LCC (fmol_per_sec)'); LEGEND_ALGEBRAIC(:,38) = strpad('Af_f3_011 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,85) = strpad('Ar_f3_011 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,86) = strpad('v_f3_011 in component LCC (fmol_per_sec)'); LEGEND_ALGEBRAIC(:,32) = strpad('Af_f1_101 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,73) = strpad('Ar_f1_101 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,74) = strpad('v_f1_101 in component LCC (fmol_per_sec)'); LEGEND_ALGEBRAIC(:,36) = strpad('Af_f2_101 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,81) = strpad('Ar_f2_101 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,82) = strpad('v_f2_101 in component LCC (fmol_per_sec)'); LEGEND_ALGEBRAIC(:,40) = strpad('Af_f3_111 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,89) = strpad('Ar_f3_111 in component LCC (J_per_mol)'); LEGEND_ALGEBRAIC(:,90) = strpad('v_f3_111 in component LCC (fmol_per_sec)'); LEGEND_ALGEBRAIC(:,6) = strpad('Ca_tot in component LCC (fmol)'); LEGEND_RATES(:,1) = strpad('d/dt q_Ca_o in component environment (fmol)'); LEGEND_RATES(:,2) = strpad('d/dt q_Ca_i in component environment (fmol)'); LEGEND_RATES(:,3) = strpad('d/dt q_K_o in component environment (fmol)'); LEGEND_RATES(:,4) = strpad('d/dt q_K_i in component environment (fmol)'); LEGEND_RATES(:,17) = strpad('d/dt q_mem in component environment (fC)'); LEGEND_RATES(:,5) = strpad('d/dt q_S000_LCC in component environment (fmol)'); LEGEND_RATES(:,6) = strpad('d/dt q_S010_LCC in component environment (fmol)'); LEGEND_RATES(:,7) = strpad('d/dt q_S020_LCC in component environment (fmol)'); LEGEND_RATES(:,8) = strpad('d/dt q_S100_LCC in component environment (fmol)'); LEGEND_RATES(:,9) = strpad('d/dt q_S110_LCC in component environment (fmol)'); LEGEND_RATES(:,10) = strpad('d/dt q_S120_LCC in component environment (fmol)'); LEGEND_RATES(:,11) = strpad('d/dt q_S001_LCC in component environment (fmol)'); LEGEND_RATES(:,12) = strpad('d/dt q_S011_LCC in component environment (fmol)'); LEGEND_RATES(:,13) = strpad('d/dt q_S021_LCC in component environment (fmol)'); LEGEND_RATES(:,14) = strpad('d/dt q_S101_LCC in component environment (fmol)'); LEGEND_RATES(:,15) = strpad('d/dt q_S111_LCC in component environment (fmol)'); LEGEND_RATES(:,16) = strpad('d/dt q_S121_LCC in component environment (fmol)'); LEGEND_STATES = LEGEND_STATES'; LEGEND_ALGEBRAIC = LEGEND_ALGEBRAIC'; LEGEND_RATES = LEGEND_RATES'; LEGEND_CONSTANTS = LEGEND_CONSTANTS'; end function [STATES, CONSTANTS] = initConsts() VOI = 0; CONSTANTS = []; STATES = []; ALGEBRAIC = []; CONSTANTS(:,1) = 60000; STATES(:,1) = 0.245463158; STATES(:,2) = 6e-5; STATES(:,3) = 27.9828; STATES(:,4) = 5510; STATES(:,5) = 5.30481E-08; STATES(:,6) = 1.05036E-05; STATES(:,7) = 5.30481E-08; STATES(:,8) = 5.35845E-10; STATES(:,9) = 1.06098E-07; STATES(:,10) = 5.35845E-10; STATES(:,11) = 5.89425E-09; STATES(:,12) = 1.16708E-06; STATES(:,13) = 5.89425E-09; STATES(:,14) = 5.95377E-11; STATES(:,15) = 1.17886E-08; STATES(:,16) = 5.95377E-11; STATES(:,17) = -13039; CONSTANTS(:,2) = 74.6745; CONSTANTS(:,3) = 98.3196; CONSTANTS(:,4) = 0.131085; CONSTANTS(:,5) = 0.172592; CONSTANTS(:,6) = 53.6616; CONSTANTS(:,7) = 2.7099; CONSTANTS(:,8) = 3.56797; CONSTANTS(:,9) = 0.28538; CONSTANTS(:,10) = 0.0144117; CONSTANTS(:,11) = 0.018975; CONSTANTS(:,12) = 5.16892; CONSTANTS(:,13) = 25.6676; CONSTANTS(:,14) = 0.0274891; CONSTANTS(:,15) = 0.136504; CONSTANTS(:,16) = 0.335961; CONSTANTS(:,17) = 1.6683; CONSTANTS(:,18) = 0.00178669; CONSTANTS(:,19) = 0.00887227; CONSTANTS(:,20) = 733.001; CONSTANTS(:,21) = 3639.9; CONSTANTS(:,22) = 3.89821; CONSTANTS(:,23) = 19.3575; CONSTANTS(:,24) = 97713.8; CONSTANTS(:,25) = 485222; CONSTANTS(:,26) = 4934.53; CONSTANTS(:,27) = 24503.7; CONSTANTS(:,28) = 6497.01; CONSTANTS(:,29) = 32262.5; CONSTANTS(:,30) = 0.090536; CONSTANTS(:,31) = 0.663931; CONSTANTS(:,32) = 0.0405426; CONSTANTS(:,33) = 0.297313; CONSTANTS(:,34) = 9.07096; CONSTANTS(:,35) = 179.624; CONSTANTS(:,36) = 136.425; CONSTANTS(:,37) = 1.8267; CONSTANTS(:,38) = 36.1725; CONSTANTS(:,39) = 27.4733; CONSTANTS(:,40) = 1705.66; CONSTANTS(:,41) = 33775.6; CONSTANTS(:,42) = 25652.8; CONSTANTS(:,43) = 343.485; CONSTANTS(:,44) = 6801.71; CONSTANTS(:,45) = 5165.95; CONSTANTS(:,46) = 2; CONSTANTS(:,47) = 1; CONSTANTS(:,48) = 2.1404; CONSTANTS(:,49) = -1.1495; CONSTANTS(:,50) = 0.72162; CONSTANTS(:,51) = 4.2933; CONSTANTS(:,52) = 2; CONSTANTS(:,53) = -2.1404; CONSTANTS(:,54) = 1.8993; CONSTANTS(:,55) = -0.52288; CONSTANTS(:,56) = 0; CONSTANTS(:,57) = 8.31; CONSTANTS(:,58) = 310; CONSTANTS(:,59) = 96485; if (isempty(STATES)), warning('Initial values for states not set');, end end function [RATES, ALGEBRAIC] = computeRates(VOI, STATES, CONSTANTS) global algebraicVariableCount; statesSize = size(STATES); statesColumnCount = statesSize(2); if ( statesColumnCount == 1) STATES = STATES'; ALGEBRAIC = zeros(1, algebraicVariableCount); utilOnes = 1; else statesRowCount = statesSize(1); ALGEBRAIC = zeros(statesRowCount, algebraicVariableCount); RATES = zeros(statesRowCount, statesColumnCount); utilOnes = ones(statesRowCount, 1); end ALGEBRAIC(:,11) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,34).