function [VOI, STATES, ALGEBRAIC, CONSTANTS] = mainFunction() % This is the "main function". In Matlab, things work best if you rename this function to match the filename. [VOI, STATES, ALGEBRAIC, CONSTANTS] = solveModel(); end function [algebraicVariableCount] = getAlgebraicVariableCount() % Used later when setting a global variable with the number of algebraic variables. % Note: This is not the "main method". algebraicVariableCount =84; end % There are a total of 39 entries in each of the rate and state variable arrays. % There are a total of 145 entries in the constant variable array. % function [VOI, STATES, ALGEBRAIC, CONSTANTS] = solveModel() % Create ALGEBRAIC of correct size global algebraicVariableCount; algebraicVariableCount = getAlgebraicVariableCount(); % Initialise constants and state variables [INIT_STATES, CONSTANTS] = initConsts; % Set timespan to solve over tspan = [0, 10]; % Set numerical accuracy options for ODE solver options = odeset('RelTol', 1e-06, 'AbsTol', 1e-06, 'MaxStep', 1); % Solve model with ODE solver [VOI, STATES] = ode15s(@(VOI, STATES)computeRates(VOI, STATES, CONSTANTS), tspan, INIT_STATES, options); % Compute algebraic variables [RATES, ALGEBRAIC] = computeRates(VOI, STATES, CONSTANTS); ALGEBRAIC = computeAlgebraic(ALGEBRAIC, CONSTANTS, STATES, VOI); % Plot state variables against variable of integration [LEGEND_STATES, LEGEND_ALGEBRAIC, LEGEND_VOI, LEGEND_CONSTANTS] = createLegends(); figure(); plot(VOI, STATES); xlabel(LEGEND_VOI); l = legend(LEGEND_STATES); set(l,'Interpreter','none'); end function [LEGEND_STATES, LEGEND_ALGEBRAIC, LEGEND_VOI, LEGEND_CONSTANTS] = createLegends() LEGEND_STATES = ''; LEGEND_ALGEBRAIC = ''; LEGEND_VOI = ''; LEGEND_CONSTANTS = ''; LEGEND_CONSTANTS(:,1) = strpad('t_period in component Istim_parameters (ms)'); LEGEND_CONSTANTS(:,2) = strpad('V_ICCrest in component Istim_parameters (mV)'); LEGEND_CONSTANTS(:,3) = strpad('V_ICCamp in component Istim_parameters (mV)'); LEGEND_CONSTANTS(:,4) = strpad('t_ICCpeak in component Istim_parameters (ms)'); LEGEND_CONSTANTS(:,5) = strpad('t_slope in component Istim_parameters (ms)'); LEGEND_CONSTANTS(:,6) = strpad('f_1 in component Istim_parameters (ms)'); LEGEND_CONSTANTS(:,7) = strpad('f_2 in component Istim_parameters (ms)'); LEGEND_CONSTANTS(:,8) = strpad('Gcouple in component Istim_parameters (nS)'); LEGEND_CONSTANTS(:,9) = strpad('T in component Istim_parameters (kelvin)'); LEGEND_VOI = strpad('time in component time (ms)'); LEGEND_ALGEBRAIC(:,14) = strpad('I_stim in component Periodic_IStim_protocol (pA)'); LEGEND_ALGEBRAIC(:,9) = strpad('V_ICC in component Periodic_IStim_protocol (mV)'); LEGEND_STATES(:,1) = strpad('V in component Membrane_potential (mV)'); LEGEND_ALGEBRAIC(:,83) = strpad('I_ion in component Membrane_potential (pA)'); LEGEND_ALGEBRAIC(:,38) = strpad('I in component Ionic_currents (pA)'); LEGEND_ALGEBRAIC(:,46) = strpad('I in component Ionic_currents (pA)'); LEGEND_ALGEBRAIC(:,55) = strpad('I in component Ionic_currents (pA)'); LEGEND_ALGEBRAIC(:,62) = strpad('I in component Ionic_currents (pA)'); LEGEND_ALGEBRAIC(:,68) = strpad('I in component Ionic_currents (pA)'); LEGEND_ALGEBRAIC(:,26) = strpad('I_NCX in component INCX (pA)'); LEGEND_ALGEBRAIC(:,30) = strpad('I_NaK in component INaK (pA)'); LEGEND_ALGEBRAIC(:,74) = strpad('I in component Ionic_currents (pA)'); LEGEND_ALGEBRAIC(:,80) = strpad('I in component Ionic_currents (pA)'); LEGEND_STATES(:,2) = strpad('Cai in component Cai (mM)'); LEGEND_STATES(:,3) = strpad('Nai in component Nai (mM)'); LEGEND_STATES(:,4) = strpad('Ki in component Ki (mM)'); LEGEND_STATES(:,5) = strpad('O_CaL in component ICaL_channel_states (dimensionless)'); LEGEND_ALGEBRAIC(:,18) = strpad('P_CaT in component ICaT (dimensionless)'); LEGEND_STATES(:,6) = strpad('O4 in component IBK_channel_states (dimensionless)'); LEGEND_ALGEBRAIC(:,22) = strpad('P_Kv in component IKv (dimensionless)'); LEGEND_STATES(:,7) = strpad('O_Na in component INa_channel_states (dimensionless)'); LEGEND_ALGEBRAIC(:,84) = strpad('norm in component ICaL_channel_states (dimensionless)'); LEGEND_ALGEBRAIC(:,82) = strpad('norm in component IBK_channel_states (dimensionless)'); LEGEND_ALGEBRAIC(:,57) = strpad('norm in component INa_channel_states (dimensionless)'); LEGEND_STATES(:,8) = strpad('X in component gating_kinetics (dimensionless)'); LEGEND_STATES(:,9) = strpad('X in component gating_kinetics (dimensionless)'); LEGEND_STATES(:,10) = strpad('X in component gating_kinetics (dimensionless)'); LEGEND_STATES(:,11) = strpad('X in component gating_kinetics (dimensionless)'); LEGEND_CONSTANTS(:,10) = strpad('V_init in component initial_conditions (mV)'); LEGEND_CONSTANTS(:,11) = strpad('Cm in component model_parameters (pF)'); LEGEND_CONSTANTS(:,12) = strpad('g_CaL in component model_parameters (nS)'); LEGEND_CONSTANTS(:,13) = strpad('R in component model_parameters (J_per_K_mol)'); LEGEND_CONSTANTS(:,14) = strpad('F in component