/*
   There are a total of 0 entries in the algebraic variable array.
   There are a total of 13 entries in each of the rate and state variable arrays.
   There are a total of 24 entries in the constant variable array.
 */
/*
 * VOI is t in component environment (s).
 * CONSTANTS[0] is kf1 in component EGF_EGFRtoEGFEGFR (per_um_s).
 * CONSTANTS[1] is kb1 in component EGF_EGFRtoEGFEGFR (per_s).
 * CONSTANTS[2] is kf2 in component EGF_EGFRtoEGFEGFR (per_s).
 * CONSTANTS[3] is kb2 in component EGF_EGFRtoEGFEGFR (per_s).
 * STATES[0] is EGF in component EGF_EGFRtoEGFEGFR (um).
 * STATES[1] is EGFR in component EGF_EGFRtoEGFEGFR (um).
 * STATES[2] is EGF_EGFR in component EGF_EGFRtoEGFEGFR (um).
 * STATES[3] is EGF_EGFR_INTERNAL in component EGF_EGFRtoEGFEGFR (um).
 * CONSTANTS[4] is km3 in component SHCtoSHCStar (um).
 * CONSTANTS[5] is kf4 in component SHCtoSHCStar (per_s).
 * CONSTANTS[6] is kb4 in component SHCtoSHCStar (per_s).
 * CONSTANTS[7] is kf5 in component SHCtoSHCStar (per_um_s).
 * CONSTANTS[8] is kb5 in component SHCtoSHCStar (per_s).
 * CONSTANTS[9] is kf6 in component SHCtoSHCStar (per_um_s).
 * CONSTANTS[10] is kb6 in component SHCtoSHCStar (per_s).
 * CONSTANTS[11] is kf8 in component SHCtoSHCStar (per_s).
 * CONSTANTS[12] is kb8 in component SHCtoSHCStar (per_s).
 * CONSTANTS[13] is kf10 in component SHCtoSHCStar (per_um_s).
 * CONSTANTS[14] is kb10 in component SHCtoSHCStar (per_s).
 * CONSTANTS[15] is km7 in component SHCtoSHCStar (um).
 * CONSTANTS[16] is km9 in component SHCtoSHCStar (um).
 * CONSTANTS[17] is Vmax7 in component SHCtoSHCStar (per_s).
 * CONSTANTS[18] is Vmax3 in component SHCtoSHCStar (per_s).
 * CONSTANTS[19] is Vmax9 in component SHCtoSHCStar (per_s).
 * STATES[4] is SHC in component SHCtoSHCStar (um).
 * STATES[5] is SHCstar in component SHCtoSHCStar (um).
 * STATES[6] is SHCstar_SOS_GRB2 in component SHCtoSHCStar (um).
 * STATES[7] is SOS_GRB2 in component SHCtoSHCStar (um).
 * STATES[8] is SOS in component SHCtoSHCStar (um).
 * CONSTANTS[20] is GRB2 in component SHCtoSHCStar (um).
 * CONSTANTS[21] is MAPK in component SHCtoSHCStar (um).
 * STATES[9] is SOSstar in component SHCtoSHCStar (um).
 * STATES[10] is SOSstar_GRB2 in component SHCtoSHCStar (um).
 * CONSTANTS[22] is km7 in component GDPrasToGTPras (um).
 * CONSTANTS[23] is Vmax7 in component GDPrasToGTPras (per_s).
 * STATES[11] is GDP_ras in component GDPrasToGTPras (um).
 * STATES[12] is GTP_ras in component GDPrasToGTPras (um).
 * RATES[0] is d/dt EGF in component EGF_EGFRtoEGFEGFR (um).
 * RATES[1] is d/dt EGFR in component EGF_EGFRtoEGFEGFR (um).
 * RATES[2] is d/dt EGF_EGFR in component EGF_EGFRtoEGFEGFR (um).
 * RATES[3] is d/dt EGF_EGFR_INTERNAL in component EGF_EGFRtoEGFEGFR (um).
 * RATES[5] is d/dt SHCstar in component SHCtoSHCStar (um).
 * RATES[4] is d/dt SHC in component SHCtoSHCStar (um).
 * RATES[6] is d/dt SHCstar_SOS_GRB2 in component SHCtoSHCStar (um).
 * RATES[7] is d/dt SOS_GRB2 in component SHCtoSHCStar (um).
 * RATES[8] is d/dt SOS in component SHCtoSHCStar (um).
 * RATES[9] is d/dt SOSstar in component SHCtoSHCStar (um).
 * RATES[10] is d/dt SOSstar_GRB2 in component SHCtoSHCStar (um).
 * RATES[11] is d/dt GDP_ras in component GDPrasToGTPras (um).
 * RATES[12] is d/dt GTP_ras in component GDPrasToGTPras (um).
 * There are a total of 0 condition variables.
