Location: Testing RDF linking across CellML, SED-ML, and SVG @ a17eb9e048eb / doc.html

Author:
David Nickerson <nickerso@users.sourceforge.net>
Date:
2016-11-29 17:16:20+13:00
Desc:
adding COMBINE archive manifest and metadata created using http://webcat.sems.uni-rostock.de/cat/
Permanent Source URI:
http://models.cellml.org/workspace/43c/rawfile/a17eb9e048ebd2a04978f679baa4c41a2fd6ff0a/doc.html

Here we are testing some ideas about using COMBINE Archive Manifest files to define the relevant resources in a workspace and then adding annotations to describe the linkage between entities in the SVG image and the CellML models and SED-ML experiments. We will begin with the RDF annotations being in this workspace (and listed in the manifest), but in the general case tools would query PMR for any relevant annotations.

The SED-ML description of the main simulation experiment is available; as is the main CellML model defining this particular stimulus protocol and the base mathematical model.


Schematic drawing of the basic model structure, simplified for the purposes of this testing.