Generated Code
The following is matlab code generated by the CellML API from this CellML file. (Back to language selection)
The raw code is available.
function [VOI, STATES, ALGEBRAIC, CONSTANTS] = mainFunction()
% This is the "main function". In Matlab, things work best if you rename this function to match the filename.
[VOI, STATES, ALGEBRAIC, CONSTANTS] = solveModel();
end
function [algebraicVariableCount] = getAlgebraicVariableCount()
% Used later when setting a global variable with the number of algebraic variables.
% Note: This is not the "main method".
algebraicVariableCount =80;
end
% There are a total of 25 entries in each of the rate and state variable arrays.
% There are a total of 160 entries in the constant variable array.
%
function [VOI, STATES, ALGEBRAIC, CONSTANTS] = solveModel()
% Create ALGEBRAIC of correct size
global algebraicVariableCount; algebraicVariableCount = getAlgebraicVariableCount();
% Initialise constants and state variables
[INIT_STATES, CONSTANTS] = initConsts;
% Set timespan to solve over
tspan = [0, 10];
% Set numerical accuracy options for ODE solver
options = odeset('RelTol', 1e-06, 'AbsTol', 1e-06, 'MaxStep', 1);
% Solve model with ODE solver
[VOI, STATES] = ode15s(@(VOI, STATES)computeRates(VOI, STATES, CONSTANTS), tspan, INIT_STATES, options);
% Compute algebraic variables
[RATES, ALGEBRAIC] = computeRates(VOI, STATES, CONSTANTS);
ALGEBRAIC = computeAlgebraic(ALGEBRAIC, CONSTANTS, STATES, VOI);
% Plot state variables against variable of integration
[LEGEND_STATES, LEGEND_ALGEBRAIC, LEGEND_VOI, LEGEND_CONSTANTS] = createLegends();
figure();
plot(VOI, STATES);
xlabel(LEGEND_VOI);
l = legend(LEGEND_STATES);
set(l,'Interpreter','none');
end
function [LEGEND_STATES, LEGEND_ALGEBRAIC, LEGEND_VOI, LEGEND_CONSTANTS] = createLegends()
LEGEND_STATES = ''; LEGEND_ALGEBRAIC = ''; LEGEND_VOI = ''; LEGEND_CONSTANTS = '';
LEGEND_ALGEBRAIC(:,1) = strpad('sum_g_syn_e_s_1 in component synaptic_coupling (nanoS)');
LEGEND_ALGEBRAIC(:,6) = strpad('sum_g_syn_e_s_2 in component synaptic_coupling (nanoS)');
LEGEND_ALGEBRAIC(:,11) = strpad('sum_g_syn_e_s_3 in component synaptic_coupling (nanoS)');
LEGEND_ALGEBRAIC(:,16) = strpad('sum_g_syn_e_s_4 in component synaptic_coupling (nanoS)');
LEGEND_ALGEBRAIC(:,21) = strpad('sum_g_syn_e_s_5 in component synaptic_coupling (nanoS)');
LEGEND_CONSTANTS(:,1) = strpad('g_syn_e_1_2 in component synaptic_coupling (nanoS)');
LEGEND_CONSTANTS(:,2) = strpad('g_syn_e_1_3 in component synaptic_coupling (nanoS)');
LEGEND_CONSTANTS(:,3) = strpad('g_syn_e_1_4 in component synaptic_coupling (nanoS)');
LEGEND_CONSTANTS(:,4) = strpad('g_syn_e_1_5 in component synaptic_coupling (nanoS)');
LEGEND_CONSTANTS(:,5) = strpad('g_syn_e_2_1 in component synaptic_coupling (nanoS)');
LEGEND_CONSTANTS(:,6) = strpad('g_syn_e_2_3 in component synaptic_coupling (nanoS)');
LEGEND_CONSTANTS(:,7) = strpad('g_syn_e_2_4 in component synaptic_coupling (nanoS)');
LEGEND_CONSTANTS(:,8) = strpad('g_syn_e_2_5 in component synaptic_coupling (nanoS)');
LEGEND_CONSTANTS(:,9) = strpad('g_syn_e_3_1 in component synaptic_coupling (nanoS)');
LEGEND_CONSTANTS(:,10) = strpad('g_syn_e_3_2 in component synaptic_coupling (nanoS)');
LEGEND_CONSTANTS(:,11) = strpad('g_syn_e_3_4 in component synaptic_coupling (nanoS)');
LEGEND_CONSTANTS(:,12) = strpad('g_syn_e_3_5 in component synaptic_coupling (nanoS)');
LEGEND_CONSTANTS(:,13) = strpad('g_syn_e_4_1 in component synaptic_coupling (nanoS)');
LEGEND_CONSTANTS(:,14) = strpad('g_syn_e_4_2 in component synaptic_coupling (nanoS)');
LEGEND_CONSTANTS(:,15) = strpad('g_syn_e_4_3 in component synaptic_coupling (nanoS)');
LEGEND_CONSTANTS(:,16) = strpad('g_syn_e_4_5 in component synaptic_coupling (nanoS)');
LEGEND_CONSTANTS(:,17) = strpad('g_syn_e_5_1 in component synaptic_coupling (nanoS)');
LEGEND_CONSTANTS(:,18) = strpad('g_syn_e_5_2 in component synaptic_coupling (nanoS)');
LEGEND_CONSTANTS(:,19) = strpad('g_syn_e_5_3 in component synaptic_coupling (nanoS)');
LEGEND_CONSTANTS(:,20) = strpad('g_syn_e_5_4 in component synaptic_coupling (nanoS)');
LEGEND_STATES(:,1) = strpad('s in component synaptic_input (dimensionless)');
LEGEND_STATES(:,2) = strpad('s in component synaptic_input (dimensionless)');
LEGEND_STATES(:,3) = strpad('s in component synaptic_input (dimensionless)');
LEGEND_STATES(:,4) = strpad('s in component synaptic_input (dimensionless)');
LEGEND_STATES(:,5) = strpad('s in component synaptic_input (dimensionless)');
LEGEND_VOI = strpad('time in component environment (millisecond)');
LEGEND_STATES(:,6) = strpad('V in component membrane (millivolt)');
LEGEND_CONSTANTS(:,21) = strpad('C in component membrane (picoF)');
LEGEND_CONSTANTS(:,22) = strpad('i_app in component membrane (picoA)');
LEGEND_ALGEBRAIC(:,61) = strpad('i_NaP in component persistent_sodium_current (picoA)');
LEGEND_ALGEBRAIC(:,46) = strpad('i_Na in component fast_sodium_current (picoA)');
