Location: VPH-MIP case study on CellML @ 58e44de10bed / components / default-variable-values.xml

Author:
David Nickerson <nickerso@users.sourceforge.net>
Date:
2012-10-05 15:20:03+13:00
Desc:
updating documentation to better reflect the VPH-MIP slides and mention how to reproduce the simulation results; adding plot of gating variables added to the SED-ML
Permanent Source URI:
http://models.cellml.org/w/andre/VPH-MIP/rawfile/58e44de10bed7fbc87fd1d437f3001c7b653a738/components/default-variable-values.xml

<?xml version="1.0" encoding="iso-8859-1"?>
<model xmlns="http://www.cellml.org/cellml/1.1#" xmlns:cellml="http://www.cellml.org/cellml/1.1#" xmlns:xlink="http://www.w3.org/1999/xlink" name="variable_values_model">
  
  <import xlink:href="units.xml">
    <units name="ms" units_ref="ms"/>
    <units name="mV" units_ref="mV"/>
    <units name="uA_per_cmsq" units_ref="uA_per_cmsq"/>
    <units name="mS_per_cmsq" units_ref="mS_per_cmsq"/>
    <units name="uF_per_cmsq" units_ref="uF_per_cmsq"/>
  </import>
  <component name="parameters">
    <variable name="VK" public_interface="out" private_interface="out" units="mV" initial_value="12.0"/>
    <variable name="VNa" public_interface="out" private_interface="out" units="mV" initial_value="-115.0"/>
    <variable name="Vleak" public_interface="out" private_interface="out" units="mV" initial_value="-10.613"/>
    <variable name="gK_max" public_interface="out" private_interface="out" units="mS_per_cmsq" initial_value="36.0"/>
    <variable name="gNa_max" public_interface="out" private_interface="out" units="mS_per_cmsq" initial_value="120.0"/>
    <variable name="gleak_max" public_interface="out" private_interface="out" units="mS_per_cmsq" initial_value="0.3"/>
    <variable name="Cm" public_interface="out" private_interface="out" units="uF_per_cmsq" initial_value="1.0"/>
  </component>
  <component name="initial_conditions">
    <variable name="V_initial" public_interface="out" private_interface="out" units="mV" initial_value="0.0"/>
    <variable name="n_initial" public_interface="out" private_interface="out" units="dimensionless" initial_value="0.315"/>
    <variable name="m_initial" public_interface="out" private_interface="out" units="dimensionless" initial_value="0.042"/>
    <variable name="h_initial" public_interface="out" private_interface="out" units="dimensionless" initial_value="0.608"/>
  </component>
</model>