*STATES(:,5)); ALGEBRAIC(:,41) = ALGEBRAIC(:,11); ALGEBRAIC(:,8) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,30).*STATES(:,2)); ALGEBRAIC(:,91) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,40).*STATES(:,11))+ CONSTANTS(:,52).*ALGEBRAIC(:,8); ALGEBRAIC(:,92) = CONSTANTS(:,24).*(exp(ALGEBRAIC(:,41)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,91)./( CONSTANTS(:,57).*CONSTANTS(:,58)))); ALGEBRAIC(:,1) = STATES(:,17)./CONSTANTS(:,1); ALGEBRAIC(:,23) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,34).*STATES(:,5))+ CONSTANTS(:,48).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,55) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,37).*STATES(:,8))+ CONSTANTS(:,53).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,56) = CONSTANTS(:,6).*(exp(ALGEBRAIC(:,23)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,55)./( CONSTANTS(:,57).*CONSTANTS(:,58)))); ALGEBRAIC(:,29) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,34).*STATES(:,5))+ CONSTANTS(:,49).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,67) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,35).*STATES(:,6))+ CONSTANTS(:,54).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,68) = CONSTANTS(:,12).*(exp(ALGEBRAIC(:,29)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,67)./( CONSTANTS(:,57).*CONSTANTS(:,58)))); ALGEBRAIC(:,33) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,34).*STATES(:,5))+ CONSTANTS(:,50).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,75) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,36).*STATES(:,7))+ CONSTANTS(:,55).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,76) = CONSTANTS(:,16).*(exp(ALGEBRAIC(:,33)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,75)./( CONSTANTS(:,57).*CONSTANTS(:,58)))); ALGEBRAIC(:,94) = (( - ALGEBRAIC(:,56) - ALGEBRAIC(:,68)) - ALGEBRAIC(:,76)) - ALGEBRAIC(:,92); RATES(:,5) = ALGEBRAIC(:,94); ALGEBRAIC(:,24) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,40).*STATES(:,11))+ CONSTANTS(:,48).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,57) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,43).*STATES(:,14))+ CONSTANTS(:,53).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,58) = CONSTANTS(:,9).*(exp(ALGEBRAIC(:,24)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,57)./( CONSTANTS(:,57).*CONSTANTS(:,58)))); ALGEBRAIC(:,30) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,40).*STATES(:,11))+ CONSTANTS(:,49).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,69) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,41).*STATES(:,12))+ CONSTANTS(:,54).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,70) = CONSTANTS(:,14).*(exp(ALGEBRAIC(:,30)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,69)./( CONSTANTS(:,57).*CONSTANTS(:,58)))); ALGEBRAIC(:,34) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,40).*STATES(:,11))+ CONSTANTS(:,50).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,77) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,42).*STATES(:,13))+ CONSTANTS(:,55).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,78) = CONSTANTS(:,18).*(exp(ALGEBRAIC(:,34)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,77)./( CONSTANTS(:,57).*CONSTANTS(:,58)))); ALGEBRAIC(:,95) = (( - ALGEBRAIC(:,58) - ALGEBRAIC(:,70)) - ALGEBRAIC(:,78)) - - ALGEBRAIC(:,92); RATES(:,11) = ALGEBRAIC(:,95); ALGEBRAIC(:,12) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,35).*STATES(:,6)); ALGEBRAIC(:,42) = ALGEBRAIC(:,12); ALGEBRAIC(:,93) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,41).*STATES(:,12))+ CONSTANTS(:,52).*ALGEBRAIC(:,8); ALGEBRAIC(:,96) = CONSTANTS(:,26).*(exp(ALGEBRAIC(:,42)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,93)./( CONSTANTS(:,57).*CONSTANTS(:,58)))); ALGEBRAIC(:,25) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,35).*STATES(:,6))+ CONSTANTS(:,48).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,59) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,38).*STATES(:,9))+ CONSTANTS(:,53).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,60) = CONSTANTS(:,7).*(exp(ALGEBRAIC(:,25)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,59)./( CONSTANTS(:,57).*CONSTANTS(:,58)))); ALGEBRAIC(:,37) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,35).*STATES(:,6))+ CONSTANTS(:,51).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,83) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,36).*STATES(:,7))+ CONSTANTS(:,56).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,84) = CONSTANTS(:,20).*(exp(ALGEBRAIC(:,37)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,83)./( CONSTANTS(:,57).*CONSTANTS(:,58)))); ALGEBRAIC(:,98) = (( - ALGEBRAIC(:,60)+ALGEBRAIC(:,68)) - ALGEBRAIC(:,96)) - ALGEBRAIC(:,84); RATES(:,6) = ALGEBRAIC(:,98); ALGEBRAIC(:,26) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,41).*STATES(:,12))+ CONSTANTS(:,48).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,61) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,44).*STATES(:,15))+ CONSTANTS(:,53).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,62) = CONSTANTS(:,10).