 */
void
initConsts(double* CONSTANTS, double* RATES, double *STATES)
{
CONSTANTS[0] = 0.000007;
CONSTANTS[1] = 0.25;
CONSTANTS[2] = 0.002;
CONSTANTS[3] = 0.00033;
STATES[0] = 0.16667;
STATES[1] = 0.16667;
STATES[2] = 0;
STATES[3] = 0;
CONSTANTS[4] = 0.83333333333;
CONSTANTS[5] = 0.0016667;
CONSTANTS[6] = 0;
CONSTANTS[7] = 0.000000041667;
CONSTANTS[8] = 0.0168;
CONSTANTS[9] = 0.0000008333;
CONSTANTS[10] = 0.1;
CONSTANTS[11] = 0.001;
CONSTANTS[12] = 0;
CONSTANTS[13] = 0.000000041667;
CONSTANTS[14] = 0.0168;
CONSTANTS[15] = 0.40404;
CONSTANTS[16] = 2.564166667;
CONSTANTS[17] = 0.02;
CONSTANTS[18] = 0.2;
CONSTANTS[19] = 10;
STATES[4] = 0.5;
STATES[5] = 0;
STATES[6] = 0;
STATES[7] = 0;
STATES[8] = 0.1;
CONSTANTS[20] = 1;
CONSTANTS[21] = 0.36;
STATES[9] = 0;
STATES[10] = 0;
CONSTANTS[22] = 0.50505;
CONSTANTS[23] = 0.02;
STATES[11] = 1;
STATES[12] = 0;
RATES[0] = 0.1001;
RATES[1] = 0.1001;
RATES[2] = 0.1001;
RATES[3] = 0.1001;
RATES[5] = 0.1001;
RATES[4] = 0.1001;
RATES[6] = 0.1001;
RATES[7] = 0.1001;
RATES[8] = 0.1001;
RATES[9] = 0.1001;
RATES[10] = 0.1001;
RATES[11] = 0.1001;
RATES[12] = 0.1001;
}
void
computeResiduals(double VOI, double* CONSTANTS, double* RATES, double* OLDRATES, double* STATES,
                 double* OLDSTATES, double* ALGEBRAIC, double* CONDVARS)
{
resid[0] = RATES[0] -  - CONSTANTS[0]*STATES[0]*STATES[1]+ CONSTANTS[1]*STATES[2];
resid[1] = RATES[1] -  - CONSTANTS[0]*STATES[0]*STATES[1]+ CONSTANTS[1]*STATES[2];
resid[2] = RATES[2] - (( CONSTANTS[0]*STATES[0]*STATES[1] -  CONSTANTS[1]*STATES[2]) -  CONSTANTS[2]*STATES[2])+ CONSTANTS[3]*STATES[3];
resid[3] = RATES[3] -  CONSTANTS[2]*STATES[2] -  CONSTANTS[3]*STATES[3];
resid[4] = RATES[5] - (( STATES[2]*CONSTANTS[18]*STATES[4])/(CONSTANTS[4]+STATES[4]) -  CONSTANTS[9]*STATES[5]*STATES[7])+ CONSTANTS[10]*STATES[6];
resid[5] = RATES[4] - ( CONSTANTS[5]*STATES[5] -  CONSTANTS[6]*STATES[4]) - ( STATES[2]*CONSTANTS[18]*STATES[4])/(CONSTANTS[4]+STATES[4]);
resid[6] = RATES[6] -  CONSTANTS[9]*STATES[5]*STATES[7] -  CONSTANTS[10]*STATES[6];
resid[7] = RATES[7] - (( - CONSTANTS[9]*STATES[5]*STATES[7]+ CONSTANTS[10]*STATES[6]) -  CONSTANTS[8]*STATES[7])+ CONSTANTS[7]*STATES[8]*CONSTANTS[20];
resid[8] = RATES[8] - ( CONSTANTS[11]*STATES[9] -  CONSTANTS[12]*STATES[8]) - ( CONSTANTS[21]*CONSTANTS[19]*STATES[8])/(CONSTANTS[16]+STATES[8]);
resid[9] = RATES[9] - (( - CONSTANTS[11]*STATES[9]+ CONSTANTS[12]*STATES[8]+( CONSTANTS[21]*CONSTANTS[19]*STATES[8])/(CONSTANTS[16]+STATES[8])) -  CONSTANTS[13]*STATES[9]*CONSTANTS[20])+ CONSTANTS[14]*STATES[10];
resid[10] = RATES[10] -  CONSTANTS[13]*STATES[9]*CONSTANTS[20] -  CONSTANTS[14]*STATES[10];
resid[11] = RATES[11] - ( - STATES[10]*CONSTANTS[23]*STATES[11])/(CONSTANTS[22]+STATES[11]);
resid[12] = RATES[12] - ( STATES[10]*CONSTANTS[23]*STATES[11])/(CONSTANTS[22]+STATES[11]);
}
void
computeVariables(double VOI, double* CONSTANTS, double* RATES, double* STATES, double* ALGEBRAIC)
{
}
void
computeEssentialVariables(double VOI, double* CONSTANTS, double* RATES, double* STATES, double* ALGEBRAIC)
{
}
void
getStateInformation(double* SI)
{
SI[0] = 1.0;
SI[1] = 1.0;
SI[2] = 1.0;
SI[3] = 1.0;
SI[4] = 1.0;
SI[5] = 1.0;
SI[6] = 1.0;
SI[7] = 1.0;
SI[8] = 1.0;
SI[9] = 1.0;
SI[10] = 1.0;
SI[11] = 1.0;
SI[12] = 1.0;
}
void
computeRoots(double VOI, double* CONSTANTS, double* RATES, double* OLDRATES, double* STATES,
             double* OLDSTATES, double* ALGEBRAIC, double* CONDVARS)
{
}