LEGEND_ALGEBRAIC(:,51) = strpad('i_K in component potassium_current (picoA)');
LEGEND_ALGEBRAIC(:,66) = strpad('i_L in component leakage_current (picoA)');
LEGEND_ALGEBRAIC(:,71) = strpad('i_tonic_e in component tonic_current (picoA)');
LEGEND_ALGEBRAIC(:,76) = strpad('i_syn_e in component synaptic_input (picoA)');
LEGEND_CONSTANTS(:,23) = strpad('E_Na in component fast_sodium_current (millivolt)');
LEGEND_CONSTANTS(:,24) = strpad('g_Na in component fast_sodium_current (nanoS)');
LEGEND_ALGEBRAIC(:,26) = strpad('m_infinity in component fast_sodium_current_m_gate (dimensionless)');
LEGEND_STATES(:,7) = strpad('n in component fast_sodium_current_n_gate (dimensionless)');
LEGEND_CONSTANTS(:,25) = strpad('theta_m in component fast_sodium_current_m_gate (millivolt)');
LEGEND_CONSTANTS(:,26) = strpad('sigma_m in component fast_sodium_current_m_gate (millivolt)');
LEGEND_ALGEBRAIC(:,2) = strpad('n_infinity in component fast_sodium_current_n_gate (dimensionless)');
LEGEND_ALGEBRAIC(:,27) = strpad('tau_n in component fast_sodium_current_n_gate (millisecond)');
LEGEND_CONSTANTS(:,27) = strpad('tau_n_max in component fast_sodium_current_n_gate (millisecond)');
LEGEND_CONSTANTS(:,28) = strpad('theta_n in component fast_sodium_current_n_gate (millivolt)');
LEGEND_CONSTANTS(:,29) = strpad('sigma_n in component fast_sodium_current_n_gate (millivolt)');
LEGEND_CONSTANTS(:,30) = strpad('g_K in component potassium_current (nanoS)');
LEGEND_CONSTANTS(:,31) = strpad('E_K in component potassium_current (millivolt)');
LEGEND_STATES(:,8) = strpad('n in component potassium_current_n_gate (dimensionless)');
LEGEND_ALGEBRAIC(:,3) = strpad('n_infinity in component potassium_current_n_gate (dimensionless)');
LEGEND_ALGEBRAIC(:,28) = strpad('tau_n in component potassium_current_n_gate (millisecond)');
LEGEND_CONSTANTS(:,32) = strpad('tau_n_max in component potassium_current_n_gate (millisecond)');
LEGEND_CONSTANTS(:,33) = strpad('theta_n in component potassium_current_n_gate (millivolt)');
LEGEND_CONSTANTS(:,34) = strpad('sigma_n in component potassium_current_n_gate (millivolt)');
LEGEND_CONSTANTS(:,35) = strpad('g_NaP in component persistent_sodium_current (nanoS)');
LEGEND_ALGEBRAIC(:,56) = strpad('m_infinity in component persistent_sodium_current_m_gate (dimensionless)');
LEGEND_STATES(:,9) = strpad('h in component persistent_sodium_current_h_gate (dimensionless)');
LEGEND_CONSTANTS(:,36) = strpad('theta_m in component persistent_sodium_current_m_gate (millivolt)');
LEGEND_CONSTANTS(:,37) = strpad('sigma_m in component persistent_sodium_current_m_gate (millivolt)');
LEGEND_ALGEBRAIC(:,4) = strpad('h_infinity in component persistent_sodium_current_h_gate (dimensionless)');
LEGEND_ALGEBRAIC(:,29) = strpad('tau_h in component persistent_sodium_current_h_gate (millisecond)');
LEGEND_CONSTANTS(:,38) = strpad('tau_h_max in component persistent_sodium_current_h_gate (millisecond)');
LEGEND_CONSTANTS(:,39) = strpad('theta_h in component persistent_sodium_current_h_gate (millivolt)');
LEGEND_CONSTANTS(:,40) = strpad('sigma_h in component persistent_sodium_current_h_gate (millivolt)');
LEGEND_CONSTANTS(:,41) = strpad('g_L in component leakage_current (nanoS)');
LEGEND_CONSTANTS(:,42) = strpad('E_L in component leakage_current (millivolt)');
LEGEND_CONSTANTS(:,43) = strpad('E_syn_e in component tonic_current (millivolt)');
LEGEND_CONSTANTS(:,44) = strpad('g_tonic_e in component tonic_current (nanoS)');
LEGEND_ALGEBRAIC(:,5) = strpad('s_infinity in component synaptic_input (dimensionless)');
LEGEND_CONSTANTS(:,45) = strpad('kr in component synaptic_input (dimensionless)');
LEGEND_CONSTANTS(:,46) = strpad('tau_s in component synaptic_input (millisecond)');
LEGEND_CONSTANTS(:,47) = strpad('sigma_s in component synaptic_input (millivolt)');
LEGEND_CONSTANTS(:,48) = strpad('theta_s in component synaptic_input (millivolt)');
LEGEND_VOI = strpad('time in component environment (millisecond)');
LEGEND_STATES(:,10) = strpad('V in component membrane (millivolt)');
LEGEND_CONSTANTS(:,49) = strpad('C in component membrane (picoF)');
LEGEND_CONSTANTS(:,50) = strpad('i_app in component membrane (picoA)');
LEGEND_ALGEBRAIC(:,62) = strpad('i_NaP in component persistent_sodium_current (picoA)');
LEGEND_ALGEBRAIC(:,47) = strpad('i_Na in component fast_sodium_current (picoA)');
LEGEND_ALGEBRAIC(:,52) = strpad('i_K in component potassium_current (picoA)');
LEGEND_ALGEBRAIC(:,67) = strpad('i_L in component leakage_current (picoA)');
LEGEND_ALGEBRAIC(:,72) = strpad('i_tonic_e in component tonic_current (picoA)');
LEGEND_ALGEBRAIC(:,77) = strpad('i_syn_e in component synaptic_input (picoA)');
LEGEND_CONSTANTS(:,51) = strpad('E_Na in component fast_sodium_current (millivolt)');
LEGEND_CONSTANTS(:,52) = strpad('g_Na in component fast_sodium_current (nanoS)');
LEGEND_ALGEBRAIC(:,30) = strpad('m_infinity in component fast_sodium_current_m_gate (dimensionless)');
LEGEND_STATES(:,11) = strpad('n in component fast_sodium_current_n_gate (dimensionless)');