*(exp(ALGEBRAIC(:,26)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,61)./( CONSTANTS(:,57).*CONSTANTS(:,58)))); ALGEBRAIC(:,38) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,41).*STATES(:,12))+ CONSTANTS(:,51).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,85) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,42).*STATES(:,13))+ CONSTANTS(:,56).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,86) = CONSTANTS(:,22).*(exp(ALGEBRAIC(:,38)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,85)./( CONSTANTS(:,57).*CONSTANTS(:,58)))); ALGEBRAIC(:,99) = (( - ALGEBRAIC(:,62)+ALGEBRAIC(:,70)) - - ALGEBRAIC(:,96)) - ALGEBRAIC(:,86); RATES(:,12) = ALGEBRAIC(:,99); ALGEBRAIC(:,13) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,36).*STATES(:,7)); ALGEBRAIC(:,43) = ALGEBRAIC(:,13); ALGEBRAIC(:,97) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,42).*STATES(:,13))+ CONSTANTS(:,52).*ALGEBRAIC(:,8); ALGEBRAIC(:,100) = CONSTANTS(:,28).*(exp(ALGEBRAIC(:,43)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,97)./( CONSTANTS(:,57).*CONSTANTS(:,58)))); ALGEBRAIC(:,27) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,36).*STATES(:,7))+ CONSTANTS(:,48).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,63) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,39).*STATES(:,10))+ CONSTANTS(:,53).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,64) = CONSTANTS(:,8).*(exp(ALGEBRAIC(:,27)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,63)./( CONSTANTS(:,57).*CONSTANTS(:,58)))); ALGEBRAIC(:,102) = (( - ALGEBRAIC(:,64)+ALGEBRAIC(:,76)) - ALGEBRAIC(:,100))+ALGEBRAIC(:,84); RATES(:,7) = ALGEBRAIC(:,102); ALGEBRAIC(:,28) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,42).*STATES(:,13))+ CONSTANTS(:,48).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,65) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,45).*STATES(:,16))+ CONSTANTS(:,53).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,66) = CONSTANTS(:,11).*(exp(ALGEBRAIC(:,28)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,65)./( CONSTANTS(:,57).*CONSTANTS(:,58)))); ALGEBRAIC(:,103) = (( - ALGEBRAIC(:,66)+ALGEBRAIC(:,78)) - - ALGEBRAIC(:,100))+ALGEBRAIC(:,86); RATES(:,13) = ALGEBRAIC(:,103); ALGEBRAIC(:,14) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,37).*STATES(:,8)); ALGEBRAIC(:,44) = ALGEBRAIC(:,14); ALGEBRAIC(:,101) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,43).*STATES(:,14))+ CONSTANTS(:,52).*ALGEBRAIC(:,8); ALGEBRAIC(:,104) = CONSTANTS(:,25).*(exp(ALGEBRAIC(:,44)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,101)./( CONSTANTS(:,57).*CONSTANTS(:,58)))); ALGEBRAIC(:,31) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,37).*STATES(:,8))+ CONSTANTS(:,49).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,71) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,38).*STATES(:,9))+ CONSTANTS(:,54).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,72) = CONSTANTS(:,13).*(exp(ALGEBRAIC(:,31)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,71)./( CONSTANTS(:,57).*CONSTANTS(:,58)))); ALGEBRAIC(:,35) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,37).*STATES(:,8))+ CONSTANTS(:,50).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,79) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,39).*STATES(:,10))+ CONSTANTS(:,55).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,80) = CONSTANTS(:,17).*(exp(ALGEBRAIC(:,35)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,79)./( CONSTANTS(:,57).*CONSTANTS(:,58)))); ALGEBRAIC(:,106) = (( - ALGEBRAIC(:,80)+ALGEBRAIC(:,56)) - ALGEBRAIC(:,72)) - ALGEBRAIC(:,104); RATES(:,8) = ALGEBRAIC(:,106); ALGEBRAIC(:,32) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,43).*STATES(:,14))+ CONSTANTS(:,49).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,73) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,44).*STATES(:,15))+ CONSTANTS(:,54).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,74) = CONSTANTS(:,15).*(exp(ALGEBRAIC(:,32)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,73)./( CONSTANTS(:,57).*CONSTANTS(:,58)))); ALGEBRAIC(:,36) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,43).*STATES(:,14))+ CONSTANTS(:,50).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,81) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,45).*STATES(:,16))+ CONSTANTS(:,55).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,82) = CONSTANTS(:,19).*(exp(ALGEBRAIC(:,36)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,81)./( CONSTANTS(:,57).*CONSTANTS(:,58)))); ALGEBRAIC(:,107) = (( - ALGEBRAIC(:,82)+ALGEBRAIC(:,58)) - ALGEBRAIC(:,74)) - - ALGEBRAIC(:,104); RATES(:,14) = ALGEBRAIC(:,107); ALGEBRAIC(:,15) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,38).*STATES(:,9)); ALGEBRAIC(:,45) = ALGEBRAIC(:,15); ALGEBRAIC(:,105) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,44).*STATES(:,15))+ CONSTANTS(:,52).*ALGEBRAIC(:,8); ALGEBRAIC(:,108) = CONSTANTS(:,27).*(exp(ALGEBRAIC(:,45)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,105)./( CONSTANTS(:,57).