model_parameters (C_per_mmol)'); LEGEND_CONSTANTS(:,15) = strpad('T0CaL in component model_parameters (kelvin)'); LEGEND_CONSTANTS(:,16) = strpad('T0CaT in component model_parameters (kelvin)'); LEGEND_CONSTANTS(:,17) = strpad('Q10Ca in component model_parameters (dimensionless)'); LEGEND_CONSTANTS(:,18) = strpad('Cao in component model_parameters (mM)'); LEGEND_CONSTANTS(:,19) = strpad('C0_init in component initial_conditions (dimensionless)'); LEGEND_CONSTANTS(:,20) = strpad('C1_init in component initial_conditions (dimensionless)'); LEGEND_CONSTANTS(:,21) = strpad('C2_init in component initial_conditions (dimensionless)'); LEGEND_CONSTANTS(:,22) = strpad('C3_init in component initial_conditions (dimensionless)'); LEGEND_CONSTANTS(:,23) = strpad('C0Ca_init in component initial_conditions (dimensionless)'); LEGEND_CONSTANTS(:,24) = strpad('C1Ca_init in component initial_conditions (dimensionless)'); LEGEND_CONSTANTS(:,25) = strpad('C2Ca_init in component initial_conditions (dimensionless)'); LEGEND_CONSTANTS(:,26) = strpad('C3Ca_init in component initial_conditions (dimensionless)'); LEGEND_CONSTANTS(:,27) = strpad('ICa_init in component initial_conditions (dimensionless)'); LEGEND_CONSTANTS(:,28) = strpad('IVs_init in component initial_conditions (dimensionless)'); LEGEND_CONSTANTS(:,29) = strpad('IVf_init in component initial_conditions (dimensionless)'); LEGEND_CONSTANTS(:,30) = strpad('IVfCa_init in component initial_conditions (dimensionless)'); LEGEND_CONSTANTS(:,31) = strpad('IVsCa_init in component initial_conditions (dimensionless)'); LEGEND_CONSTANTS(:,32) = strpad('O_CaL_init in component initial_conditions (dimensionless)'); LEGEND_CONSTANTS(:,33) = strpad('g_CaT in component model_parameters (nS)'); LEGEND_CONSTANTS(:,34) = strpad('d_CaT_init in component initial_conditions (dimensionless)'); LEGEND_CONSTANTS(:,35) = strpad('f_CaT_init in component initial_conditions (dimensionless)'); LEGEND_CONSTANTS(:,36) = strpad('tau_dCaT in component model_parameters (ms)'); LEGEND_CONSTANTS(:,37) = strpad('g_Kv in component model_parameters (nS)'); LEGEND_CONSTANTS(:,38) = strpad('T0K in component model_parameters (kelvin)'); LEGEND_CONSTANTS(:,39) = strpad('Q10K in component model_parameters (dimensionless)'); LEGEND_CONSTANTS(:,40) = strpad('Ko in component model_parameters (mM)'); LEGEND_CONSTANTS(:,41) = strpad('x_Kv_init in component initial_conditions (dimensionless)'); LEGEND_CONSTANTS(:,42) = strpad('y_Kv_init in component initial_conditions (dimensionless)'); LEGEND_CONSTANTS(:,43) = strpad('tau_xKv in component model_parameters (ms)'); LEGEND_CONSTANTS(:,44) = strpad('tau_yKv in component model_parameters (ms)'); LEGEND_CONSTANTS(:,45) = strpad('g_BK in component model_parameters (nS)'); LEGEND_CONSTANTS(:,46) = strpad('BK_C0_init in component initial_conditions (dimensionless)'); LEGEND_CONSTANTS(:,47) = strpad('BK_C1_init in component initial_conditions (dimensionless)'); LEGEND_CONSTANTS(:,48) = strpad('BK_C2_init in component initial_conditions (dimensionless)'); LEGEND_CONSTANTS(:,49) = strpad('BK_C3_init in component initial_conditions (dimensionless)'); LEGEND_CONSTANTS(:,50) = strpad('BK_C4_init in component initial_conditions (dimensionless)'); LEGEND_CONSTANTS(:,51) = strpad('O0_init in component initial_conditions (dimensionless)'); LEGEND_CONSTANTS(:,52) = strpad('O1_init in component initial_conditions (dimensionless)'); LEGEND_CONSTANTS(:,53) = strpad('O2_init in component initial_conditions (dimensionless)'); LEGEND_CONSTANTS(:,54) = strpad('O3_init in component initial_conditions (dimensionless)'); LEGEND_CONSTANTS(:,55) = strpad('O4_init in component initial_conditions (dimensionless)'); LEGEND_CONSTANTS(:,56) = strpad('k_on in component model_parameters (per_ms)'); LEGEND_CONSTANTS(:,57) = strpad('k_off_C in component model_parameters (per_ms)'); LEGEND_CONSTANTS(:,58) = strpad('k_off_O in component model_parameters (per_ms)'); LEGEND_CONSTANTS(:,59) = strpad('g_Na in component model_parameters (nS)'); LEGEND_CONSTANTS(:,60) = strpad('T0Na in component model_parameters (kelvin)'); LEGEND_CONSTANTS(:,61) = strpad('Q10Na in component model_parameters (dimensionless)'); LEGEND_CONSTANTS(:,62) = strpad('Nao in component model_parameters (mM)'); LEGEND_CONSTANTS(:,63) = strpad('Na_C1_init in component initial_conditions (dimensionless)'); LEGEND_CONSTANTS(:,64) = strpad('Na_C2_init in component initial_conditions (dimensionless)'); LEGEND_CONSTANTS(:,65) = strpad('Na_C3_init in component initial_conditions (dimensionless)'); LEGEND_CONSTANTS(:,66) = strpad('I1_init in component initial_conditions (dimensionless)'); LEGEND_CONSTANTS(:,67) = strpad('I2_init in component initial_conditions (dimensionless)'); LEGEND_CONSTANTS(:,68) = strpad('O_Na_init in component initial_conditions (dimensionless)'); LEGEND_CONSTANTS(:,69) = strpad('K_mCa in component model_parameters (mM)'); LEGEND_CONSTANTS(:,70) = strpad('K_mNai in component