Generated Code
The following is c_ida code generated by the CellML API from this CellML file. (Back to language selection)
The raw code is available.
/* There are a total of 13 entries in the algebraic variable array. There are a total of 4 entries in each of the rate and state variable arrays. There are a total of 14 entries in the constant variable array. */ /* * CONSTANTS[0] is stimPeriod in component stimulus_protocol_params (ms). * CONSTANTS[1] is stimDuration in component stimulus_protocol_params (ms). * CONSTANTS[2] is stimCurrent in component stimulus_protocol_params (uA_per_cmsq). * VOI is time in component time (ms). * ALGEBRAIC[11] is INa in component INa (uA_per_cmsq). * ALGEBRAIC[12] is IK in component IK (uA_per_cmsq). * ALGEBRAIC[4] is Ileak in component Ileak (uA_per_cmsq). * STATES[0] is V in component action_potential (mV). * ALGEBRAIC[0] is minus_V in component action_potential (mV). * STATES[1] is X in component hh_gating_variable (dimensionless). * STATES[2] is X in component hh_gating_variable (dimensionless). * STATES[3] is X in component hh_gating_variable (dimensionless). * CONSTANTS[3] is V_initial in component initial_conditions (mV). * CONSTANTS[4] is n_initial in component initial_conditions (dimensionless). * CONSTANTS[5] is m_initial in component initial_conditions (dimensionless). * CONSTANTS[6] is h_initial in component initial_conditions (dimensionless). * ALGEBRAIC[1] is IStim in component stimulus_protocol (uA_per_cmsq). * CONSTANTS[7] is VNa in component parameters (mV). * CONSTANTS[8] is VK in component parameters (mV). * CONSTANTS[9] is Vleak in component parameters (mV). * CONSTANTS[10] is gNa_max in component parameters (mS_per_cmsq). * CONSTANTS[11] is gK_max in component parameters (mS_per_cmsq). * CONSTANTS[12] is gleak_max in component parameters (mS_per_cmsq). * CONSTANTS[13] is Cm in component parameters (uF_per_cmsq). * ALGEBRAIC[2] is gNa in component INa (mS_per_cmsq). * ALGEBRAIC[3] is gK in component IK (mS_per_cmsq). * ALGEBRAIC[5] is alpha in component alpha_m (per_ms). * ALGEBRAIC[6] is beta in component beta_m (per_ms). * ALGEBRAIC[7] is alpha in component alpha_h (per_ms). * ALGEBRAIC[8] is beta in component beta_h (per_ms). * ALGEBRAIC[9] is alpha in component alpha_n (per_ms). * ALGEBRAIC[10] is beta in component beta_n (per_ms). * RATES[0] is d/dt V in component action_potential (mV). * RATES[2] is d/dt X in component hh_gating_variable (dimensionless). * RATES[1] is d/dt X in component hh_gating_variable (dimensionless). * RATES[3] is d/dt X in component hh_gating_variable (dimensionless). * There are a total of 1 condition variables. */ void initConsts(double* CONSTANTS, double* RATES, double *STATES) { CONSTANTS[0] = 50; CONSTANTS[1] = 0.5; CONSTANTS[2] = -10.0; CONSTANTS[3] = 0.0; CONSTANTS[4] = 0.315; CONSTANTS[5] = 0.042; CONSTANTS[6] = 0.608; CONSTANTS[7] = -115.0; CONSTANTS[8] = 12.0; CONSTANTS[9] = -10.613; CONSTANTS[10] = 120.0; CONSTANTS[11] = 36.0; CONSTANTS[12] = 0.3; CONSTANTS[13] = 1.0; STATES[0] = CONSTANTS[3]; STATES[1] = CONSTANTS[6]; STATES[2] = CONSTANTS[5]; STATES[3] = CONSTANTS[4]; RATES[0] = 0.1001; RATES[2] = 0.1001; RATES[1] = 0.1001; RATES[3] = 0.1001; } void computeResiduals(double VOI, double* CONSTANTS, double* RATES, double* OLDRATES, double* STATES, double* OLDSTATES, double* ALGEBRAIC, double* CONDVARS) { resid[0] = RATES[0] - (ALGEBRAIC[1] - (ALGEBRAIC[11]+ALGEBRAIC[12]+ALGEBRAIC[4]))/CONSTANTS[13]; resid[1] = RATES[2] - ALGEBRAIC[5]*(1.00000 - STATES[2]) - ALGEBRAIC[6]*STATES[2]; resid[2] = RATES[1] - ALGEBRAIC[7]*(1.00000 - STATES[1]) - ALGEBRAIC[8]*STATES[1]; resid[3] = RATES[3] - ALGEBRAIC[9]*(1.00000 - STATES[3]) - ALGEBRAIC[10]*STATES[3]; } void computeVariables(double VOI, double* CONSTANTS, double* RATES, double* STATES, double* ALGEBRAIC) { ALGEBRAIC[0] = - STATES[0]; } void computeEssentialVariables(double VOI, double* CONSTANTS, double* RATES, double* STATES, double* ALGEBRAIC) { ALGEBRAIC[1] = (CONDVAR[0]<0.00000 ? CONSTANTS[2] : 0.00000); ALGEBRAIC[4] = CONSTANTS[12]*(STATES[0] - CONSTANTS[9]); ALGEBRAIC[5] = ( 0.100000*(STATES[0]+25.0000))/(exp((STATES[0]+25.0000)/10.0000) - 1.00000); ALGEBRAIC[6] = 4.00000*exp(STATES[0]/18.0000); ALGEBRAIC[7] = 0.0700000*exp(STATES[0]/20.0000); ALGEBRAIC[8] = 1.00000/(exp((STATES[0]+30.0000)/10.0000)+1.00000); ALGEBRAIC[9] = ( 0.0100000*(STATES[0]+10.0000))/(exp((STATES[0]+10.0000)/10.0000) - 1.00000); ALGEBRAIC[10] = 0.125000*exp(STATES[0]/80.0000); ALGEBRAIC[2] = CONSTANTS[10]*pow(STATES[2], 3.00000)*STATES[1]; ALGEBRAIC[11] = ALGEBRAIC[2]*(STATES[0] - CONSTANTS[7]); ALGEBRAIC[3] = CONSTANTS[11]*pow(STATES[3], 4.00000); ALGEBRAIC[12] = ALGEBRAIC[3]*(STATES[0] - CONSTANTS[8]); } void getStateInformation(double* SI) { SI[0] = 1.0; SI[1] = 1.0; SI[2] = 1.0; SI[3] = 1.0; } void computeRoots(double VOI, double* CONSTANTS, double* RATES, double* OLDRATES, double* STATES, double* OLDSTATES, double* ALGEBRAIC, double* CONDVARS) { CONDVAR[0] = (int)(VOI) % (int)(CONSTANTS[0]) - CONSTANTS[1]; }