*CONSTANTS(:,58)))); ALGEBRAIC(:,39) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,38).*STATES(:,9))+ CONSTANTS(:,51).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,87) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,39).*STATES(:,10))+ CONSTANTS(:,56).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,88) = CONSTANTS(:,21).*(exp(ALGEBRAIC(:,39)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,87)./( CONSTANTS(:,57).*CONSTANTS(:,58)))); ALGEBRAIC(:,110) = ((ALGEBRAIC(:,72)+ALGEBRAIC(:,60)) - ALGEBRAIC(:,108)) - ALGEBRAIC(:,88); RATES(:,9) = ALGEBRAIC(:,110); ALGEBRAIC(:,17) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,39).*STATES(:,10)); ALGEBRAIC(:,46) = ALGEBRAIC(:,17); ALGEBRAIC(:,109) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,45).*STATES(:,16))+ CONSTANTS(:,52).*ALGEBRAIC(:,8); ALGEBRAIC(:,111) = CONSTANTS(:,29).*(exp(ALGEBRAIC(:,46)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,109)./( CONSTANTS(:,57).*CONSTANTS(:,58)))); ALGEBRAIC(:,113) = ((ALGEBRAIC(:,80)+ALGEBRAIC(:,64)) - ALGEBRAIC(:,111))+ALGEBRAIC(:,88); RATES(:,10) = ALGEBRAIC(:,113); ALGEBRAIC(:,16) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,44).*STATES(:,15)); ALGEBRAIC(:,19) = ALGEBRAIC(:,8)+ CONSTANTS(:,46).*CONSTANTS(:,59).*ALGEBRAIC(:,1)+ALGEBRAIC(:,16); ALGEBRAIC(:,7) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,31).*STATES(:,1)); ALGEBRAIC(:,51) = ALGEBRAIC(:,7)+ALGEBRAIC(:,16); ALGEBRAIC(:,47) = CONSTANTS(:,46).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,112) = piecewise({ALGEBRAIC(:,47)==0.00000, CONSTANTS(:,2).*(exp(ALGEBRAIC(:,19)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,51)./( CONSTANTS(:,57).*CONSTANTS(:,58)))) }, ((( CONSTANTS(:,2).*ALGEBRAIC(:,47))./( CONSTANTS(:,57).*CONSTANTS(:,58)))./(exp(ALGEBRAIC(:,47)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - 1.00000)).*(exp(ALGEBRAIC(:,19)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,51)./( CONSTANTS(:,57).*CONSTANTS(:,58))))); ALGEBRAIC(:,18) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,45).*STATES(:,16)); ALGEBRAIC(:,20) = ALGEBRAIC(:,8)+ CONSTANTS(:,46).*CONSTANTS(:,59).*ALGEBRAIC(:,1)+ALGEBRAIC(:,18); ALGEBRAIC(:,52) = ALGEBRAIC(:,7)+ALGEBRAIC(:,18); ALGEBRAIC(:,48) = CONSTANTS(:,46).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,114) = piecewise({ALGEBRAIC(:,48)==0.00000, CONSTANTS(:,3).*(exp(ALGEBRAIC(:,20)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,52)./( CONSTANTS(:,57).*CONSTANTS(:,58)))) }, ((( CONSTANTS(:,3).*ALGEBRAIC(:,48))./( CONSTANTS(:,57).*CONSTANTS(:,58)))./(exp(ALGEBRAIC(:,48)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - 1.00000)).*(exp(ALGEBRAIC(:,20)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,52)./( CONSTANTS(:,57).*CONSTANTS(:,58))))); ALGEBRAIC(:,116) = ALGEBRAIC(:,114)+ALGEBRAIC(:,112); RATES(:,1) = ALGEBRAIC(:,116); ALGEBRAIC(:,117) = (( (CONSTANTS(:,52)).*ALGEBRAIC(:,104)+ CONSTANTS(:,52).*ALGEBRAIC(:,108)+ CONSTANTS(:,52).*ALGEBRAIC(:,100)+ CONSTANTS(:,52).*ALGEBRAIC(:,96)+ CONSTANTS(:,52).*ALGEBRAIC(:,92)+ CONSTANTS(:,52).*ALGEBRAIC(:,111)) - ALGEBRAIC(:,112)) - ALGEBRAIC(:,114); RATES(:,2) = ALGEBRAIC(:,117); ALGEBRAIC(:,10) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,32).*STATES(:,4)); ALGEBRAIC(:,21) = ALGEBRAIC(:,10)+ CONSTANTS(:,47).*CONSTANTS(:,59).*ALGEBRAIC(:,1)+ALGEBRAIC(:,16); ALGEBRAIC(:,9) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,33).*STATES(:,3)); ALGEBRAIC(:,53) = ALGEBRAIC(:,9)+ALGEBRAIC(:,16); ALGEBRAIC(:,49) = CONSTANTS(:,47).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,115) = piecewise({ALGEBRAIC(:,49)==0.00000, CONSTANTS(:,4).*(exp(ALGEBRAIC(:,21)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,53)./( CONSTANTS(:,57).*CONSTANTS(:,58)))) }, ((( CONSTANTS(:,4).*ALGEBRAIC(:,49))./( CONSTANTS(:,57).*CONSTANTS(:,58)))./(exp(ALGEBRAIC(:,49)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - 1.00000)).*(exp(ALGEBRAIC(:,21)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,53)./( CONSTANTS(:,57).*CONSTANTS(:,58))))); ALGEBRAIC(:,40) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,44).*STATES(:,15))+ CONSTANTS(:,51).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,89) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,45).*STATES(:,16))+ CONSTANTS(:,56).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,90) = CONSTANTS(:,23).*(exp(ALGEBRAIC(:,40)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,89)./( CONSTANTS(:,57).*CONSTANTS(:,58)))); ALGEBRAIC(:,119) = ((ALGEBRAIC(:,74)+ALGEBRAIC(:,62)) - (((( - ALGEBRAIC(:,108)+ALGEBRAIC(:,112)) - ALGEBRAIC(:,112))+ALGEBRAIC(:,115)) - ALGEBRAIC(:,115))) - ALGEBRAIC(:,90); RATES(:,15) = ALGEBRAIC(:,119); ALGEBRAIC(:,22) = ALGEBRAIC(:,10)+ CONSTANTS(:,47).*CONSTANTS(:,59).*ALGEBRAIC(:,1)+ALGEBRAIC(:,18); ALGEBRAIC(:,54) = ALGEBRAIC(:,9)+ALGEBRAIC(:,18); ALGEBRAIC(:,50) = CONSTANTS(:,47).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,118) = piecewise({ALGEBRAIC(:,50)==0.00000, CONSTANTS(:,5).*(exp(ALGEBRAIC(:,22)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,54)./( CONSTANTS(:,57).*CONSTANTS(:,58)))) }, ((( CONSTANTS(:,5).*ALGEBRAIC(:,50))./( CONSTANTS(:,57).