model_parameters (mM)'); LEGEND_CONSTANTS(:,71) = strpad('k_sat in component model_parameters (dimensionless)'); LEGEND_CONSTANTS(:,72) = strpad('gamma in component model_parameters (dimensionless)'); LEGEND_CONSTANTS(:,73) = strpad('P_NCX in component model_parameters (pA)'); LEGEND_CONSTANTS(:,74) = strpad('K_mK in component model_parameters (mM)'); LEGEND_CONSTANTS(:,75) = strpad('K_mNa in component model_parameters (mM)'); LEGEND_CONSTANTS(:,76) = strpad('P_NaK in component model_parameters (pA)'); LEGEND_CONSTANTS(:,77) = strpad('g_NsNa in component model_parameters (nS)'); LEGEND_CONSTANTS(:,78) = strpad('g_NsK in component model_parameters (nS)'); LEGEND_CONSTANTS(:,79) = strpad('n_CRT in component model_parameters (dimensionless)'); LEGEND_CONSTANTS(:,80) = strpad('n_CaM in component model_parameters (dimensionless)'); LEGEND_CONSTANTS(:,81) = strpad('CRT_total in component model_parameters (mM)'); LEGEND_CONSTANTS(:,82) = strpad('CaM_total in component model_parameters (mM)'); LEGEND_CONSTANTS(:,83) = strpad('K_D_CRT in component model_parameters (mM)'); LEGEND_CONSTANTS(:,84) = strpad('K_D_CaM in component model_parameters (mM4)'); LEGEND_CONSTANTS(:,85) = strpad('V_cell in component model_parameters (litre)'); LEGEND_CONSTANTS(:,86) = strpad('Cai_total_init in component initial_conditions (mM)'); LEGEND_CONSTANTS(:,87) = strpad('Cai_init in component initial_conditions (mM)'); LEGEND_CONSTANTS(:,88) = strpad('Nai_init in component initial_conditions (mM)'); LEGEND_CONSTANTS(:,89) = strpad('Ki_init in component initial_conditions (mM)'); LEGEND_ALGEBRAIC(:,1) = strpad('t in component Periodic_IStim_protocol (ms)'); LEGEND_CONSTANTS(:,90) = strpad('T in component model_parameters (kelvin)'); LEGEND_CONSTANTS(:,91) = strpad('PO in component INS_Na (dimensionless)'); LEGEND_CONSTANTS(:,92) = strpad('PO in component INS_K (dimensionless)'); LEGEND_STATES(:,12) = strpad('Cai_total in component Cai (mM)'); LEGEND_ALGEBRAIC(:,53) = strpad('Cai_total_rate in component Cai (mM_per_ms)'); LEGEND_CONSTANTS(:,93) = strpad('Cvt in component Cai (fM_per_s2mM_per_ms)'); LEGEND_CONSTANTS(:,94) = strpad('Cvt in component Nai (fM_per_s2mM_per_ms)'); LEGEND_CONSTANTS(:,95) = strpad('Cvt in component Ki (fM_per_s2mM_per_ms)'); LEGEND_ALGEBRAIC(:,34) = strpad('E in component Nernst_potential (mV)'); LEGEND_STATES(:,13) = strpad('C0 in component ICaL_channel_states (dimensionless)'); LEGEND_STATES(:,14) = strpad('C1 in component ICaL_channel_states (dimensionless)'); LEGEND_STATES(:,15) = strpad('C2 in component ICaL_channel_states (dimensionless)'); LEGEND_STATES(:,16) = strpad('C3 in component ICaL_channel_states (dimensionless)'); LEGEND_STATES(:,17) = strpad('C0Ca in component ICaL_channel_states (dimensionless)'); LEGEND_STATES(:,18) = strpad('C1Ca in component ICaL_channel_states (dimensionless)'); LEGEND_STATES(:,19) = strpad('C2Ca in component ICaL_channel_states (dimensionless)'); LEGEND_STATES(:,20) = strpad('C3Ca in component ICaL_channel_states (dimensionless)'); LEGEND_STATES(:,21) = strpad('ICa in component ICaL_channel_states (dimensionless)'); LEGEND_STATES(:,22) = strpad('IVs in component ICaL_channel_states (dimensionless)'); LEGEND_STATES(:,23) = strpad('IVf in component ICaL_channel_states (dimensionless)'); LEGEND_STATES(:,24) = strpad('IVfCa in component ICaL_channel_states (dimensionless)'); LEGEND_STATES(:,25) = strpad('IVsCa in component ICaL_channel_states (dimensionless)'); LEGEND_ALGEBRAIC(:,2) = strpad('alpha in component ICaL_channel_states (per_ms)'); LEGEND_ALGEBRAIC(:,10) = strpad('beta in component ICaL_channel_states (per_ms)'); LEGEND_ALGEBRAIC(:,15) = strpad('alpha_0 in component ICaL_channel_states (per_ms)'); LEGEND_ALGEBRAIC(:,19) = strpad('alpha_1 in component ICaL_channel_states (per_ms)'); LEGEND_ALGEBRAIC(:,23) = strpad('alpha_2 in component ICaL_channel_states (per_ms)'); LEGEND_ALGEBRAIC(:,27) = strpad('alpha_3 in component ICaL_channel_states (per_ms)'); LEGEND_ALGEBRAIC(:,32) = strpad('beta_0 in component ICaL_channel_states (per_ms)'); LEGEND_ALGEBRAIC(:,37) = strpad('beta_1 in component ICaL_channel_states (per_ms)'); LEGEND_ALGEBRAIC(:,41) = strpad('beta_2 in component ICaL_channel_states (per_ms)'); LEGEND_ALGEBRAIC(:,45) = strpad('beta_3 in component ICaL_channel_states (per_ms)'); LEGEND_CONSTANTS(:,145) = strpad('delta in component ICaL_channel_states (per_ms)'); LEGEND_ALGEBRAIC(:,81) = strpad('theta in component ICaL_channel_states (per_ms)'); LEGEND_ALGEBRAIC(:,54) = strpad('phi_s in component ICaL_channel_states (per_ms)'); LEGEND_ALGEBRAIC(:,49) = strpad('phi_f in component ICaL_channel_states (per_ms)'); LEGEND_ALGEBRAIC(:,72) = strpad('omega_s in component ICaL_channel_states (per_ms)'); LEGEND_ALGEBRAIC(:,69) = strpad('omega_f in component ICaL_channel_states (per_ms)'); LEGEND_ALGEBRAIC(:,78) = strpad('omega_fs in component ICaL_channel_states (per_ms)'); LEGEND_ALGEBRAIC(:,75) = strpad('omega_sf in component