LEGEND_CONSTANTS(:,53) = strpad('theta_m in component fast_sodium_current_m_gate (millivolt)');
LEGEND_CONSTANTS(:,54) = strpad('sigma_m in component fast_sodium_current_m_gate (millivolt)');
LEGEND_ALGEBRAIC(:,7) = strpad('n_infinity in component fast_sodium_current_n_gate (dimensionless)');
LEGEND_ALGEBRAIC(:,31) = strpad('tau_n in component fast_sodium_current_n_gate (millisecond)');
LEGEND_CONSTANTS(:,55) = strpad('tau_n_max in component fast_sodium_current_n_gate (millisecond)');
LEGEND_CONSTANTS(:,56) = strpad('theta_n in component fast_sodium_current_n_gate (millivolt)');
LEGEND_CONSTANTS(:,57) = strpad('sigma_n in component fast_sodium_current_n_gate (millivolt)');
LEGEND_CONSTANTS(:,58) = strpad('g_K in component potassium_current (nanoS)');
LEGEND_CONSTANTS(:,59) = strpad('E_K in component potassium_current (millivolt)');
LEGEND_STATES(:,12) = strpad('n in component potassium_current_n_gate (dimensionless)');
LEGEND_ALGEBRAIC(:,8) = strpad('n_infinity in component potassium_current_n_gate (dimensionless)');
LEGEND_ALGEBRAIC(:,32) = strpad('tau_n in component potassium_current_n_gate (millisecond)');
LEGEND_CONSTANTS(:,60) = strpad('tau_n_max in component potassium_current_n_gate (millisecond)');
LEGEND_CONSTANTS(:,61) = strpad('theta_n in component potassium_current_n_gate (millivolt)');
LEGEND_CONSTANTS(:,62) = strpad('sigma_n in component potassium_current_n_gate (millivolt)');
LEGEND_CONSTANTS(:,63) = strpad('g_NaP in component persistent_sodium_current (nanoS)');
LEGEND_ALGEBRAIC(:,57) = strpad('m_infinity in component persistent_sodium_current_m_gate (dimensionless)');
LEGEND_STATES(:,13) = strpad('h in component persistent_sodium_current_h_gate (dimensionless)');
LEGEND_CONSTANTS(:,64) = strpad('theta_m in component persistent_sodium_current_m_gate (millivolt)');
LEGEND_CONSTANTS(:,65) = strpad('sigma_m in component persistent_sodium_current_m_gate (millivolt)');
LEGEND_ALGEBRAIC(:,9) = strpad('h_infinity in component persistent_sodium_current_h_gate (dimensionless)');
LEGEND_ALGEBRAIC(:,33) = strpad('tau_h in component persistent_sodium_current_h_gate (millisecond)');
LEGEND_CONSTANTS(:,66) = strpad('tau_h_max in component persistent_sodium_current_h_gate (millisecond)');
LEGEND_CONSTANTS(:,67) = strpad('theta_h in component persistent_sodium_current_h_gate (millivolt)');
LEGEND_CONSTANTS(:,68) = strpad('sigma_h in component persistent_sodium_current_h_gate (millivolt)');
LEGEND_CONSTANTS(:,69) = strpad('g_L in component leakage_current (nanoS)');
LEGEND_CONSTANTS(:,70) = strpad('E_L in component leakage_current (millivolt)');
LEGEND_CONSTANTS(:,71) = strpad('E_syn_e in component tonic_current (millivolt)');
LEGEND_CONSTANTS(:,72) = strpad('g_tonic_e in component tonic_current (nanoS)');
LEGEND_ALGEBRAIC(:,10) = strpad('s_infinity in component synaptic_input (dimensionless)');
LEGEND_CONSTANTS(:,73) = strpad('kr in component synaptic_input (dimensionless)');
LEGEND_CONSTANTS(:,74) = strpad('tau_s in component synaptic_input (millisecond)');
LEGEND_CONSTANTS(:,75) = strpad('sigma_s in component synaptic_input (millivolt)');
LEGEND_CONSTANTS(:,76) = strpad('theta_s in component synaptic_input (millivolt)');
LEGEND_VOI = strpad('time in component environment (millisecond)');
LEGEND_STATES(:,14) = strpad('V in component membrane (millivolt)');
LEGEND_CONSTANTS(:,77) = strpad('C in component membrane (picoF)');
LEGEND_CONSTANTS(:,78) = strpad('i_app in component membrane (picoA)');
LEGEND_ALGEBRAIC(:,63) = strpad('i_NaP in component persistent_sodium_current (picoA)');
LEGEND_ALGEBRAIC(:,48) = strpad('i_Na in component fast_sodium_current (picoA)');
LEGEND_ALGEBRAIC(:,53) = strpad('i_K in component potassium_current (picoA)');
LEGEND_ALGEBRAIC(:,68) = strpad('i_L in component leakage_current (picoA)');
LEGEND_ALGEBRAIC(:,73) = strpad('i_tonic_e in component tonic_current (picoA)');
LEGEND_ALGEBRAIC(:,78) = strpad('i_syn_e in component synaptic_input (picoA)');
LEGEND_CONSTANTS(:,79) = strpad('E_Na in component fast_sodium_current (millivolt)');
LEGEND_CONSTANTS(:,80) = strpad('g_Na in component fast_sodium_current (nanoS)');
LEGEND_ALGEBRAIC(:,34) = strpad('m_infinity in component fast_sodium_current_m_gate (dimensionless)');
LEGEND_STATES(:,15) = strpad('n in component fast_sodium_current_n_gate (dimensionless)');
LEGEND_CONSTANTS(:,81) = strpad('theta_m in component fast_sodium_current_m_gate (millivolt)');
LEGEND_CONSTANTS(:,82) = strpad('sigma_m in component fast_sodium_current_m_gate (millivolt)');
LEGEND_ALGEBRAIC(:,12) = strpad('n_infinity in component fast_sodium_current_n_gate (dimensionless)');
LEGEND_ALGEBRAIC(:,35) = strpad('tau_n in component fast_sodium_current_n_gate (millisecond)');
LEGEND_CONSTANTS(:,83) = strpad('tau_n_max in component fast_sodium_current_n_gate (millisecond)');
LEGEND_CONSTANTS(:,84) = strpad('theta_n in component fast_sodium_current_n_gate (millivolt)');