*CONSTANTS(:,58)))./(exp(ALGEBRAIC(:,50)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - 1.00000)).*(exp(ALGEBRAIC(:,22)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,54)./( CONSTANTS(:,57).*CONSTANTS(:,58))))); ALGEBRAIC(:,121) = ALGEBRAIC(:,118)+ALGEBRAIC(:,115); RATES(:,3) = ALGEBRAIC(:,121); ALGEBRAIC(:,122) = - ALGEBRAIC(:,115) - ALGEBRAIC(:,118); RATES(:,4) = ALGEBRAIC(:,122); ALGEBRAIC(:,120) = CONSTANTS(:,59).*((((((((((((((((((((((((((((((((((((( CONSTANTS(:,55).*ALGEBRAIC(:,78) - CONSTANTS(:,50).*ALGEBRAIC(:,78))+ CONSTANTS(:,56).*ALGEBRAIC(:,86)) - CONSTANTS(:,51).*ALGEBRAIC(:,86))+ CONSTANTS(:,54).*ALGEBRAIC(:,74)) - CONSTANTS(:,49).*ALGEBRAIC(:,74))+ CONSTANTS(:,55).*ALGEBRAIC(:,82)) - CONSTANTS(:,50).*ALGEBRAIC(:,82))+ CONSTANTS(:,56).*ALGEBRAIC(:,90)) - CONSTANTS(:,51).*ALGEBRAIC(:,90))+ CONSTANTS(:,54).*ALGEBRAIC(:,70)) - CONSTANTS(:,49).*ALGEBRAIC(:,70))+ CONSTANTS(:,53).*ALGEBRAIC(:,66)) - CONSTANTS(:,48).*ALGEBRAIC(:,66))+ CONSTANTS(:,53).*ALGEBRAIC(:,62)) - CONSTANTS(:,48).*ALGEBRAIC(:,62))+ CONSTANTS(:,53).*ALGEBRAIC(:,58)) - CONSTANTS(:,48).*ALGEBRAIC(:,58))+ CONSTANTS(:,56).*ALGEBRAIC(:,88)) - CONSTANTS(:,51).*ALGEBRAIC(:,88))+ CONSTANTS(:,55).*ALGEBRAIC(:,80)) - CONSTANTS(:,50).*ALGEBRAIC(:,80))+ CONSTANTS(:,54).*ALGEBRAIC(:,72)) - CONSTANTS(:,49).*ALGEBRAIC(:,72))+ CONSTANTS(:,56).*ALGEBRAIC(:,84)) - CONSTANTS(:,51).*ALGEBRAIC(:,84))+ CONSTANTS(:,55).*ALGEBRAIC(:,76)) - CONSTANTS(:,50).*ALGEBRAIC(:,76))+ CONSTANTS(:,54).*ALGEBRAIC(:,68)) - CONSTANTS(:,49).*ALGEBRAIC(:,68))+ CONSTANTS(:,53).*ALGEBRAIC(:,64)) - CONSTANTS(:,48).*ALGEBRAIC(:,64))+ CONSTANTS(:,53).*ALGEBRAIC(:,60)) - CONSTANTS(:,48).*ALGEBRAIC(:,60))+ CONSTANTS(:,53).*ALGEBRAIC(:,56)) - CONSTANTS(:,48).*ALGEBRAIC(:,56)) - ( CONSTANTS(:,46).*ALGEBRAIC(:,112)+ CONSTANTS(:,46).*ALGEBRAIC(:,114))) - ( CONSTANTS(:,47).*ALGEBRAIC(:,115)+ CONSTANTS(:,47).*ALGEBRAIC(:,118))); RATES(:,17) = ALGEBRAIC(:,120); ALGEBRAIC(:,123) = ((ALGEBRAIC(:,82)+ALGEBRAIC(:,66)) - (((( - ALGEBRAIC(:,111)+ALGEBRAIC(:,114)) - ALGEBRAIC(:,114))+ALGEBRAIC(:,118)) - ALGEBRAIC(:,118)))+ALGEBRAIC(:,90); RATES(:,16) = ALGEBRAIC(:,123); RATES = RATES'; end % Calculate algebraic variables function ALGEBRAIC = computeAlgebraic(ALGEBRAIC, CONSTANTS, STATES, VOI) statesSize = size(STATES); statesColumnCount = statesSize(2); if ( statesColumnCount == 1) STATES = STATES'; utilOnes = 1; else statesRowCount = statesSize(1); utilOnes = ones(statesRowCount, 1); end ALGEBRAIC(:,11) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,34).*STATES(:,5)); ALGEBRAIC(:,41) = ALGEBRAIC(:,11); ALGEBRAIC(:,8) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,30).*STATES(:,2)); ALGEBRAIC(:,91) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,40).*STATES(:,11))+ CONSTANTS(:,52).*ALGEBRAIC(:,8); ALGEBRAIC(:,92) = CONSTANTS(:,24).*(exp(ALGEBRAIC(:,41)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,91)./( CONSTANTS(:,57).*CONSTANTS(:,58)))); ALGEBRAIC(:,1) = STATES(:,17)./CONSTANTS(:,1); ALGEBRAIC(:,23) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,34).*STATES(:,5))+ CONSTANTS(:,48).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,55) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,37).*STATES(:,8))+ CONSTANTS(:,53).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,56) = CONSTANTS(:,6).*(exp(ALGEBRAIC(:,23)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,55)./( CONSTANTS(:,57).*CONSTANTS(:,58)))); ALGEBRAIC(:,29) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,34).*STATES(:,5))+ CONSTANTS(:,49).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,67) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,35).*STATES(:,6))+ CONSTANTS(:,54).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,68) = CONSTANTS(:,12).*(exp(ALGEBRAIC(:,29)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,67)./( CONSTANTS(:,57).*CONSTANTS(:,58)))); ALGEBRAIC(:,33) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,34).*STATES(:,5))+ CONSTANTS(:,50).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,75) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,36).*STATES(:,7))+ CONSTANTS(:,55).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,76) = CONSTANTS(:,16).*(exp(ALGEBRAIC(:,33)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,75)./( CONSTANTS(:,57).*CONSTANTS(:,58)))); ALGEBRAIC(:,94) = (( - ALGEBRAIC(:,56) - ALGEBRAIC(:,68)) - ALGEBRAIC(:,76)) - ALGEBRAIC(:,92); ALGEBRAIC(:,24) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,40).*STATES(:,11))+ CONSTANTS(:,48).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,57) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,43).*STATES(:,14))+ CONSTANTS(:,53).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,58) = CONSTANTS(:,9).*(exp(ALGEBRAIC(:,24)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,57)./( CONSTANTS(:,57).*CONSTANTS(:,58)))); ALGEBRAIC(:,30) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,40).*STATES(:,11))+ CONSTANTS(:,49).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,69) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,41).*STATES(:,12))+ CONSTANTS(:,54).