ICaL_channel_states (per_ms)'); LEGEND_ALGEBRAIC(:,67) = strpad('psi_s in component ICaL_channel_states (per_ms)'); LEGEND_ALGEBRAIC(:,64) = strpad('psi_f in component ICaL_channel_states (per_ms)'); LEGEND_ALGEBRAIC(:,61) = strpad('xi_s in component ICaL_channel_states (per_ms)'); LEGEND_ALGEBRAIC(:,58) = strpad('xi_f in component ICaL_channel_states (per_ms)'); LEGEND_CONSTANTS(:,131) = strpad('phi in component temperature_factor (dimensionless)'); LEGEND_ALGEBRAIC(:,42) = strpad('E in component Nernst_potential (mV)'); LEGEND_ALGEBRAIC(:,3) = strpad('X_inf in component d_inf (dimensionless)'); LEGEND_CONSTANTS(:,132) = strpad('phi in component temperature_factor (dimensionless)'); LEGEND_ALGEBRAIC(:,4) = strpad('X_inf in component f_inf (dimensionless)'); LEGEND_ALGEBRAIC(:,11) = strpad('tau in component tau_f (ms)'); LEGEND_CONSTANTS(:,133) = strpad('phi in component temperature_factor (dimensionless)'); LEGEND_ALGEBRAIC(:,50) = strpad('E in component Nernst_potential (mV)'); LEGEND_ALGEBRAIC(:,5) = strpad('X_inf in component x_inf (dimensionless)'); LEGEND_CONSTANTS(:,134) = strpad('phi in component temperature_factor (dimensionless)'); LEGEND_ALGEBRAIC(:,6) = strpad('X_inf in component y_inf (dimensionless)'); LEGEND_CONSTANTS(:,135) = strpad('phi in component temperature_factor (dimensionless)'); LEGEND_ALGEBRAIC(:,59) = strpad('E in component Nernst_potential (mV)'); LEGEND_STATES(:,26) = strpad('C0 in component IBK_channel_states (dimensionless)'); LEGEND_STATES(:,27) = strpad('C1 in component IBK_channel_states (dimensionless)'); LEGEND_STATES(:,28) = strpad('C2 in component IBK_channel_states (dimensionless)'); LEGEND_STATES(:,29) = strpad('C3 in component IBK_channel_states (dimensionless)'); LEGEND_STATES(:,30) = strpad('C4 in component IBK_channel_states (dimensionless)'); LEGEND_STATES(:,31) = strpad('O0 in component IBK_channel_states (dimensionless)'); LEGEND_STATES(:,32) = strpad('O1 in component IBK_channel_states (dimensionless)'); LEGEND_STATES(:,33) = strpad('O2 in component IBK_channel_states (dimensionless)'); LEGEND_STATES(:,34) = strpad('O3 in component IBK_channel_states (dimensionless)'); LEGEND_ALGEBRAIC(:,7) = strpad('alpha in component IBK_channel_states (per_ms)'); LEGEND_ALGEBRAIC(:,12) = strpad('beta in component IBK_channel_states (per_ms)'); LEGEND_ALGEBRAIC(:,16) = strpad('k_C0O0 in component IBK_channel_states (per_ms)'); LEGEND_ALGEBRAIC(:,20) = strpad('k_C1O1 in component IBK_channel_states (per_ms)'); LEGEND_ALGEBRAIC(:,24) = strpad('k_C2O2 in component IBK_channel_states (per_ms)'); LEGEND_ALGEBRAIC(:,28) = strpad('k_C3O3 in component IBK_channel_states (per_ms)'); LEGEND_ALGEBRAIC(:,33) = strpad('k_C4O4 in component IBK_channel_states (per_ms)'); LEGEND_ALGEBRAIC(:,35) = strpad('k_O0C0 in component IBK_channel_states (per_ms)'); LEGEND_ALGEBRAIC(:,39) = strpad('k_O1C1 in component IBK_channel_states (per_ms)'); LEGEND_ALGEBRAIC(:,43) = strpad('k_O2C2 in component IBK_channel_states (per_ms)'); LEGEND_ALGEBRAIC(:,47) = strpad('k_O3C3 in component IBK_channel_states (per_ms)'); LEGEND_ALGEBRAIC(:,51) = strpad('k_O4C4 in component IBK_channel_states (per_ms)'); LEGEND_ALGEBRAIC(:,56) = strpad('k_C0C1 in component IBK_channel_states (per_ms)'); LEGEND_ALGEBRAIC(:,60) = strpad('k_C1C2 in component IBK_channel_states (per_ms)'); LEGEND_ALGEBRAIC(:,63) = strpad('k_C2C3 in component IBK_channel_states (per_ms)'); LEGEND_ALGEBRAIC(:,66) = strpad('k_C3C4 in component IBK_channel_states (per_ms)'); LEGEND_CONSTANTS(:,136) = strpad('k_C4C3 in component IBK_channel_states (per_ms)'); LEGEND_CONSTANTS(:,137) = strpad('k_C3C2 in component IBK_channel_states (per_ms)'); LEGEND_CONSTANTS(:,138) = strpad('k_C2C1 in component IBK_channel_states (per_ms)'); LEGEND_CONSTANTS(:,139) = strpad('k_C1C0 in component IBK_channel_states (per_ms)'); LEGEND_ALGEBRAIC(:,70) = strpad('k_O0O1 in component IBK_channel_states (per_ms)'); LEGEND_ALGEBRAIC(:,73) = strpad('k_O1O2 in component IBK_channel_states (per_ms)'); LEGEND_ALGEBRAIC(:,76) = strpad('k_O2O3 in component IBK_channel_states (per_ms)'); LEGEND_ALGEBRAIC(:,79) = strpad('k_O3O4 in component IBK_channel_states (per_ms)'); LEGEND_CONSTANTS(:,140) = strpad('k_O4O3 in component IBK_channel_states (per_ms)'); LEGEND_CONSTANTS(:,141) = strpad('k_O3O2 in component IBK_channel_states (per_ms)'); LEGEND_CONSTANTS(:,142) = strpad('k_O2O1 in component IBK_channel_states (per_ms)'); LEGEND_CONSTANTS(:,143) = strpad('k_O1O0 in component IBK_channel_states (per_ms)'); LEGEND_ALGEBRAIC(:,65) = strpad('E in component Nernst_potential (mV)'); LEGEND_STATES(:,35) = strpad('C1 in component INa_channel_states (dimensionless)'); LEGEND_STATES(:,36) = strpad('C2 in component INa_channel_states (dimensionless)'); LEGEND_STATES(:,37) = strpad('C3 in component INa_channel_states (dimensionless)'); LEGEND_STATES(:,38) = strpad('I1 in component INa_channel_states (dimensionless)'); LEGEND_STATES(:,39) = strpad('I2 