LEGEND_CONSTANTS(:,85) = strpad('sigma_n in component fast_sodium_current_n_gate (millivolt)');
LEGEND_CONSTANTS(:,86) = strpad('g_K in component potassium_current (nanoS)');
LEGEND_CONSTANTS(:,87) = strpad('E_K in component potassium_current (millivolt)');
LEGEND_STATES(:,16) = strpad('n in component potassium_current_n_gate (dimensionless)');
LEGEND_ALGEBRAIC(:,13) = strpad('n_infinity in component potassium_current_n_gate (dimensionless)');
LEGEND_ALGEBRAIC(:,36) = strpad('tau_n in component potassium_current_n_gate (millisecond)');
LEGEND_CONSTANTS(:,88) = strpad('tau_n_max in component potassium_current_n_gate (millisecond)');
LEGEND_CONSTANTS(:,89) = strpad('theta_n in component potassium_current_n_gate (millivolt)');
LEGEND_CONSTANTS(:,90) = strpad('sigma_n in component potassium_current_n_gate (millivolt)');
LEGEND_CONSTANTS(:,91) = strpad('g_NaP in component persistent_sodium_current (nanoS)');
LEGEND_ALGEBRAIC(:,58) = strpad('m_infinity in component persistent_sodium_current_m_gate (dimensionless)');
LEGEND_STATES(:,17) = strpad('h in component persistent_sodium_current_h_gate (dimensionless)');
LEGEND_CONSTANTS(:,92) = strpad('theta_m in component persistent_sodium_current_m_gate (millivolt)');
LEGEND_CONSTANTS(:,93) = strpad('sigma_m in component persistent_sodium_current_m_gate (millivolt)');
LEGEND_ALGEBRAIC(:,14) = strpad('h_infinity in component persistent_sodium_current_h_gate (dimensionless)');
LEGEND_ALGEBRAIC(:,37) = strpad('tau_h in component persistent_sodium_current_h_gate (millisecond)');
LEGEND_CONSTANTS(:,94) = strpad('tau_h_max in component persistent_sodium_current_h_gate (millisecond)');
LEGEND_CONSTANTS(:,95) = strpad('theta_h in component persistent_sodium_current_h_gate (millivolt)');
LEGEND_CONSTANTS(:,96) = strpad('sigma_h in component persistent_sodium_current_h_gate (millivolt)');
LEGEND_CONSTANTS(:,97) = strpad('g_L in component leakage_current (nanoS)');
LEGEND_CONSTANTS(:,98) = strpad('E_L in component leakage_current (millivolt)');
LEGEND_CONSTANTS(:,99) = strpad('E_syn_e in component tonic_current (millivolt)');
LEGEND_CONSTANTS(:,100) = strpad('g_tonic_e in component tonic_current (nanoS)');
LEGEND_ALGEBRAIC(:,15) = strpad('s_infinity in component synaptic_input (dimensionless)');
LEGEND_CONSTANTS(:,101) = strpad('kr in component synaptic_input (dimensionless)');
LEGEND_CONSTANTS(:,102) = strpad('tau_s in component synaptic_input (millisecond)');
LEGEND_CONSTANTS(:,103) = strpad('sigma_s in component synaptic_input (millivolt)');
LEGEND_CONSTANTS(:,104) = strpad('theta_s in component synaptic_input (millivolt)');
LEGEND_VOI = strpad('time in component environment (millisecond)');
LEGEND_STATES(:,18) = strpad('V in component membrane (millivolt)');
LEGEND_CONSTANTS(:,105) = strpad('C in component membrane (picoF)');
LEGEND_CONSTANTS(:,106) = strpad('i_app in component membrane (picoA)');
LEGEND_ALGEBRAIC(:,64) = strpad('i_NaP in component persistent_sodium_current (picoA)');
LEGEND_ALGEBRAIC(:,49) = strpad('i_Na in component fast_sodium_current (picoA)');
LEGEND_ALGEBRAIC(:,54) = strpad('i_K in component potassium_current (picoA)');
LEGEND_ALGEBRAIC(:,69) = strpad('i_L in component leakage_current (picoA)');
LEGEND_ALGEBRAIC(:,74) = strpad('i_tonic_e in component tonic_current (picoA)');
LEGEND_ALGEBRAIC(:,79) = strpad('i_syn_e in component synaptic_input (picoA)');
LEGEND_CONSTANTS(:,107) = strpad('E_Na in component fast_sodium_current (millivolt)');
LEGEND_CONSTANTS(:,108) = strpad('g_Na in component fast_sodium_current (nanoS)');
LEGEND_ALGEBRAIC(:,38) = strpad('m_infinity in component fast_sodium_current_m_gate (dimensionless)');
LEGEND_STATES(:,19) = strpad('n in component fast_sodium_current_n_gate (dimensionless)');
LEGEND_CONSTANTS(:,109) = strpad('theta_m in component fast_sodium_current_m_gate (millivolt)');
LEGEND_CONSTANTS(:,110) = strpad('sigma_m in component fast_sodium_current_m_gate (millivolt)');
LEGEND_ALGEBRAIC(:,17) = strpad('n_infinity in component fast_sodium_current_n_gate (dimensionless)');
LEGEND_ALGEBRAIC(:,39) = strpad('tau_n in component fast_sodium_current_n_gate (millisecond)');
LEGEND_CONSTANTS(:,111) = strpad('tau_n_max in component fast_sodium_current_n_gate (millisecond)');
LEGEND_CONSTANTS(:,112) = strpad('theta_n in component fast_sodium_current_n_gate (millivolt)');
LEGEND_CONSTANTS(:,113) = strpad('sigma_n in component fast_sodium_current_n_gate (millivolt)');
LEGEND_CONSTANTS(:,114) = strpad('g_K in component potassium_current (nanoS)');
LEGEND_CONSTANTS(:,115) = strpad('E_K in component potassium_current (millivolt)');
LEGEND_STATES(:,20) = strpad('n in component potassium_current_n_gate (dimensionless)');
LEGEND_ALGEBRAIC(:,18) = strpad('n_infinity in component potassium_current_n_gate (dimensionless)');
LEGEND_ALGEBRAIC(:,40) = strpad('tau_n in component potassium_current_n_gate (millisecond)');
LEGEND_CONSTANTS(:,116) = strpad('tau_n_max in component potassium_current_n_gate (millisecond)');