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,70) = CONSTANTS(:,14).*(exp(ALGEBRAIC(:,30)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,69)./( CONSTANTS(:,57).*CONSTANTS(:,58)))); ALGEBRAIC(:,34) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,40).*STATES(:,11))+ CONSTANTS(:,50).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,77) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,42).*STATES(:,13))+ CONSTANTS(:,55).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,78) = CONSTANTS(:,18).*(exp(ALGEBRAIC(:,34)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,77)./( CONSTANTS(:,57).*CONSTANTS(:,58)))); ALGEBRAIC(:,95) = (( - ALGEBRAIC(:,58) - ALGEBRAIC(:,70)) - ALGEBRAIC(:,78)) - - ALGEBRAIC(:,92); ALGEBRAIC(:,12) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,35).*STATES(:,6)); ALGEBRAIC(:,42) = ALGEBRAIC(:,12); ALGEBRAIC(:,93) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,41).*STATES(:,12))+ CONSTANTS(:,52).*ALGEBRAIC(:,8); ALGEBRAIC(:,96) = CONSTANTS(:,26).*(exp(ALGEBRAIC(:,42)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,93)./( CONSTANTS(:,57).*CONSTANTS(:,58)))); ALGEBRAIC(:,25) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,35).*STATES(:,6))+ CONSTANTS(:,48).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,59) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,38).*STATES(:,9))+ CONSTANTS(:,53).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,60) = CONSTANTS(:,7).*(exp(ALGEBRAIC(:,25)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,59)./( CONSTANTS(:,57).*CONSTANTS(:,58)))); ALGEBRAIC(:,37) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,35).*STATES(:,6))+ CONSTANTS(:,51).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,83) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,36).*STATES(:,7))+ CONSTANTS(:,56).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,84) = CONSTANTS(:,20).*(exp(ALGEBRAIC(:,37)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,83)./( CONSTANTS(:,57).*CONSTANTS(:,58)))); ALGEBRAIC(:,98) = (( - ALGEBRAIC(:,60)+ALGEBRAIC(:,68)) - ALGEBRAIC(:,96)) - ALGEBRAIC(:,84); ALGEBRAIC(:,26) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,41).*STATES(:,12))+ CONSTANTS(:,48).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,61) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,44).*STATES(:,15))+ CONSTANTS(:,53).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,62) = CONSTANTS(:,10).*(exp(ALGEBRAIC(:,26)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,61)./( CONSTANTS(:,57).*CONSTANTS(:,58)))); ALGEBRAIC(:,38) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,41).*STATES(:,12))+ CONSTANTS(:,51).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,85) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,42).*STATES(:,13))+ CONSTANTS(:,56).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,86) = CONSTANTS(:,22).*(exp(ALGEBRAIC(:,38)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,85)./( CONSTANTS(:,57).*CONSTANTS(:,58)))); ALGEBRAIC(:,99) = (( - ALGEBRAIC(:,62)+ALGEBRAIC(:,70)) - - ALGEBRAIC(:,96)) - ALGEBRAIC(:,86); ALGEBRAIC(:,13) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,36).*STATES(:,7)); ALGEBRAIC(:,43) = ALGEBRAIC(:,13); ALGEBRAIC(:,97) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,42).*STATES(:,13))+ CONSTANTS(:,52).*ALGEBRAIC(:,8); ALGEBRAIC(:,100) = CONSTANTS(:,28).*(exp(ALGEBRAIC(:,43)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,97)./( CONSTANTS(:,57).*CONSTANTS(:,58)))); ALGEBRAIC(:,27) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,36).*STATES(:,7))+ CONSTANTS(:,48).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,63) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,39).*STATES(:,10))+ CONSTANTS(:,53).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,64) = CONSTANTS(:,8).*(exp(ALGEBRAIC(:,27)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,63)./( CONSTANTS(:,57).*CONSTANTS(:,58)))); ALGEBRAIC(:,102) = (( - ALGEBRAIC(:,64)+ALGEBRAIC(:,76)) - ALGEBRAIC(:,100))+ALGEBRAIC(:,84); ALGEBRAIC(:,28) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,42).*STATES(:,13))+ CONSTANTS(:,48).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,65) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,45).*STATES(:,16))+ CONSTANTS(:,53).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,66) = CONSTANTS(:,11).*(exp(ALGEBRAIC(:,28)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,65)./( CONSTANTS(:,57).*CONSTANTS(:,58)))); ALGEBRAIC(:,103) = (( - ALGEBRAIC(:,66)+ALGEBRAIC(:,78)) - - ALGEBRAIC(:,100))+ALGEBRAIC(:,86); ALGEBRAIC(:,14) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,37).*STATES(:,8)); ALGEBRAIC(:,44) = ALGEBRAIC(:,14); ALGEBRAIC(:,101) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,43).*STATES(:,14))+ CONSTANTS(:,52).*ALGEBRAIC(:,8); ALGEBRAIC(:,104) = CONSTANTS(:,25).*(exp(ALGEBRAIC(:,44)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,101)./( CONSTANTS(:,57).*CONSTANTS(:,58)))); ALGEBRAIC(:,31) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,37).*STATES(:,8))+ CONSTANTS(:,49).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,71) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,38).