in component INa_channel_states (dimensionless)'); LEGEND_ALGEBRAIC(:,8) = strpad('k_I2I1 in component INa_channel_states (per_ms)'); LEGEND_ALGEBRAIC(:,13) = strpad('k_I1O in component INa_channel_states (per_ms)'); LEGEND_ALGEBRAIC(:,17) = strpad('k_OC1 in component INa_channel_states (per_ms)'); LEGEND_ALGEBRAIC(:,21) = strpad('k_C1C2 in component INa_channel_states (per_ms)'); LEGEND_ALGEBRAIC(:,25) = strpad('k_C2C3 in component INa_channel_states (per_ms)'); LEGEND_ALGEBRAIC(:,29) = strpad('k_C3C2 in component INa_channel_states (per_ms)'); LEGEND_ALGEBRAIC(:,31) = strpad('k_C2C1 in component INa_channel_states (per_ms)'); LEGEND_ALGEBRAIC(:,36) = strpad('k_C1O in component INa_channel_states (per_ms)'); LEGEND_ALGEBRAIC(:,40) = strpad('k_OI1 in component INa_channel_states (per_ms)'); LEGEND_ALGEBRAIC(:,44) = strpad('k_I1I2 in component INa_channel_states (per_ms)'); LEGEND_ALGEBRAIC(:,48) = strpad('k_I1C1 in component INa_channel_states (per_ms)'); LEGEND_ALGEBRAIC(:,52) = strpad('k_C1I1 in component INa_channel_states (per_ms)'); LEGEND_CONSTANTS(:,144) = strpad('phi in component temperature_factor (dimensionless)'); LEGEND_ALGEBRAIC(:,71) = strpad('E in component Nernst_potential (mV)'); LEGEND_ALGEBRAIC(:,77) = strpad('E in component Nernst_potential (mV)'); LEGEND_CONSTANTS(:,96) = strpad('R in component constants (J_per_K_mol)'); LEGEND_CONSTANTS(:,97) = strpad('F in component constants (C_per_mmol)'); LEGEND_CONSTANTS(:,98) = strpad('z_Ca in component constants (dimensionless)'); LEGEND_CONSTANTS(:,99) = strpad('z_Na in component constants (dimensionless)'); LEGEND_CONSTANTS(:,100) = strpad('z_K in component constants (dimensionless)'); LEGEND_CONSTANTS(:,101) = strpad('R in component constants (J_per_K_mol)'); LEGEND_CONSTANTS(:,102) = strpad('F in component constants (C_per_mmol)'); LEGEND_CONSTANTS(:,103) = strpad('z_Ca in component constants (dimensionless)'); LEGEND_CONSTANTS(:,104) = strpad('z_Na in component constants (dimensionless)'); LEGEND_CONSTANTS(:,105) = strpad('z_K in component constants (dimensionless)'); LEGEND_CONSTANTS(:,106) = strpad('R in component constants (J_per_K_mol)'); LEGEND_CONSTANTS(:,107) = strpad('F in component constants (C_per_mmol)'); LEGEND_CONSTANTS(:,108) = strpad('z_K in component constants (dimensionless)'); LEGEND_CONSTANTS(:,109) = strpad('z_Na in component constants (dimensionless)'); LEGEND_CONSTANTS(:,110) = strpad('z_Ca in component constants (dimensionless)'); LEGEND_CONSTANTS(:,111) = strpad('R in component constants (J_per_K_mol)'); LEGEND_CONSTANTS(:,112) = strpad('F in component constants (C_per_mmol)'); LEGEND_CONSTANTS(:,113) = strpad('z_K in component constants (dimensionless)'); LEGEND_CONSTANTS(:,114) = strpad('z_Na in component constants (dimensionless)'); LEGEND_CONSTANTS(:,115) = strpad('z_Ca in component constants (dimensionless)'); LEGEND_CONSTANTS(:,116) = strpad('R in component constants (J_per_K_mol)'); LEGEND_CONSTANTS(:,117) = strpad('F in component constants (C_per_mmol)'); LEGEND_CONSTANTS(:,118) = strpad('z_Na in component constants (dimensionless)'); LEGEND_CONSTANTS(:,119) = strpad('z_Ca in component constants (dimensionless)'); LEGEND_CONSTANTS(:,120) = strpad('z_K in component constants (dimensionless)'); LEGEND_CONSTANTS(:,121) = strpad('R in component constants (J_per_K_mol)'); LEGEND_CONSTANTS(:,122) = strpad('F in component constants (C_per_mmol)'); LEGEND_CONSTANTS(:,123) = strpad('z_Na in component constants (dimensionless)'); LEGEND_CONSTANTS(:,124) = strpad('z_Ca in component constants (dimensionless)'); LEGEND_CONSTANTS(:,125) = strpad('z_K in component constants (dimensionless)'); LEGEND_CONSTANTS(:,126) = strpad('R in component constants (J_per_K_mol)'); LEGEND_CONSTANTS(:,127) = strpad('F in component constants (C_per_mmol)'); LEGEND_CONSTANTS(:,128) = strpad('z_K in component constants (dimensionless)'); LEGEND_CONSTANTS(:,129) = strpad('z_Na in component constants (dimensionless)'); LEGEND_CONSTANTS(:,130) = strpad('z_Ca in component constants (dimensionless)'); LEGEND_RATES(:,1) = strpad('d/dt V in component Membrane_potential (mV)'); LEGEND_RATES(:,12) = strpad('d/dt Cai_total in component Cai (mM)'); LEGEND_RATES(:,2) = strpad('d/dt Cai in component Cai (mM)'); LEGEND_RATES(:,3) = strpad('d/dt Nai in component Nai (mM)'); LEGEND_RATES(:,4) = strpad('d/dt Ki in component Ki (mM)'); LEGEND_RATES(:,16) = strpad('d/dt C3 in component ICaL_channel_states (dimensionless)'); LEGEND_RATES(:,15) = strpad('d/dt C2 in component ICaL_channel_states (dimensionless)'); LEGEND_RATES(:,14) = strpad('d/dt C1 in component ICaL_channel_states (dimensionless)'); LEGEND_RATES(:,13) = strpad('d/dt C0 in component ICaL_channel_states (dimensionless)'); LEGEND_RATES(:,20) = strpad('d/dt C3Ca in component ICaL_channel_states (dimensionless)'); LEGEND_RATES(:,19) = strpad('d/dt C2Ca in component ICaL_channel_states (dimensionless)'); LEGEND_RATES(:,18) = strpad('d/dt C1Ca in