LEGEND_CONSTANTS(:,117) = strpad('theta_n in component potassium_current_n_gate (millivolt)');
LEGEND_CONSTANTS(:,118) = strpad('sigma_n in component potassium_current_n_gate (millivolt)');
LEGEND_CONSTANTS(:,119) = strpad('g_NaP in component persistent_sodium_current (nanoS)');
LEGEND_ALGEBRAIC(:,59) = strpad('m_infinity in component persistent_sodium_current_m_gate (dimensionless)');
LEGEND_STATES(:,21) = strpad('h in component persistent_sodium_current_h_gate (dimensionless)');
LEGEND_CONSTANTS(:,120) = strpad('theta_m in component persistent_sodium_current_m_gate (millivolt)');
LEGEND_CONSTANTS(:,121) = strpad('sigma_m in component persistent_sodium_current_m_gate (millivolt)');
LEGEND_ALGEBRAIC(:,19) = strpad('h_infinity in component persistent_sodium_current_h_gate (dimensionless)');
LEGEND_ALGEBRAIC(:,41) = strpad('tau_h in component persistent_sodium_current_h_gate (millisecond)');
LEGEND_CONSTANTS(:,122) = strpad('tau_h_max in component persistent_sodium_current_h_gate (millisecond)');
LEGEND_CONSTANTS(:,123) = strpad('theta_h in component persistent_sodium_current_h_gate (millivolt)');
LEGEND_CONSTANTS(:,124) = strpad('sigma_h in component persistent_sodium_current_h_gate (millivolt)');
LEGEND_CONSTANTS(:,125) = strpad('g_L in component leakage_current (nanoS)');
LEGEND_CONSTANTS(:,126) = strpad('E_L in component leakage_current (millivolt)');
LEGEND_CONSTANTS(:,127) = strpad('E_syn_e in component tonic_current (millivolt)');
LEGEND_CONSTANTS(:,128) = strpad('g_tonic_e in component tonic_current (nanoS)');
LEGEND_ALGEBRAIC(:,20) = strpad('s_infinity in component synaptic_input (dimensionless)');
LEGEND_CONSTANTS(:,129) = strpad('kr in component synaptic_input (dimensionless)');
LEGEND_CONSTANTS(:,130) = strpad('tau_s in component synaptic_input (millisecond)');
LEGEND_CONSTANTS(:,131) = strpad('sigma_s in component synaptic_input (millivolt)');
LEGEND_CONSTANTS(:,132) = strpad('theta_s in component synaptic_input (millivolt)');
LEGEND_VOI = strpad('time in component environment (millisecond)');
LEGEND_STATES(:,22) = strpad('V in component membrane (millivolt)');
LEGEND_CONSTANTS(:,133) = strpad('C in component membrane (picoF)');
LEGEND_CONSTANTS(:,134) = strpad('i_app in component membrane (picoA)');
LEGEND_ALGEBRAIC(:,65) = strpad('i_NaP in component persistent_sodium_current (picoA)');
LEGEND_ALGEBRAIC(:,50) = strpad('i_Na in component fast_sodium_current (picoA)');
LEGEND_ALGEBRAIC(:,55) = strpad('i_K in component potassium_current (picoA)');
LEGEND_ALGEBRAIC(:,70) = strpad('i_L in component leakage_current (picoA)');
LEGEND_ALGEBRAIC(:,75) = strpad('i_tonic_e in component tonic_current (picoA)');
LEGEND_ALGEBRAIC(:,80) = strpad('i_syn_e in component synaptic_input (picoA)');
LEGEND_CONSTANTS(:,135) = strpad('E_Na in component fast_sodium_current (millivolt)');
LEGEND_CONSTANTS(:,136) = strpad('g_Na in component fast_sodium_current (nanoS)');
LEGEND_ALGEBRAIC(:,42) = strpad('m_infinity in component fast_sodium_current_m_gate (dimensionless)');
LEGEND_STATES(:,23) = strpad('n in component fast_sodium_current_n_gate (dimensionless)');
LEGEND_CONSTANTS(:,137) = strpad('theta_m in component fast_sodium_current_m_gate (millivolt)');
LEGEND_CONSTANTS(:,138) = strpad('sigma_m in component fast_sodium_current_m_gate (millivolt)');
LEGEND_ALGEBRAIC(:,22) = strpad('n_infinity in component fast_sodium_current_n_gate (dimensionless)');
LEGEND_ALGEBRAIC(:,43) = strpad('tau_n in component fast_sodium_current_n_gate (millisecond)');
LEGEND_CONSTANTS(:,139) = strpad('tau_n_max in component fast_sodium_current_n_gate (millisecond)');
LEGEND_CONSTANTS(:,140) = strpad('theta_n in component fast_sodium_current_n_gate (millivolt)');
LEGEND_CONSTANTS(:,141) = strpad('sigma_n in component fast_sodium_current_n_gate (millivolt)');
LEGEND_CONSTANTS(:,142) = strpad('g_K in component potassium_current (nanoS)');
LEGEND_CONSTANTS(:,143) = strpad('E_K in component potassium_current (millivolt)');
LEGEND_STATES(:,24) = strpad('n in component potassium_current_n_gate (dimensionless)');
LEGEND_ALGEBRAIC(:,23) = strpad('n_infinity in component potassium_current_n_gate (dimensionless)');
LEGEND_ALGEBRAIC(:,44) = strpad('tau_n in component potassium_current_n_gate (millisecond)');
LEGEND_CONSTANTS(:,144) = strpad('tau_n_max in component potassium_current_n_gate (millisecond)');
LEGEND_CONSTANTS(:,145) = strpad('theta_n in component potassium_current_n_gate (millivolt)');
LEGEND_CONSTANTS(:,146) = strpad('sigma_n in component potassium_current_n_gate (millivolt)');
LEGEND_CONSTANTS(:,147) = strpad('g_NaP in component persistent_sodium_current (nanoS)');
LEGEND_ALGEBRAIC(:,60) = strpad('m_infinity in component persistent_sodium_current_m_gate (dimensionless)');
LEGEND_STATES(:,25) = strpad('h in component persistent_sodium_current_h_gate (dimensionless)');
LEGEND_CONSTANTS(:,148) = strpad('theta_m in component persistent_sodium_current_m_gate (millivolt)');