*STATES(:,9))+ CONSTANTS(:,54).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,72) = CONSTANTS(:,13).*(exp(ALGEBRAIC(:,31)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,71)./( CONSTANTS(:,57).*CONSTANTS(:,58)))); ALGEBRAIC(:,35) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,37).*STATES(:,8))+ CONSTANTS(:,50).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,79) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,39).*STATES(:,10))+ CONSTANTS(:,55).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,80) = CONSTANTS(:,17).*(exp(ALGEBRAIC(:,35)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,79)./( CONSTANTS(:,57).*CONSTANTS(:,58)))); ALGEBRAIC(:,106) = (( - ALGEBRAIC(:,80)+ALGEBRAIC(:,56)) - ALGEBRAIC(:,72)) - ALGEBRAIC(:,104); ALGEBRAIC(:,32) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,43).*STATES(:,14))+ CONSTANTS(:,49).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,73) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,44).*STATES(:,15))+ CONSTANTS(:,54).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,74) = CONSTANTS(:,15).*(exp(ALGEBRAIC(:,32)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,73)./( CONSTANTS(:,57).*CONSTANTS(:,58)))); ALGEBRAIC(:,36) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,43).*STATES(:,14))+ CONSTANTS(:,50).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,81) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,45).*STATES(:,16))+ CONSTANTS(:,55).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,82) = CONSTANTS(:,19).*(exp(ALGEBRAIC(:,36)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,81)./( CONSTANTS(:,57).*CONSTANTS(:,58)))); ALGEBRAIC(:,107) = (( - ALGEBRAIC(:,82)+ALGEBRAIC(:,58)) - ALGEBRAIC(:,74)) - - ALGEBRAIC(:,104); ALGEBRAIC(:,15) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,38).*STATES(:,9)); ALGEBRAIC(:,45) = ALGEBRAIC(:,15); ALGEBRAIC(:,105) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,44).*STATES(:,15))+ CONSTANTS(:,52).*ALGEBRAIC(:,8); ALGEBRAIC(:,108) = CONSTANTS(:,27).*(exp(ALGEBRAIC(:,45)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,105)./( CONSTANTS(:,57).*CONSTANTS(:,58)))); ALGEBRAIC(:,39) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,38).*STATES(:,9))+ CONSTANTS(:,51).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,87) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,39).*STATES(:,10))+ CONSTANTS(:,56).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,88) = CONSTANTS(:,21).*(exp(ALGEBRAIC(:,39)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,87)./( CONSTANTS(:,57).*CONSTANTS(:,58)))); ALGEBRAIC(:,110) = ((ALGEBRAIC(:,72)+ALGEBRAIC(:,60)) - ALGEBRAIC(:,108)) - ALGEBRAIC(:,88); ALGEBRAIC(:,17) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,39).*STATES(:,10)); ALGEBRAIC(:,46) = ALGEBRAIC(:,17); ALGEBRAIC(:,109) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,45).*STATES(:,16))+ CONSTANTS(:,52).*ALGEBRAIC(:,8); ALGEBRAIC(:,111) = CONSTANTS(:,29).*(exp(ALGEBRAIC(:,46)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,109)./( CONSTANTS(:,57).*CONSTANTS(:,58)))); ALGEBRAIC(:,113) = ((ALGEBRAIC(:,80)+ALGEBRAIC(:,64)) - ALGEBRAIC(:,111))+ALGEBRAIC(:,88); ALGEBRAIC(:,16) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,44).*STATES(:,15)); ALGEBRAIC(:,19) = ALGEBRAIC(:,8)+ CONSTANTS(:,46).*CONSTANTS(:,59).*ALGEBRAIC(:,1)+ALGEBRAIC(:,16); ALGEBRAIC(:,7) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,31).*STATES(:,1)); ALGEBRAIC(:,51) = ALGEBRAIC(:,7)+ALGEBRAIC(:,16); ALGEBRAIC(:,47) = CONSTANTS(:,46).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,112) = piecewise({ALGEBRAIC(:,47)==0.00000, CONSTANTS(:,2).*(exp(ALGEBRAIC(:,19)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,51)./( CONSTANTS(:,57).*CONSTANTS(:,58)))) }, ((( CONSTANTS(:,2).*ALGEBRAIC(:,47))./( CONSTANTS(:,57).*CONSTANTS(:,58)))./(exp(ALGEBRAIC(:,47)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - 1.00000)).*(exp(ALGEBRAIC(:,19)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,51)./( CONSTANTS(:,57).*CONSTANTS(:,58))))); ALGEBRAIC(:,18) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,45).*STATES(:,16)); ALGEBRAIC(:,20) = ALGEBRAIC(:,8)+ CONSTANTS(:,46).*CONSTANTS(:,59).*ALGEBRAIC(:,1)+ALGEBRAIC(:,18); ALGEBRAIC(:,52) = ALGEBRAIC(:,7)+ALGEBRAIC(:,18); ALGEBRAIC(:,48) = CONSTANTS(:,46).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,114) = piecewise({ALGEBRAIC(:,48)==0.00000, CONSTANTS(:,3).*(exp(ALGEBRAIC(:,20)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,52)./( CONSTANTS(:,57).*CONSTANTS(:,58)))) }, ((( CONSTANTS(:,3).*ALGEBRAIC(:,48))./( CONSTANTS(:,57).*CONSTANTS(:,58)))./(exp(ALGEBRAIC(:,48)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - 1.00000)).*(exp(ALGEBRAIC(:,20)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,52)./( CONSTANTS(:,57).*CONSTANTS(:,58))))); ALGEBRAIC(:,116) = ALGEBRAIC(:,114)+ALGEBRAIC(:,112); ALGEBRAIC(:,117) = (( (CONSTANTS(:,52)).*ALGEBRAIC(:,104)+ CONSTANTS(:,52).*ALGEBRAIC(:,108)+ CONSTANTS(:,52).*ALGEBRAIC(:,100)+ CONSTANTS(:,52).*ALGEBRAIC(:,96)+ CONSTANTS(:,52).