component ICaL_channel_states (dimensionless)'); LEGEND_RATES(:,17) = strpad('d/dt C0Ca in component ICaL_channel_states (dimensionless)'); LEGEND_RATES(:,5) = strpad('d/dt O_CaL in component ICaL_channel_states (dimensionless)'); LEGEND_RATES(:,21) = strpad('d/dt ICa in component ICaL_channel_states (dimensionless)'); LEGEND_RATES(:,22) = strpad('d/dt IVs in component ICaL_channel_states (dimensionless)'); LEGEND_RATES(:,23) = strpad('d/dt IVf in component ICaL_channel_states (dimensionless)'); LEGEND_RATES(:,25) = strpad('d/dt IVsCa in component ICaL_channel_states (dimensionless)'); LEGEND_RATES(:,24) = strpad('d/dt IVfCa in component ICaL_channel_states (dimensionless)'); LEGEND_RATES(:,8) = strpad('d/dt X in component gating_kinetics (dimensionless)'); LEGEND_RATES(:,9) = strpad('d/dt X in component gating_kinetics (dimensionless)'); LEGEND_RATES(:,10) = strpad('d/dt X in component gating_kinetics (dimensionless)'); LEGEND_RATES(:,11) = strpad('d/dt X in component gating_kinetics (dimensionless)'); LEGEND_RATES(:,30) = strpad('d/dt C4 in component IBK_channel_states (dimensionless)'); LEGEND_RATES(:,29) = strpad('d/dt C3 in component IBK_channel_states (dimensionless)'); LEGEND_RATES(:,28) = strpad('d/dt C2 in component IBK_channel_states (dimensionless)'); LEGEND_RATES(:,27) = strpad('d/dt C1 in component IBK_channel_states (dimensionless)'); LEGEND_RATES(:,26) = strpad('d/dt C0 in component IBK_channel_states (dimensionless)'); LEGEND_RATES(:,6) = strpad('d/dt O4 in component IBK_channel_states (dimensionless)'); LEGEND_RATES(:,34) = strpad('d/dt O3 in component IBK_channel_states (dimensionless)'); LEGEND_RATES(:,33) = strpad('d/dt O2 in component IBK_channel_states (dimensionless)'); LEGEND_RATES(:,32) = strpad('d/dt O1 in component IBK_channel_states (dimensionless)'); LEGEND_RATES(:,31) = strpad('d/dt O0 in component IBK_channel_states (dimensionless)'); LEGEND_RATES(:,37) = strpad('d/dt C3 in component INa_channel_states (dimensionless)'); LEGEND_RATES(:,36) = strpad('d/dt C2 in component INa_channel_states (dimensionless)'); LEGEND_RATES(:,35) = strpad('d/dt C1 in component INa_channel_states (dimensionless)'); LEGEND_RATES(:,7) = strpad('d/dt O_Na in component INa_channel_states (dimensionless)'); LEGEND_RATES(:,39) = strpad('d/dt I2 in component INa_channel_states (dimensionless)'); LEGEND_RATES(:,38) = strpad('d/dt I1 in component INa_channel_states (dimensionless)'); LEGEND_STATES = LEGEND_STATES'; LEGEND_ALGEBRAIC = LEGEND_ALGEBRAIC'; LEGEND_RATES = LEGEND_RATES'; LEGEND_CONSTANTS = LEGEND_CONSTANTS'; end function [STATES, CONSTANTS] = initConsts() VOI = 0; CONSTANTS = []; STATES = []; ALGEBRAIC = []; CONSTANTS(:,1) = 10000; CONSTANTS(:,2) = -57; CONSTANTS(:,3) = 33.5; CONSTANTS(:,4) = 300; CONSTANTS(:,5) = 600; CONSTANTS(:,6) = 12000; CONSTANTS(:,7) = 300; CONSTANTS(:,8) = 2.6; CONSTANTS(:,9) = 310; CONSTANTS(:,10) = -73.5049651455872; CONSTANTS(:,11) = 50; CONSTANTS(:,12) = 1.44; CONSTANTS(:,13) = 8.314; CONSTANTS(:,14) = 96.48534; CONSTANTS(:,15) = 310; CONSTANTS(:,16) = 297; CONSTANTS(:,17) = 2.1; CONSTANTS(:,18) = 2; CONSTANTS(:,19) = 0.815464741971086; CONSTANTS(:,20) = 0.152399266235657; CONSTANTS(:,21) = 0.0106805060777161; CONSTANTS(:,22) = 0.000332673548872087; CONSTANTS(:,23) = 0.0175888495282545; CONSTANTS(:,24) = 0.00328711668724504; CONSTANTS(:,25) = 0.000230369020877669; CONSTANTS(:,26) = 7.1754726923539e-6; CONSTANTS(:,27) = 8.38123983500905e-8; CONSTANTS(:,28) = 1.1193313274705e-6; CONSTANTS(:,29) = 4.0998751301597e-6; CONSTANTS(:,30) = 8.84306615061238e-8; CONSTANTS(:,31) = 2.41429816075123e-8; CONSTANTS(:,32) = 3.88576045134351e-6; CONSTANTS(:,33) = 0.0425; CONSTANTS(:,34) = 0.0791635737410974; CONSTANTS(:,35) = 0.377831534375835; CONSTANTS(:,36) = 1.9508; CONSTANTS(:,37) = 1.0217; CONSTANTS(:,38) = 297; CONSTANTS(:,39) = 3.1; CONSTANTS(:,40) = 5.4; CONSTANTS(:,41) = 0.14714161078933; CONSTANTS(:,42) = 0.99994773314105; CONSTANTS(:,43) = 4.7803; CONSTANTS(:,44) = 763.7564; CONSTANTS(:,45) = 80; CONSTANTS(:,46) = 0.48379087935899; CONSTANTS(:,47) = 0.385183559520031; CONSTANTS(:,48) = 0.115002824567753; CONSTANTS(:,49) = 0.0152602714149774; CONSTANTS(:,50) = 0.000759264410974374; CONSTANTS(:,51) = 6.94960798375172e-7; CONSTANTS(:,52) = 5.55636826398253e-8; CONSTANTS(:,53) = 2.85143702125325e-8; CONSTANTS(:,54) = 1.59832806123435e-6; CONSTANTS(:,55) = 1.82113764497095e-6; CONSTANTS(:,56) = 40633; CONSTANTS(:,57) = 11; CONSTANTS(:,58) = 1.1; CONSTANTS(:,59) = 25.1; CONSTANTS(:,60) = 297; CONSTANTS(:,61) = 2.45; CONSTANTS(:,62) = 140; CONSTANTS(:,63) = 0.0119443135223679; CONSTANTS(:,64) = 0.0109545368437155; CONSTANTS(:,65) = 0.973782548650071; CONSTANTS(:,66) = 0.000126882921013389; CONSTANTS(:,67) = 0.00318975045717667; CONSTANTS(:,68) = 1.96760342050475e-6; CONSTANTS(:,69) = 1.38; CONSTANTS(:,70) = 87.5; CONSTANTS(:,71) = 0.1; CONSTANTS(:,72) = 0.35; CONSTANTS(:,73) = 1992.1865; CONSTANTS(:,74) = 1; CONSTANTS(:,75) = 