Model Mathematics

Component: environment

ddtimeq_DAG=v_R2b_PLC+v_R3b_PLC-v_R0_PLC ddtimeq_PC=v_R0_PLC ddtimeq_IP3=v_R2b_PLC+v_R3b_PLC-v_R1_PLC ddtimeq_Ino=v_R1_PLC ddtimeq_PLC=-v_R4_PLC-v_R5_PLC ddtimeq_Gq=-v_R5_PLC+v_R7_PLC+Gq_stim ddtimeq_Ca=-v_R4_PLC-v_R6_PLC ddtimeq_Gq_PLC=v_R5_PLC-v_R6_PLC ddtimeq_Ca_PLC=-v_R2a_PLC+v_R2b_PLC+v_R4_PLC+v_R7_PLC+v_R8_PLC ddtimeq_Ca_Gq_PLC=-v_R3a_PLC+v_R3b_PLC+v_R6_PLC-v_R7_PLC-v_R8_PLC ddtimeq_G_GDP=v_R8_PLC ddtimeq_PIP2=-v_R2a_PLC-v_R3a_PLC ddtimeq_CaPLC_PIP2=v_R2a_PLC-v_R2b_PLC ddtimeq_CaGqPLC_PIP2=v_R3a_PLC-v_R3b_PLC tPeriod=time-timestimPeriodstimPeriod Gq_stim=0100iftPeriod0.3tPeriod0.3+stimDuration0.0otherwise cGq=q_Gqvol_myo cCa=q_Cavol_myo cDAG=q_DAGvol_myo cIP3=q_IP3vol_myo

Component: PLC_parameters

Component: PLC

mu_DAG=RTlnK_DAGq_DAG mu_PC=RTlnK_PCq_PC mu_IP3=RTlnK_IP3q_IP3 mu_Ino=RTlnK_Inoq_Ino mu_PLC=RTlnK_PLCq_PLC mu_Gq=RTlnK_Gqq_Gq mu_Ca=RTlnK_Caq_Ca mu_Gq_PLC=RTlnK_Gq_PLCq_Gq_PLC mu_Ca_PLC=RTlnK_Ca_PLCq_Ca_PLC mu_Ca_Gq_PLC=RTlnK_Ca_Gq_PLCq_Ca_Gq_PLC mu_G_GDP=RTlnK_G_GDPq_G_GDP mu_PIP2=RTlnK_PIP2q_PIP2 mu_CaPLC_PIP2=RTlnK_CaPLC_PIP2q_CaPLC_PIP2 mu_CaGqPLC_PIP2=RTlnK_CaGqPLC_PIP2q_CaGqPLC_PIP2 v_R0_PLC=kappa_R0_PLCmu_DAGRT-mu_PCRT v_R1_PLC=kappa_R1_PLCmu_IP3RT-mu_InoRT v_R2a_PLC=kappa_R2a_PLCmu_PIP2+mu_Ca_PLCRT-mu_CaPLC_PIP2RT v_R2b_PLC=kappa_R2b_PLCmu_CaPLC_PIP2RT-mu_DAG+mu_IP3+mu_Ca_PLCRT v_R3a_PLC=kappa_R3a_PLCmu_PIP2+mu_Ca_Gq_PLCRT-mu_CaGqPLC_PIP2RT v_R3b_PLC=kappa_R3b_PLCmu_CaGqPLC_PIP2RT-mu_DAG+mu_IP3+mu_Ca_Gq_PLCRT v_R4_PLC=kappa_R4_PLCmu_PLC+mu_CaRT-mu_Ca_PLCRT v_R5_PLC=kappa_R5_PLCmu_PLC+mu_GqRT-mu_Gq_PLCRT v_R6_PLC=kappa_R6_PLCmu_Gq_PLC+mu_CaRT-mu_Ca_Gq_PLCRT v_R7_PLC=kappa_R7_PLCmu_Ca_Gq_PLCRT-mu_Gq+mu_Ca_PLCRT v_R8_PLC=kappa_R8_PLCmu_Ca_Gq_PLCRT-mu_G_GDP+mu_Ca_PLCRT

Component: units

Component: constants