*ALGEBRAIC(:,92)+ CONSTANTS(:,52).*ALGEBRAIC(:,111)) - ALGEBRAIC(:,112)) - ALGEBRAIC(:,114); ALGEBRAIC(:,10) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,32).*STATES(:,4)); ALGEBRAIC(:,21) = ALGEBRAIC(:,10)+ CONSTANTS(:,47).*CONSTANTS(:,59).*ALGEBRAIC(:,1)+ALGEBRAIC(:,16); ALGEBRAIC(:,9) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,33).*STATES(:,3)); ALGEBRAIC(:,53) = ALGEBRAIC(:,9)+ALGEBRAIC(:,16); ALGEBRAIC(:,49) = CONSTANTS(:,47).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,115) = piecewise({ALGEBRAIC(:,49)==0.00000, CONSTANTS(:,4).*(exp(ALGEBRAIC(:,21)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,53)./( CONSTANTS(:,57).*CONSTANTS(:,58)))) }, ((( CONSTANTS(:,4).*ALGEBRAIC(:,49))./( CONSTANTS(:,57).*CONSTANTS(:,58)))./(exp(ALGEBRAIC(:,49)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - 1.00000)).*(exp(ALGEBRAIC(:,21)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,53)./( CONSTANTS(:,57).*CONSTANTS(:,58))))); ALGEBRAIC(:,40) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,44).*STATES(:,15))+ CONSTANTS(:,51).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,89) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,45).*STATES(:,16))+ CONSTANTS(:,56).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,90) = CONSTANTS(:,23).*(exp(ALGEBRAIC(:,40)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,89)./( CONSTANTS(:,57).*CONSTANTS(:,58)))); ALGEBRAIC(:,119) = ((ALGEBRAIC(:,74)+ALGEBRAIC(:,62)) - (((( - ALGEBRAIC(:,108)+ALGEBRAIC(:,112)) - ALGEBRAIC(:,112))+ALGEBRAIC(:,115)) - ALGEBRAIC(:,115))) - ALGEBRAIC(:,90); ALGEBRAIC(:,22) = ALGEBRAIC(:,10)+ CONSTANTS(:,47).*CONSTANTS(:,59).*ALGEBRAIC(:,1)+ALGEBRAIC(:,18); ALGEBRAIC(:,54) = ALGEBRAIC(:,9)+ALGEBRAIC(:,18); ALGEBRAIC(:,50) = CONSTANTS(:,47).*CONSTANTS(:,59).*ALGEBRAIC(:,1); ALGEBRAIC(:,118) = piecewise({ALGEBRAIC(:,50)==0.00000, CONSTANTS(:,5).*(exp(ALGEBRAIC(:,22)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,54)./( CONSTANTS(:,57).*CONSTANTS(:,58)))) }, ((( CONSTANTS(:,5).*ALGEBRAIC(:,50))./( CONSTANTS(:,57).*CONSTANTS(:,58)))./(exp(ALGEBRAIC(:,50)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - 1.00000)).*(exp(ALGEBRAIC(:,22)./( CONSTANTS(:,57).*CONSTANTS(:,58))) - exp(ALGEBRAIC(:,54)./( CONSTANTS(:,57).*CONSTANTS(:,58))))); ALGEBRAIC(:,121) = ALGEBRAIC(:,118)+ALGEBRAIC(:,115); ALGEBRAIC(:,122) = - ALGEBRAIC(:,115) - ALGEBRAIC(:,118); ALGEBRAIC(:,120) = CONSTANTS(:,59).*((((((((((((((((((((((((((((((((((((( CONSTANTS(:,55).*ALGEBRAIC(:,78) - CONSTANTS(:,50).*ALGEBRAIC(:,78))+ CONSTANTS(:,56).*ALGEBRAIC(:,86)) - CONSTANTS(:,51).*ALGEBRAIC(:,86))+ CONSTANTS(:,54).*ALGEBRAIC(:,74)) - CONSTANTS(:,49).*ALGEBRAIC(:,74))+ CONSTANTS(:,55).*ALGEBRAIC(:,82)) - CONSTANTS(:,50).*ALGEBRAIC(:,82))+ CONSTANTS(:,56).*ALGEBRAIC(:,90)) - CONSTANTS(:,51).*ALGEBRAIC(:,90))+ CONSTANTS(:,54).*ALGEBRAIC(:,70)) - CONSTANTS(:,49).*ALGEBRAIC(:,70))+ CONSTANTS(:,53).*ALGEBRAIC(:,66)) - CONSTANTS(:,48).*ALGEBRAIC(:,66))+ CONSTANTS(:,53).*ALGEBRAIC(:,62)) - CONSTANTS(:,48).*ALGEBRAIC(:,62))+ CONSTANTS(:,53).*ALGEBRAIC(:,58)) - CONSTANTS(:,48).*ALGEBRAIC(:,58))+ CONSTANTS(:,56).*ALGEBRAIC(:,88)) - CONSTANTS(:,51).*ALGEBRAIC(:,88))+ CONSTANTS(:,55).*ALGEBRAIC(:,80)) - CONSTANTS(:,50).*ALGEBRAIC(:,80))+ CONSTANTS(:,54).*ALGEBRAIC(:,72)) - CONSTANTS(:,49).*ALGEBRAIC(:,72))+ CONSTANTS(:,56).*ALGEBRAIC(:,84)) - CONSTANTS(:,51).*ALGEBRAIC(:,84))+ CONSTANTS(:,55).*ALGEBRAIC(:,76)) - CONSTANTS(:,50).*ALGEBRAIC(:,76))+ CONSTANTS(:,54).*ALGEBRAIC(:,68)) - CONSTANTS(:,49).*ALGEBRAIC(:,68))+ CONSTANTS(:,53).*ALGEBRAIC(:,64)) - CONSTANTS(:,48).*ALGEBRAIC(:,64))+ CONSTANTS(:,53).*ALGEBRAIC(:,60)) - CONSTANTS(:,48).*ALGEBRAIC(:,60))+ CONSTANTS(:,53).*ALGEBRAIC(:,56)) - CONSTANTS(:,48).*ALGEBRAIC(:,56)) - ( CONSTANTS(:,46).*ALGEBRAIC(:,112)+ CONSTANTS(:,46).*ALGEBRAIC(:,114))) - ( CONSTANTS(:,47).*ALGEBRAIC(:,115)+ CONSTANTS(:,47).*ALGEBRAIC(:,118))); ALGEBRAIC(:,123) = ((ALGEBRAIC(:,82)+ALGEBRAIC(:,66)) - (((( - ALGEBRAIC(:,111)+ALGEBRAIC(:,114)) - ALGEBRAIC(:,114))+ALGEBRAIC(:,118)) - ALGEBRAIC(:,118)))+ALGEBRAIC(:,90); ALGEBRAIC(:,2) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,40).*STATES(:,11)); ALGEBRAIC(:,3) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,41).*STATES(:,12)); ALGEBRAIC(:,4) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,42).*STATES(:,13)); ALGEBRAIC(:,5) = CONSTANTS(:,57).*CONSTANTS(:,58).*log( CONSTANTS(:,43).*STATES(:,14)); ALGEBRAIC(:,6) = STATES(:,1)+STATES(:,2)+STATES(:,11)+STATES(:,12)+STATES(:,13)+STATES(:,14)+STATES(:,15)+STATES(:,16); end % Compute result of a piecewise function function x = piecewise(cases, default) set = [0]; for i = 1:2:length(cases) if (length(cases{i+1}) == 1) x(cases{i} & ~set,:) = cases{i+1}; else x(cases{i} & ~set,:) = cases{i+1}(cases{i} & ~set); end set = set | cases{i}; if(set), break, end end if (length(default) == 1) x(~set,:) = default; else x(~set,:) = default(~set); end end % Pad out or shorten strings to a set length function strout = strpad(strin) req_length = 160; insize = size(strin,2); if insize > req_length strout = strin(1:req_length); else strout = [strin, blanks(req_length - insize)]; end end