40; CONSTANTS(:,76) = 16.197; CONSTANTS(:,77) = 0.022488; CONSTANTS(:,78) = 0.017512; CONSTANTS(:,79) = 1; CONSTANTS(:,80) = 4; CONSTANTS(:,81) = 0.034; CONSTANTS(:,82) = 0.012; CONSTANTS(:,83) = 0.0009; CONSTANTS(:,84) = 0.0001; CONSTANTS(:,85) = 3.5e-12; CONSTANTS(:,86) = 0.004914; CONSTANTS(:,87) = 5.38843941249284e-5; CONSTANTS(:,88) = 10.5731241425458; CONSTANTS(:,89) = 153.604280337996; CONSTANTS(:,90) = 310; CONSTANTS(:,91) = 1; CONSTANTS(:,92) = 1; CONSTANTS(:,93) = 1e-15; CONSTANTS(:,94) = 1e-15; CONSTANTS(:,95) = 1e-15; CONSTANTS(:,96) = 8.314; CONSTANTS(:,97) = 96.48534; CONSTANTS(:,98) = 2; CONSTANTS(:,99) = 1; CONSTANTS(:,100) = 1; CONSTANTS(:,101) = 8.314; CONSTANTS(:,102) = 96.48534; CONSTANTS(:,103) = 2; CONSTANTS(:,104) = 1; CONSTANTS(:,105) = 1; CONSTANTS(:,106) = 8.314; CONSTANTS(:,107) = 96.48534; CONSTANTS(:,108) = 1; CONSTANTS(:,109) = 1; CONSTANTS(:,110) = 2; CONSTANTS(:,111) = 8.314; CONSTANTS(:,112) = 96.48534; CONSTANTS(:,113) = 1; CONSTANTS(:,114) = 1; CONSTANTS(:,115) = 2; CONSTANTS(:,116) = 8.314; CONSTANTS(:,117) = 96.48534; CONSTANTS(:,118) = 1; CONSTANTS(:,119) = 2; CONSTANTS(:,120) = 1; CONSTANTS(:,121) = 8.314; CONSTANTS(:,122) = 96.48534; CONSTANTS(:,123) = 1; CONSTANTS(:,124) = 2; CONSTANTS(:,125) = 1; CONSTANTS(:,126) = 8.314; CONSTANTS(:,127) = 96.48534; CONSTANTS(:,128) = 1; CONSTANTS(:,129) = 1; CONSTANTS(:,130) = 2; CONSTANTS(:,131) = power(CONSTANTS(:,17), (CONSTANTS(:,9) - CONSTANTS(:,15))./10.0000); CONSTANTS(:,132) = power(CONSTANTS(:,17), (CONSTANTS(:,9) - CONSTANTS(:,16))./10.0000); CONSTANTS(:,133) = power(CONSTANTS(:,17), (CONSTANTS(:,9) - CONSTANTS(:,16))./10.0000); CONSTANTS(:,134) = power(CONSTANTS(:,39), (CONSTANTS(:,9) - CONSTANTS(:,38))./10.0000); CONSTANTS(:,135) = power(CONSTANTS(:,39), (CONSTANTS(:,9) - CONSTANTS(:,38))./10.0000); CONSTANTS(:,136) = 4.00000.*CONSTANTS(:,57); CONSTANTS(:,137) = 3.00000.*CONSTANTS(:,57); CONSTANTS(:,138) = 2.00000.*CONSTANTS(:,57); CONSTANTS(:,139) = 1.00000.*CONSTANTS(:,57); CONSTANTS(:,140) = 4.00000.*CONSTANTS(:,58); CONSTANTS(:,141) = 3.00000.*CONSTANTS(:,58); CONSTANTS(:,142) = 2.00000.*CONSTANTS(:,58); CONSTANTS(:,143) = 1.00000.*CONSTANTS(:,58); CONSTANTS(:,144) = power(CONSTANTS(:,61), (CONSTANTS(:,9) - CONSTANTS(:,60))./10.0000); CONSTANTS(:,145) = CONSTANTS(:,131).*0.0100000; STATES(:,1) = CONSTANTS(:,10); STATES(:,2) = CONSTANTS(:,87); STATES(:,3) = CONSTANTS(:,88); STATES(:,4) = CONSTANTS(:,89); STATES(:,5) = CONSTANTS(:,32); STATES(:,6) = CONSTANTS(:,55); STATES(:,7) = CONSTANTS(:,68); STATES(:,8) = CONSTANTS(:,34); STATES(:,9) = CONSTANTS(:,35); STATES(:,10) = CONSTANTS(:,41); STATES(:,11) = CONSTANTS(:,42); STATES(:,12) = CONSTANTS(:,86); STATES(:,13) = CONSTANTS(:,19); STATES(:,14) = CONSTANTS(:,20); STATES(:,15) = CONSTANTS(:,21); STATES(:,16) = CONSTANTS(:,22); STATES(:,17) = CONSTANTS(:,23); STATES(:,18) = CONSTANTS(:,24); STATES(:,19) = CONSTANTS(:,25); STATES(:,20) = CONSTANTS(:,26); STATES(:,21) = CONSTANTS(:,27); STATES(:,22) = CONSTANTS(:,28); STATES(:,23) = CONSTANTS(:,29); STATES(:,24) = CONSTANTS(:,30); STATES(:,25) = CONSTANTS(:,30); STATES(:,26) = CONSTANTS(:,46); STATES(:,27) = CONSTANTS(:,47); STATES(:,28) = CONSTANTS(:,48); STATES(:,29) = CONSTANTS(:,49); STATES(:,30) = CONSTANTS(:,50); STATES(:,31) = CONSTANTS(:,51); STATES(:,32) = CONSTANTS(:,52); STATES(:,33) = CONSTANTS(:,53); STATES(:,34) = CONSTANTS(:,54); STATES(:,35) = CONSTANTS(:,63); STATES(:,36) = CONSTANTS(:,64); STATES(:,37) = CONSTANTS(:,65); STATES(:,38) = CONSTANTS(:,66); STATES(:,39) = CONSTANTS(:,67); if (isempty(STATES)), warning('Initial values for states not set');, end end function [RATES, ALGEBRAIC] = computeRates(VOI, STATES, CONSTANTS) global algebraicVariableCount; statesSize = size(STATES); statesColumnCount = statesSize(2); if ( statesColumnCount == 1) STATES = STATES'; ALGEBRAIC = zeros(1, algebraicVariableCount); utilOnes = 1; else statesRowCount = statesSize(1); ALGEBRAIC = zeros(statesRowCount, algebraicVariableCount); RATES = zeros(statesRowCount, statesColumnCount); utilOnes = ones(statesRowCount, 1); end ALGEBRAIC(:,3) = 1.00000./(1.00000+exp( - (STATES(:,1)+60.5000)./5.30000)); RATES(:,8) = ((ALGEBRAIC(:,3) - STATES(:,8))./CONSTANTS(:,36)).*CONSTANTS(:,132); ALGEBRAIC(:,5) = 1.00000./(1.00000+exp( - (STATES(:,1)+43.0000)./17.3600)); RATES(:,10) = ((ALGEBRAIC(:,5) - STATES(:,10))./CONSTANTS(:,43)).*CONSTANTS(:,134); ALGEBRAIC(:,6) = 1.00000./(1.00000+exp((STATES(:,1) - 44.9000)./12.0096)); RATES(:,11) = ((ALGEBRAIC(:,6) - STATES(:,11))./CONSTANTS(:,44)).*CONSTANTS(:,135); ALGEBRAIC(:,4) = 1.00000./(1.00000+exp((STATES(:,1)+75.5000)./4.00000)); ALGEBRAIC(:,11) = 0.381170.*(8.60000+ 14.7000.*exp( - power(STATES(:,1)+50.0000, 2.00000)./( 900.000.*1.00000))); RATES(:,9) = ((ALGEBRAIC(:,4) - STATES(:,9))./ALGEBRAIC(:,11)).*CONSTANTS(:,133); ALGEBRAIC(:,34) = (( CONSTANTS(:,96).*CONSTANTS(:,9))./( CONSTANTS(:,98).*CONSTANTS(:,97))).