Location: Bifurcation analysis of the regulatory modules of the mammalian G1/S transition @ 5f3e1e22f343 / swat_2004.cellml

Author:
Hanne Nielsen <hnie010@aucklanduni.ac.nz>
Date:
2011-04-19 10:38:49+12:00
Desc:
Added images in ai svg and png format
Permanent Source URI:
http://models.cellml.org/w/hnielsen/swat_2004/rawfile/5f3e1e22f34384fb3fbea175a88387632d8fcd8d/swat_2004.cellml

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This CellML file was generated on 18/03/2011 at 4:17:40 at p.m. using:

COR (0.9.31.1409) 
Copyright 2002-2011 Dr Alan Garny
http://cor.physiol.ox.ac.uk/ - cor@physiol.ox.ac.uk

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http://www.cellml.org/
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   </component>
   <connection xmlns="http://www.cellml.org/cellml/1.0#">
      <map_components component_1="environment" component_2="pRB"/>
      <map_variables variable_1="time" variable_2="time"/>
   </connection>
   <connection xmlns="http://www.cellml.org/cellml/1.0#">
      <map_components component_1="environment" component_2="E2F1"/>
      <map_variables variable_1="time" variable_2="time"/>
   </connection>
   <connection xmlns="http://www.cellml.org/cellml/1.0#">
      <map_components component_1="environment" component_2="CycDi"/>
      <map_variables variable_1="time" variable_2="time"/>
   </connection>
   <connection xmlns="http://www.cellml.org/cellml/1.0#">
      <map_components component_1="environment" component_2="CycDa"/>
      <map_variables variable_1="time" variable_2="time"/>
   </connection>
   <connection xmlns="http://www.cellml.org/cellml/1.0#">
      <map_components component_1="environment" component_2="AP1"/>
      <map_variables variable_1="time" variable_2="time"/>
   </connection>
   <connection xmlns="http://www.cellml.org/cellml/1.0#">
      <map_components component_1="environment" component_2="pRBp"/>
      <map_variables variable_1="time" variable_2="time"/>
   </connection>
   <connection xmlns="http://www.cellml.org/cellml/1.0#">
      <map_components component_1="environment" component_2="pRBpp"/>
      <map_variables variable_1="time" variable_2="time"/>
   </connection>
   <connection xmlns="http://www.cellml.org/cellml/1.0#">
      <map_components component_1="environment" component_2="CycEi"/>
      <map_variables variable_1="time" variable_2="time"/>
   </connection>
   <connection xmlns="http://www.cellml.org/cellml/1.0#">
      <map_components component_1="environment" component_2="CycEa"/>
      <map_variables variable_1="time" variable_2="time"/>
   </connection>
   <connection xmlns="http://www.cellml.org/cellml/1.0#">
      <map_components component_1="pRB" component_2="model_parameters"/>
      <map_variables variable_1="k1" variable_2="k1"/>
      <map_variables variable_1="km1" variable_2="km1"/>
      <map_variables variable_1="j61" variable_2="j61"/>
      <map_variables variable_1="j11" variable_2="j11"/>
      <map_variables variable_1="k16" variable_2="k16"/>
      <map_variables variable_1="k61" variable_2="k61"/>
      <map_variables variable_1="phi_pRB" variable_2="phi_pRB"/>
   </connection>
   <connection xmlns="http://www.cellml.org/cellml/1.0#">
      <map_components component_1="E2F1" component_2="model_parameters"/>
      <map_variables variable_1="kp" variable_2="kp"/>
      <map_variables variable_1="k2" variable_2="k2"/>
      <map_variables variable_1="a" variable_2="a"/>
      <map_variables variable_1="km2" variable_2="km2"/>
      <map_variables variable_1="j12" variable_2="j12"/>
      <map_variables variable_1="j62" variable_2="j62"/>
      <map_variables variable_1="phi_E2F1" variable_2="phi_E2F1"/>
   </connection>
