Metabolic Component Library(MCL)
We present the Metabolic Component Library (MCL), an open-source library for the modelling of metabolic components and metabolic networks in CellML. | |
Key features are
| |
MCL was developed by Matthias König at the Charité Berlin with support from Randall Britten from the Auckland Bioengineering Institute and Maxwell Neal from the University of Washington. |
|
Annotation of the metabolic components to biological ontologies was performed with SemGen developed by Dr. Maxwell Neal at the University of Washington. |
|
The project was funded by the Virtual Liver Network (VLN). | |
Please try and report any questions or problems to
matthias.koenig[AT]charite.de Thanks and have fun The MCL team. |
Components
Substrate(s) : S (S1, S2, ...)Product(s) : P (P1, P2, ... )
Inhibitor(s) : I (I1, I2, ...)
Activator(s) : A (A1, A2, ...)
Modifier(s) : M (M1, M2, ...)
#* Render the HTML overview dynamically based on the defined components. Changes in the underlying definitions of the components will be directly reflected in the documentation. *# #foreach( $c in $cSet )
$c.getName()
#foreach ( $var in $c.getVariablesFromKineticsComponent() )
$var #end Validation Errors: $c.getNValidationErrors() |
CellML #foreach( $m in $c.getSBGNSet()) $m #end |