LEGEND_CONSTANTS(:,149) = strpad('sigma_m in component persistent_sodium_current_m_gate (millivolt)');
LEGEND_ALGEBRAIC(:,24) = strpad('h_infinity in component persistent_sodium_current_h_gate (dimensionless)');
LEGEND_ALGEBRAIC(:,45) = strpad('tau_h in component persistent_sodium_current_h_gate (millisecond)');
LEGEND_CONSTANTS(:,150) = strpad('tau_h_max in component persistent_sodium_current_h_gate (millisecond)');
LEGEND_CONSTANTS(:,151) = strpad('theta_h in component persistent_sodium_current_h_gate (millivolt)');
LEGEND_CONSTANTS(:,152) = strpad('sigma_h in component persistent_sodium_current_h_gate (millivolt)');
LEGEND_CONSTANTS(:,153) = strpad('g_L in component leakage_current (nanoS)');
LEGEND_CONSTANTS(:,154) = strpad('E_L in component leakage_current (millivolt)');
LEGEND_CONSTANTS(:,155) = strpad('E_syn_e in component tonic_current (millivolt)');
LEGEND_CONSTANTS(:,156) = strpad('g_tonic_e in component tonic_current (nanoS)');
LEGEND_ALGEBRAIC(:,25) = strpad('s_infinity in component synaptic_input (dimensionless)');
LEGEND_CONSTANTS(:,157) = strpad('kr in component synaptic_input (dimensionless)');
LEGEND_CONSTANTS(:,158) = strpad('tau_s in component synaptic_input (millisecond)');
LEGEND_CONSTANTS(:,159) = strpad('sigma_s in component synaptic_input (millivolt)');
LEGEND_CONSTANTS(:,160) = strpad('theta_s in component synaptic_input (millivolt)');
LEGEND_RATES(:,6) = strpad('d/dt V in component membrane (millivolt)');
LEGEND_RATES(:,7) = strpad('d/dt n in component fast_sodium_current_n_gate (dimensionless)');
LEGEND_RATES(:,8) = strpad('d/dt n in component potassium_current_n_gate (dimensionless)');
LEGEND_RATES(:,9) = strpad('d/dt h in component persistent_sodium_current_h_gate (dimensionless)');
LEGEND_RATES(:,1) = strpad('d/dt s in component synaptic_input (dimensionless)');
LEGEND_RATES(:,10) = strpad('d/dt V in component membrane (millivolt)');
LEGEND_RATES(:,11) = strpad('d/dt n in component fast_sodium_current_n_gate (dimensionless)');
LEGEND_RATES(:,12) = strpad('d/dt n in component potassium_current_n_gate (dimensionless)');
LEGEND_RATES(:,13) = strpad('d/dt h in component persistent_sodium_current_h_gate (dimensionless)');
LEGEND_RATES(:,2) = strpad('d/dt s in component synaptic_input (dimensionless)');
LEGEND_RATES(:,14) = strpad('d/dt V in component membrane (millivolt)');
LEGEND_RATES(:,15) = strpad('d/dt n in component fast_sodium_current_n_gate (dimensionless)');
LEGEND_RATES(:,16) = strpad('d/dt n in component potassium_current_n_gate (dimensionless)');
LEGEND_RATES(:,17) = strpad('d/dt h in component persistent_sodium_current_h_gate (dimensionless)');
LEGEND_RATES(:,3) = strpad('d/dt s in component synaptic_input (dimensionless)');
LEGEND_RATES(:,18) = strpad('d/dt V in component membrane (millivolt)');
LEGEND_RATES(:,19) = strpad('d/dt n in component fast_sodium_current_n_gate (dimensionless)');
LEGEND_RATES(:,20) = strpad('d/dt n in component potassium_current_n_gate (dimensionless)');
LEGEND_RATES(:,21) = strpad('d/dt h in component persistent_sodium_current_h_gate (dimensionless)');
LEGEND_RATES(:,4) = strpad('d/dt s in component synaptic_input (dimensionless)');
LEGEND_RATES(:,22) = strpad('d/dt V in component membrane (millivolt)');
LEGEND_RATES(:,23) = strpad('d/dt n in component fast_sodium_current_n_gate (dimensionless)');
LEGEND_RATES(:,24) = strpad('d/dt n in component potassium_current_n_gate (dimensionless)');
LEGEND_RATES(:,25) = strpad('d/dt h in component persistent_sodium_current_h_gate (dimensionless)');
LEGEND_RATES(:,5) = strpad('d/dt s in component synaptic_input (dimensionless)');
LEGEND_STATES = LEGEND_STATES';
LEGEND_ALGEBRAIC = LEGEND_ALGEBRAIC';
LEGEND_RATES = LEGEND_RATES';
LEGEND_CONSTANTS = LEGEND_CONSTANTS';
end
function [STATES, CONSTANTS] = initConsts()
VOI = 0; CONSTANTS = []; STATES = []; ALGEBRAIC = [];
CONSTANTS(:,1) = 0.10;
CONSTANTS(:,2) = 0.10;
CONSTANTS(:,3) = 0.10;
CONSTANTS(:,4) = 0.10;
CONSTANTS(:,5) = 0.10;
CONSTANTS(:,6) = 0.10;
CONSTANTS(:,7) = 0.10;
CONSTANTS(:,8) = 0.10;
CONSTANTS(:,9) = 0.10;
CONSTANTS(:,10) = 0.10;
CONSTANTS(:,11) = 0.10;
CONSTANTS(:,12) = 0.10;
CONSTANTS(:,13) = 0.10;
CONSTANTS(:,14) = 0.10;
CONSTANTS(:,15) = 0.10;
CONSTANTS(:,16) = 0.10;
CONSTANTS(:,17) = 0.10;
CONSTANTS(:,18) = 0.10;
CONSTANTS(:,19) = 0.10;
CONSTANTS(:,20) = 0.10;
STATES(:,1) = 1;
STATES(:,2) = 1;
STATES(:,3) = 1;
STATES(:,4) = 1;
STATES(:,5) = 1;
STATES(:,6) = -50.0;
CONSTANTS(:,21) = 21.0;
CONSTANTS(:,22) = 0.0;
CONSTANTS(:,23) = 50.0;
CONSTANTS(:,24) = 28.0;
STATES(:,7) = 0.01;
CONSTANTS(:,25) = -34.0;
CONSTANTS(:,26) = -5.0;
CONSTANTS(:,27) = 10.0;
CONSTANTS(:,28) = -29.0;
CONSTANTS(:,29) = -4.0;
CONSTANTS(:,30) = 11.2;
CONSTANTS(:,31) = -85.0;
STATES(:,8) = 0.01;
CONSTANTS(:,32) = 10.0;
CONSTANTS(:,33) = -29.0;
CONSTANTS(:,34) = -4.0;
CONSTANTS(:,35) = 2.8;
STATES(:,9) = 0.46;
CONSTANTS(:,36) = -40.0;
CONSTANTS(:,37) = -6.0;
CONSTANTS(:,38) = 10000.0;