*log(CONSTANTS(:,18)./STATES(:,2)); ALGEBRAIC(:,38) = CONSTANTS(:,12).*STATES(:,5).*(STATES(:,1) - ALGEBRAIC(:,34)); ALGEBRAIC(:,18) = STATES(:,8).*STATES(:,9); ALGEBRAIC(:,42) = (( CONSTANTS(:,101).*CONSTANTS(:,9))./( CONSTANTS(:,103).*CONSTANTS(:,102))).*log(CONSTANTS(:,18)./STATES(:,2)); ALGEBRAIC(:,46) = CONSTANTS(:,33).*ALGEBRAIC(:,18).*(STATES(:,1) - ALGEBRAIC(:,42)); ALGEBRAIC(:,26) = ( CONSTANTS(:,73).*( exp(( CONSTANTS(:,72).*STATES(:,1).*CONSTANTS(:,14))./( CONSTANTS(:,13).*CONSTANTS(:,9))).*power(STATES(:,3), 3.00000).*CONSTANTS(:,18) - 2.50000.*exp(( (CONSTANTS(:,72) - 1.00000).*STATES(:,1).*CONSTANTS(:,14))./( CONSTANTS(:,13).*CONSTANTS(:,9))).*power(CONSTANTS(:,62), 3.00000).*STATES(:,2)))./( (power(CONSTANTS(:,70), 3.00000)+power(CONSTANTS(:,62), 3.00000)).*(CONSTANTS(:,69)+CONSTANTS(:,18)).*(1.00000+ CONSTANTS(:,71).*exp(( (CONSTANTS(:,72) - 1.00000).*STATES(:,1).*CONSTANTS(:,14))./( CONSTANTS(:,13).*CONSTANTS(:,9))))); RATES(:,12) = ( - ((ALGEBRAIC(:,38)+ALGEBRAIC(:,46)) - 2.00000.*ALGEBRAIC(:,26)).*CONSTANTS(:,93))./( 2.00000.*CONSTANTS(:,14).*CONSTANTS(:,85)); ALGEBRAIC(:,53) = ( - ((ALGEBRAIC(:,38)+ALGEBRAIC(:,46)) - 2.00000.*ALGEBRAIC(:,26)).*CONSTANTS(:,93))./( 2.00000.*CONSTANTS(:,14).*CONSTANTS(:,85)); RATES(:,2) = ALGEBRAIC(:,53)./(1.00000+( CONSTANTS(:,79).*CONSTANTS(:,81).*CONSTANTS(:,83).*power(STATES(:,2), CONSTANTS(:,79) - 1.00000))./power(power(STATES(:,2), CONSTANTS(:,79))+CONSTANTS(:,83), 2.00000)+( CONSTANTS(:,80).*CONSTANTS(:,82).*CONSTANTS(:,84).*power(STATES(:,2), CONSTANTS(:,80) - 1.00000))./power(power(STATES(:,2), CONSTANTS(:,80))+CONSTANTS(:,84), 2.00000)); ALGEBRAIC(:,57) = STATES(:,7)+STATES(:,35)+STATES(:,36)+STATES(:,37)+STATES(:,38)+STATES(:,39); ALGEBRAIC(:,25) = CONSTANTS(:,144).*0.554320.*exp( - 0.0990740+ 0.0364410.*STATES(:,1)); ALGEBRAIC(:,29) = CONSTANTS(:,144).*0.000525480.*exp( - 0.0691020+ 0.00319450.*STATES(:,1)); RATES(:,37) = ( - ALGEBRAIC(:,29).*STATES(:,37))./ALGEBRAIC(:,57)+( ALGEBRAIC(:,25).*STATES(:,36))./ALGEBRAIC(:,57); ALGEBRAIC(:,21) = CONSTANTS(:,144).*3.15660.*exp(0.363520+ 0.0771930.*STATES(:,1)); ALGEBRAIC(:,31) = CONSTANTS(:,144).*1.44960.*exp( - 0.156600+ 0.0583530.*STATES(:,1)); RATES(:,36) = ( - (ALGEBRAIC(:,31)+ALGEBRAIC(:,25)).*STATES(:,36))./ALGEBRAIC(:,57)+( ALGEBRAIC(:,21).*STATES(:,35))./ALGEBRAIC(:,57)+( ALGEBRAIC(:,29).*STATES(:,37))./ALGEBRAIC(:,57); ALGEBRAIC(:,17) = CONSTANTS(:,144).*2.39100.*exp( - 13.3350 - 0.252890.*STATES(:,1)); ALGEBRAIC(:,36) = CONSTANTS(:,144).*1.53290.*exp(0.00931930+ 0.0410750.*STATES(:,1)); ALGEBRAIC(:,48) = CONSTANTS(:,144).*1.90460.*exp( - 2.48400+ 0.0204060.*STATES(:,1)); ALGEBRAIC(:,52) = CONSTANTS(:,144).*0.000216880.*exp( - 0.0634380+ 0.00466830.*STATES(:,1)); RATES(:,35) = ( - (ALGEBRAIC(:,21)+ALGEBRAIC(:,36)+ALGEBRAIC(:,52)).*STATES(:,35))./ALGEBRAIC(:,57)+( ALGEBRAIC(:,17).*STATES(:,7))./ALGEBRAIC(:,57)+( ALGEBRAIC(:,31).*STATES(:,36))./ALGEBRAIC(:,57)+( ALGEBRAIC(:,48).*STATES(:,38))./ALGEBRAIC(:,57); ALGEBRAIC(:,13) = CONSTANTS(:,144).*0.120520.*exp( - 9.60280+ 0.0830250.*STATES(:,1)); ALGEBRAIC(:,40) = CONSTANTS(:,144).*1.61640.*exp(0.307630+ 0.00605350.*STATES(:,1)); RATES(:,7) = ( - (ALGEBRAIC(:,17)+ALGEBRAIC(:,40)).*STATES(:,7))./ALGEBRAIC(:,57)+( ALGEBRAIC(:,36).*STATES(:,35))./ALGEBRAIC(:,57)+( ALGEBRAIC(:,13).*STATES(:,38))./ALGEBRAIC(:,57); ALGEBRAIC(:,8) = CONSTANTS(:,144).*0.00392390.*exp(2.67930+ 0.00614680.*STATES(:,1)); ALGEBRAIC(:,44) = CONSTANTS(:,144).*0.0277350.*exp(0.0514900 - 0.0468650.*STATES(:,1)); RATES(:,39) = ( - ALGEBRAIC(:,8).*STATES(:,39))./ALGEBRAIC(:,57)+( ALGEBRAIC(:,44).*STATES(:,38))./ALGEBRAIC(:,57); RATES(:,38) = ( - (ALGEBRAIC(:,13)+ALGEBRAIC(:,44)+ALGEBRAIC(:,48)).*STATES(:,38))./ALGEBRAIC(:,57)+( ALGEBRAIC(:,8).*STATES(:,39))./ALGEBRAIC(:,57)+( ALGEBRAIC(:,52).*STATES(:,35))./ALGEBRAIC(:,57)+( ALGEBRAIC(:,40).*STATES(:,7))./ALGEBRAIC(:,57); ALGEBRAIC(:,65) = (( CONSTANTS(:,116).*CONSTANTS(:,9))./( CONSTANTS(:,118).*CONSTANTS(:,117))).*log(CONSTANTS(:,62)./STATES(:,3)); ALGEBRAIC(:,68) = CONSTANTS(:,59).*STATES(:,7).*(STATES(:,1) - ALGEBRAIC(:,65)); ALGEBRAIC(:,30) = ( CONSTANTS(:,76).*CONSTANTS(:,40).*STATES(:,3))./( (CONSTANTS(:,40)+CONSTANTS(:,74)).*(CONSTANTS(:,75)+STATES(:,3)).*(1.00000+ 0.124500.*exp(( - 0.100000.*STATES(:,1).*CONSTANTS(:,14))./( CONSTANTS(:,13).*CONSTANTS(:,9)))+ 0.0353000.*exp(( - STATES(:,1).*CONSTANTS(:,14))./( CONSTANTS(:,13).*CONSTANTS(:,9))))); ALGEBRAIC(:,71) = (( CONSTANTS(:,121).*CONSTANTS(:,9))./( CONSTANTS(:,123).*CONSTANTS(:,122))).*log(CONSTANTS(:,62)./STATES(:,3)); ALGEBRAIC(:,74) = CONSTANTS(:,77).*CONSTANTS(:,91).*(STATES(:,1) - ALGEBRAIC(:,71)); RATES(:,3) = ( - (ALGEBRAIC(:,68)+ 3.00000.*ALGEBRAIC(:,30)+ 3.00000.*ALGEBRAIC(:,26)+ALGEBRAIC(:,74)).*CONSTANTS(:,94))./( CONSTANTS(:,14).*CONSTANTS(:,85)); ALGEBRAIC(:,1) = rem(VOI, CONSTANTS(:,1)); ALGEBRAIC(:,9) = piecewise({ALGEBRAIC(:,1) req_length strout = strin(1:req_length); else strout = [strin, blanks(req_length - insize)]; end end