   <connection xmlns="http://www.cellml.org/cellml/1.0#">
      <map_components component_1="CycDi" component_2="model_parameters"/>
      <map_variables variable_1="k3" variable_2="k3"/>
      <map_variables variable_1="k23" variable_2="k23"/>
      <map_variables variable_1="j13" variable_2="j13"/>
      <map_variables variable_1="j63" variable_2="j63"/>
      <map_variables variable_1="k43" variable_2="k43"/>
      <map_variables variable_1="k34" variable_2="k34"/>
      <map_variables variable_1="km4" variable_2="km4"/>
      <map_variables variable_1="phi_CycDi" variable_2="phi_CycDi"/>
   </connection>
   <connection xmlns="http://www.cellml.org/cellml/1.0#">
      <map_components component_1="CycDa" component_2="model_parameters"/>
      <map_variables variable_1="k34" variable_2="k34"/>
      <map_variables variable_1="km4" variable_2="km4"/>
      <map_variables variable_1="k43" variable_2="k43"/>
      <map_variables variable_1="phi_CycDa" variable_2="phi_CycDa"/>
   </connection>
   <connection xmlns="http://www.cellml.org/cellml/1.0#">
      <map_components component_1="AP1" component_2="model_parameters"/>
      <map_variables variable_1="Fm" variable_2="Fm"/>
      <map_variables variable_1="k25" variable_2="k25"/>
      <map_variables variable_1="j15" variable_2="j15"/>
      <map_variables variable_1="j65" variable_2="j65"/>
      <map_variables variable_1="phi_AP1" variable_2="phi_AP1"/>
   </connection>
   <connection xmlns="http://www.cellml.org/cellml/1.0#">
      <map_components component_1="pRBp" component_2="model_parameters"/>
      <map_variables variable_1="k16" variable_2="k16"/>
      <map_variables variable_1="k61" variable_2="k61"/>
      <map_variables variable_1="k67" variable_2="k67"/>
      <map_variables variable_1="k76" variable_2="k76"/>
      <map_variables variable_1="phi_pRBp" variable_2="phi_pRBp"/>
   </connection>
   <connection xmlns="http://www.cellml.org/cellml/1.0#">
      <map_components component_1="pRBpp" component_2="model_parameters"/>
      <map_variables variable_1="k67" variable_2="k67"/>
      <map_variables variable_1="k76" variable_2="k76"/>
      <map_variables variable_1="phi_pRBpp" variable_2="phi_pRBpp"/>
   </connection>
   <connection xmlns="http://www.cellml.org/cellml/1.0#">
      <map_components component_1="CycEi" component_2="model_parameters"/>
      <map_variables variable_1="k28" variable_2="k28"/>
      <map_variables variable_1="k98" variable_2="k98"/>
      <map_variables variable_1="k89" variable_2="k89"/>
      <map_variables variable_1="km9" variable_2="km9"/>
      <map_variables variable_1="j18" variable_2="j18"/>
      <map_variables variable_1="j68" variable_2="j68"/>
      <map_variables variable_1="phi_CycEi" variable_2="phi_CycEi"/>
   </connection>
   <connection xmlns="http://www.cellml.org/cellml/1.0#">
      <map_components component_1="CycEa" component_2="model_parameters"/>
      <map_variables variable_1="k98" variable_2="k98"/>
      <map_variables variable_1="k89" variable_2="k89"/>
      <map_variables variable_1="km9" variable_2="km9"/>
      <map_variables variable_1="phi_CycEa" variable_2="phi_CycEa"/>
   </connection>
   <connection xmlns="http://www.cellml.org/cellml/1.0#">
      <map_components component_1="pRB" component_2="E2F1"/>
      <map_variables variable_1="E2F1" variable_2="E2F1"/>
      <map_variables variable_1="pRB" variable_2="pRB"/>
   </connection>
   <connection xmlns="http://www.cellml.org/cellml/1.0#">
      <map_components component_1="pRB" component_2="CycDa"/>
      <map_variables variable_1="CycDa" variable_2="CycDa"/>
   </connection>
   <connection xmlns="http://www.cellml.org/cellml/1.0#">