CONSTANTS(:,39) = -48.0;
CONSTANTS(:,40) = 6.0;
CONSTANTS(:,41) = 2.8;
CONSTANTS(:,42) = -57.5;
CONSTANTS(:,43) = 0.0;
CONSTANTS(:,44) = 0.0;
CONSTANTS(:,45) = 1.0;
CONSTANTS(:,46) = 5.0;
CONSTANTS(:,47) = -5.0;
CONSTANTS(:,48) = -10.0;
STATES(:,10) = -50.0;
CONSTANTS(:,49) = 21.0;
CONSTANTS(:,50) = 0.0;
CONSTANTS(:,51) = 50.0;
CONSTANTS(:,52) = 28.0;
STATES(:,11) = 0.01;
CONSTANTS(:,53) = -34.0;
CONSTANTS(:,54) = -5.0;
CONSTANTS(:,55) = 10.0;
CONSTANTS(:,56) = -29.0;
CONSTANTS(:,57) = -4.0;
CONSTANTS(:,58) = 11.2;
CONSTANTS(:,59) = -85.0;
STATES(:,12) = 0.01;
CONSTANTS(:,60) = 10.0;
CONSTANTS(:,61) = -29.0;
CONSTANTS(:,62) = -4.0;
CONSTANTS(:,63) = 2.8;
STATES(:,13) = 0.46;
CONSTANTS(:,64) = -40.0;
CONSTANTS(:,65) = -6.0;
CONSTANTS(:,66) = 10000.0;
CONSTANTS(:,67) = -48.0;
CONSTANTS(:,68) = 6.0;
CONSTANTS(:,69) = 2.8;
CONSTANTS(:,70) = -57.5;
CONSTANTS(:,71) = 0.0;
CONSTANTS(:,72) = 0.0;
CONSTANTS(:,73) = 1.0;
CONSTANTS(:,74) = 5.0;
CONSTANTS(:,75) = -5.0;
CONSTANTS(:,76) = -10.0;
STATES(:,14) = -50.0;
CONSTANTS(:,77) = 21.0;
CONSTANTS(:,78) = 0.0;
CONSTANTS(:,79) = 50.0;
CONSTANTS(:,80) = 28.0;
STATES(:,15) = 0.01;
CONSTANTS(:,81) = -34.0;
CONSTANTS(:,82) = -5.0;
CONSTANTS(:,83) = 10.0;
CONSTANTS(:,84) = -29.0;
CONSTANTS(:,85) = -4.0;
CONSTANTS(:,86) = 11.2;
CONSTANTS(:,87) = -85.0;
STATES(:,16) = 0.01;
CONSTANTS(:,88) = 10.0;
CONSTANTS(:,89) = -29.0;
CONSTANTS(:,90) = -4.0;
CONSTANTS(:,91) = 2.8;
STATES(:,17) = 0.46;
CONSTANTS(:,92) = -40.0;
CONSTANTS(:,93) = -6.0;
CONSTANTS(:,94) = 10000.0;
CONSTANTS(:,95) = -48.0;
CONSTANTS(:,96) = 6.0;
CONSTANTS(:,97) = 2.8;
CONSTANTS(:,98) = -57.5;
CONSTANTS(:,99) = 0.0;
CONSTANTS(:,100) = 0.0;
CONSTANTS(:,101) = 1.0;
CONSTANTS(:,102) = 5.0;
CONSTANTS(:,103) = -5.0;
CONSTANTS(:,104) = -10.0;
STATES(:,18) = -50.0;
CONSTANTS(:,105) = 21.0;
CONSTANTS(:,106) = 0.0;
CONSTANTS(:,107) = 50.0;
CONSTANTS(:,108) = 28.0;
STATES(:,19) = 0.01;
CONSTANTS(:,109) = -34.0;
CONSTANTS(:,110) = -5.0;
CONSTANTS(:,111) = 10.0;
CONSTANTS(:,112) = -29.0;
CONSTANTS(:,113) = -4.0;
CONSTANTS(:,114) = 11.2;
CONSTANTS(:,115) = -85.0;
STATES(:,20) = 0.01;
CONSTANTS(:,116) = 10.0;
CONSTANTS(:,117) = -29.0;
CONSTANTS(:,118) = -4.0;
CONSTANTS(:,119) = 2.8;
STATES(:,21) = 0.46;
CONSTANTS(:,120) = -40.0;
CONSTANTS(:,121) = -6.0;
CONSTANTS(:,122) = 10000.0;
CONSTANTS(:,123) = -48.0;
CONSTANTS(:,124) = 6.0;
CONSTANTS(:,125) = 2.8;
CONSTANTS(:,126) = -57.5;
CONSTANTS(:,127) = 0.0;
CONSTANTS(:,128) = 0.0;
CONSTANTS(:,129) = 1.0;
CONSTANTS(:,130) = 5.0;
CONSTANTS(:,131) = -5.0;
CONSTANTS(:,132) = -10.0;
STATES(:,22) = -50.0;
CONSTANTS(:,133) = 21.0;
CONSTANTS(:,134) = 0.0;
CONSTANTS(:,135) = 50.0;
CONSTANTS(:,136) = 28.0;
STATES(:,23) = 0.01;
CONSTANTS(:,137) = -34.0;
CONSTANTS(:,138) = -5.0;
CONSTANTS(:,139) = 10.0;
CONSTANTS(:,140) = -29.0;
CONSTANTS(:,141) = -4.0;
CONSTANTS(:,142) = 11.2;
CONSTANTS(:,143) = -85.0;
STATES(:,24) = 0.01;
CONSTANTS(:,144) = 10.0;
CONSTANTS(:,145) = -29.0;
CONSTANTS(:,146) = -4.0;
CONSTANTS(:,147) = 2.8;
STATES(:,25) = 0.46;
CONSTANTS(:,148) = -40.0;
CONSTANTS(:,149) = -6.0;
CONSTANTS(:,150) = 10000.0;
CONSTANTS(:,151) = -48.0;
CONSTANTS(:,152) = 6.0;
CONSTANTS(:,153) = 2.8;
CONSTANTS(:,154) = -57.5;
CONSTANTS(:,155) = 0.0;
CONSTANTS(:,156) = 0.0;
CONSTANTS(:,157) = 1.0;
CONSTANTS(:,158) = 5.0;
CONSTANTS(:,159) = -5.0;
CONSTANTS(:,160) = -10.0;
if (isempty(STATES)), warning('Initial values for states not set');, end
end
function [RATES, ALGEBRAIC] = computeRates(VOI, STATES, CONSTANTS)
global algebraicVariableCount;
statesSize = size(STATES);
statesColumnCount = statesSize(2);
if ( statesColumnCount == 1)
STATES = STATES';
ALGEBRAIC = zeros(1, algebraicVariableCount);
utilOnes = 1;
else
statesRowCount = statesSize(1);
ALGEBRAIC = zeros(statesRowCount, algebraicVariableCount);
RATES = zeros(statesRowCount, statesColumnCount);
utilOnes = ones(statesRowCount, 1);
end
ALGEBRAIC(:,5) = 1.00000./(1.00000+exp((STATES(:,6) - CONSTANTS(:,48))./CONSTANTS(:,47)));
RATES(:,1) = ( (1.00000 - STATES(:,1)).*ALGEBRAIC(:,5) - - ( CONSTANTS(:,45).*STATES(:,1)))./CONSTANTS(:,46);
ALGEBRAIC(:,10) = 1.00000./(1.00000+exp((STATES(:,10) - CONSTANTS(:,76))./CONSTANTS(:,75)));
RATES(:,2) = ( (1.00000 - STATES(:,2)).*ALGEBRAIC(:,10) - - ( CONSTANTS(:,73).*STATES(:,2)))./CONSTANTS(:,74);
ALGEBRAIC(:,15) = 1.00000./(1.00000+exp((STATES(:,14) - CONSTANTS(:,104))./CONSTANTS(:,103)));
RATES(:,3) = ( (1.00000 - STATES(:,3)).*ALGEBRAIC(:,15) - - ( CONSTANTS(:,101).*STATES(:,3)))./CONSTANTS(:,102);
ALGEBRAIC(:,20) = 1.00000./(1.00000+exp((STATES(:,18) - CONSTANTS(:,132))./CONSTANTS(:,131)));
RATES(:,4) = ( (1.00000 - STATES(:,4)).*ALGEBRAIC(:,20) - - ( CONSTANTS(:,129).*STATES(:,4)))./CONSTANTS(:,130);
ALGEBRAIC(:,25) = 1.00000./(1.00000+exp((STATES(:,22) - CONSTANTS(:,160))./CONSTANTS(:,159)));
RATES(:,5) = ( (1.00000 - STATES(:,5)).*ALGEBRAIC(:,25) - - ( CONSTANTS(:,157).*STATES(:,5)))./CONSTANTS(:,158);