      <map_components component_1="pRB" component_2="pRBp"/>
      <map_variables variable_1="pRBp" variable_2="pRBp"/>
      <map_variables variable_1="pRB" variable_2="pRB"/>
   </connection>
   <connection xmlns="http://www.cellml.org/cellml/1.0#">
      <map_components component_1="E2F1" component_2="pRBp"/>
      <map_variables variable_1="pRBp" variable_2="pRBp"/>
   </connection>
   <connection xmlns="http://www.cellml.org/cellml/1.0#">
      <map_components component_1="CycDi" component_2="AP1"/>
      <map_variables variable_1="AP1" variable_2="AP1"/>
   </connection>
   <connection xmlns="http://www.cellml.org/cellml/1.0#">
      <map_components component_1="CycDi" component_2="E2F1"/>
      <map_variables variable_1="E2F1" variable_2="E2F1"/>
   </connection>
   <connection xmlns="http://www.cellml.org/cellml/1.0#">
      <map_components component_1="CycDi" component_2="pRB"/>
      <map_variables variable_1="pRB" variable_2="pRB"/>
   </connection>
   <connection xmlns="http://www.cellml.org/cellml/1.0#">
      <map_components component_1="CycDi" component_2="pRBp"/>
      <map_variables variable_1="pRBp" variable_2="pRBp"/>
   </connection>
   <connection xmlns="http://www.cellml.org/cellml/1.0#">
      <map_components component_1="CycDi" component_2="CycDa"/>
      <map_variables variable_1="CycDi" variable_2="CycDi"/>
      <map_variables variable_1="CycDa" variable_2="CycDa"/>
   </connection>
   <connection xmlns="http://www.cellml.org/cellml/1.0#">
      <map_components component_1="AP1" component_2="pRB"/>
      <map_variables variable_1="pRB" variable_2="pRB"/>
   </connection>
   <connection xmlns="http://www.cellml.org/cellml/1.0#">
      <map_components component_1="AP1" component_2="pRBp"/>
      <map_variables variable_1="pRBp" variable_2="pRBp"/>
   </connection>
   <connection xmlns="http://www.cellml.org/cellml/1.0#">
      <map_components component_1="AP1" component_2="E2F1"/>
      <map_variables variable_1="E2F1" variable_2="E2F1"/>
   </connection>
   <connection xmlns="http://www.cellml.org/cellml/1.0#">
      <map_components component_1="pRBp" component_2="CycDa"/>
      <map_variables variable_1="CycDa" variable_2="CycDa"/>
   </connection>
   <connection xmlns="http://www.cellml.org/cellml/1.0#">
      <map_components component_1="pRBp" component_2="CycEa"/>
      <map_variables variable_1="CycEa" variable_2="CycEa"/>
   </connection>
   <connection xmlns="http://www.cellml.org/cellml/1.0#">
      <map_components component_1="pRBp" component_2="pRBpp"/>
      <map_variables variable_1="pRBpp" variable_2="pRBpp"/>
      <map_variables variable_1="pRBp" variable_2="pRBp"/>
   </connection>
   <connection xmlns="http://www.cellml.org/cellml/1.0#">
      <map_components component_1="pRBpp" component_2="CycEa"/>
      <map_variables variable_1="CycEa" variable_2="CycEa"/>
   </connection>
   <connection xmlns="http://www.cellml.org/cellml/1.0#">
      <map_components component_1="CycEi" component_2="E2F1"/>
      <map_variables variable_1="E2F1" variable_2="E2F1"/>
   </connection>
   <connection xmlns="http://www.cellml.org/cellml/1.0#">
      <map_components component_1="CycEi" component_2="pRB"/>
      <map_variables variable_1="pRB" variable_2="pRB"/>
   </connection>
   <connection xmlns="http://www.cellml.org/cellml/1.0#">
      <map_components component_1="CycEi" component_2="pRBp"/>
      <map_variables variable_1="pRBp" variable_2="pRBp"/>
   </connection>
   <connection xmlns="http://www.cellml.org/cellml/1.0#">
      <map_components component_1="CycEi" component_2="CycEa"/>
      <map_variables variable_1="CycEa" variable_2="CycEa"/>
      <map_variables variable_1="CycEi" variable_2="CycEi"/>
   </connection>
</model>