ALGEBRAIC(:,2) = 1.00000./(1.00000+exp((STATES(:,6) - CONSTANTS(:,28))./CONSTANTS(:,29)));
ALGEBRAIC(:,27) = CONSTANTS(:,27)./cosh((STATES(:,6) - CONSTANTS(:,28))./( 2.00000.*CONSTANTS(:,29)));
RATES(:,7) = (ALGEBRAIC(:,2) - STATES(:,7))./ALGEBRAIC(:,27);
ALGEBRAIC(:,3) = 1.00000./(1.00000+exp((STATES(:,6) - CONSTANTS(:,33))./CONSTANTS(:,34)));
ALGEBRAIC(:,28) = CONSTANTS(:,32)./cosh((STATES(:,6) - CONSTANTS(:,33))./( 2.00000.*CONSTANTS(:,34)));
RATES(:,8) = (ALGEBRAIC(:,3) - STATES(:,8))./ALGEBRAIC(:,28);
ALGEBRAIC(:,4) = 1.00000./(1.00000+exp((STATES(:,6) - CONSTANTS(:,39))./CONSTANTS(:,40)));
ALGEBRAIC(:,29) = CONSTANTS(:,38)./cosh((STATES(:,6) - CONSTANTS(:,39))./( 2.00000.*CONSTANTS(:,40)));
RATES(:,9) = (ALGEBRAIC(:,4) - STATES(:,9))./ALGEBRAIC(:,29);
ALGEBRAIC(:,7) = 1.00000./(1.00000+exp((STATES(:,10) - CONSTANTS(:,56))./CONSTANTS(:,57)));
ALGEBRAIC(:,31) = CONSTANTS(:,55)./cosh((STATES(:,10) - CONSTANTS(:,56))./( 2.00000.*CONSTANTS(:,57)));
RATES(:,11) = (ALGEBRAIC(:,7) - STATES(:,11))./ALGEBRAIC(:,31);
ALGEBRAIC(:,8) = 1.00000./(1.00000+exp((STATES(:,10) - CONSTANTS(:,61))./CONSTANTS(:,62)));
ALGEBRAIC(:,32) = CONSTANTS(:,60)./cosh((STATES(:,10) - CONSTANTS(:,61))./( 2.00000.*CONSTANTS(:,62)));
RATES(:,12) = (ALGEBRAIC(:,8) - STATES(:,12))./ALGEBRAIC(:,32);
ALGEBRAIC(:,9) = 1.00000./(1.00000+exp((STATES(:,10) - CONSTANTS(:,67))./CONSTANTS(:,68)));
ALGEBRAIC(:,33) = CONSTANTS(:,66)./cosh((STATES(:,10) - CONSTANTS(:,67))./( 2.00000.*CONSTANTS(:,68)));
RATES(:,13) = (ALGEBRAIC(:,9) - STATES(:,13))./ALGEBRAIC(:,33);
ALGEBRAIC(:,12) = 1.00000./(1.00000+exp((STATES(:,14) - CONSTANTS(:,84))./CONSTANTS(:,85)));
ALGEBRAIC(:,35) = CONSTANTS(:,83)./cosh((STATES(:,14) - CONSTANTS(:,84))./( 2.00000.*CONSTANTS(:,85)));
RATES(:,15) = (ALGEBRAIC(:,12) - STATES(:,15))./ALGEBRAIC(:,35);
ALGEBRAIC(:,13) = 1.00000./(1.00000+exp((STATES(:,14) - CONSTANTS(:,89))./CONSTANTS(:,90)));
ALGEBRAIC(:,36) = CONSTANTS(:,88)./cosh((STATES(:,14) - CONSTANTS(:,89))./( 2.00000.*CONSTANTS(:,90)));
RATES(:,16) = (ALGEBRAIC(:,13) - STATES(:,16))./ALGEBRAIC(:,36);
ALGEBRAIC(:,14) = 1.00000./(1.00000+exp((STATES(:,14) - CONSTANTS(:,95))./CONSTANTS(:,96)));
ALGEBRAIC(:,37) = CONSTANTS(:,94)./cosh((STATES(:,14) - CONSTANTS(:,95))./( 2.00000.*CONSTANTS(:,96)));
RATES(:,17) = (ALGEBRAIC(:,14) - STATES(:,17))./ALGEBRAIC(:,37);
ALGEBRAIC(:,17) = 1.00000./(1.00000+exp((STATES(:,18) - CONSTANTS(:,112))./CONSTANTS(:,113)));
ALGEBRAIC(:,39) = CONSTANTS(:,111)./cosh((STATES(:,18) - CONSTANTS(:,112))./( 2.00000.*CONSTANTS(:,113)));
RATES(:,19) = (ALGEBRAIC(:,17) - STATES(:,19))./ALGEBRAIC(:,39);
ALGEBRAIC(:,18) = 1.00000./(1.00000+exp((STATES(:,18) - CONSTANTS(:,117))./CONSTANTS(:,118)));
ALGEBRAIC(:,40) = CONSTANTS(:,116)./cosh((STATES(:,18) - CONSTANTS(:,117))./( 2.00000.*CONSTANTS(:,118)));
RATES(:,20) = (ALGEBRAIC(:,18) - STATES(:,20))./ALGEBRAIC(:,40);
ALGEBRAIC(:,19) = 1.00000./(1.00000+exp((STATES(:,18) - CONSTANTS(:,123))./CONSTANTS(:,124)));
ALGEBRAIC(:,41) = CONSTANTS(:,122)./cosh((STATES(:,18) - CONSTANTS(:,123))./( 2.00000.*CONSTANTS(:,124)));
RATES(:,21) = (ALGEBRAIC(:,19) - STATES(:,21))./ALGEBRAIC(:,41);
ALGEBRAIC(:,22) = 1.00000./(1.00000+exp((STATES(:,22) - CONSTANTS(:,140))./CONSTANTS(:,141)));
ALGEBRAIC(:,43) = CONSTANTS(:,139)./cosh((STATES(:,22) - CONSTANTS(:,140))./( 2.00000.*CONSTANTS(:,141)));
RATES(:,23) = (ALGEBRAIC(:,22) - STATES(:,23))./ALGEBRAIC(:,43);
ALGEBRAIC(:,23) = 1.00000./(1.00000+exp((STATES(:,22) - CONSTANTS(:,145))./CONSTANTS(:,146)));
ALGEBRAIC(:,44) = CONSTANTS(:,144)./cosh((STATES(:,22) - CONSTANTS(:,145))./( 2.00000.*CONSTANTS(:,146)));
RATES(:,24) = (ALGEBRAIC(:,23) - STATES(:,24))./ALGEBRAIC(:,44);
ALGEBRAIC(:,24) = 1.00000./(1.00000+exp((STATES(:,22) - CONSTANTS(:,151))./CONSTANTS(:,152)));
ALGEBRAIC(:,45) = CONSTANTS(:,150)./cosh((STATES(:,22) - CONSTANTS(:,151))./( 2.00000.*CONSTANTS(:,152)));
RATES(:,25) = (ALGEBRAIC(:,24) - STATES(:,25))./ALGEBRAIC(:,45);
ALGEBRAIC(:,56) = 1.00000./(1.00000+exp((STATES(:,6) - CONSTANTS(:,36))./CONSTANTS(:,37)));
ALGEBRAIC(:,61) = CONSTANTS(:,35).*ALGEBRAIC(:,56).*STATES(:,9).*(STATES(:,6) - CONSTANTS(:,23));
ALGEBRAIC(:,26) = 1.00000./(1.00000+exp((STATES(:,6) - CONSTANTS(:,25))./CONSTANTS(:,26)));
ALGEBRAIC(:,46) = CONSTANTS(:,24).*power(ALGEBRAIC(:,26), 3.00000).*(1.00000 - STATES(:,7)).*(STATES(:,6) - CONSTANTS(:,23));
ALGEBRAIC(:,51) = CONSTANTS(:,30).*power(STATES(:,8), 4.00000).*(STATES(:,6) - CONSTANTS(:,31));
ALGEBRAIC(:,66) = CONSTANTS(:,41).*(STATES(:,6) - CONSTANTS(:,42));
ALGEBRAIC(:,71) = CONSTANTS(:,44).*(STATES(:,6) - CONSTANTS(:,43));
ALGEBRAIC(:,1) = CONSTANTS(:,1).*STATES(:,1)+ CONSTANTS(:,2).*STATES(:,1)+ CONSTANTS(:,3).*STATES(:,1)+ CONSTANTS(:,4).*STATES(:,1);
ALGEBRAIC(:,76) = ALGEBRAIC(:,1).*(STATES(:,6) - CONSTANTS(:,43));
RATES(:,6) = ( - (ALGEBRAIC(:,61)+ALGEBRAIC(:,46)+ALGEBRAIC(:,51)+ALGEBRAIC(:,66)+ALGEBRAIC(:,71)+ALGEBRAIC(:,76))+CONSTANTS(:,22))./CONSTANTS(:,21);
ALGEBRAIC(:,57) = 1.00000./(1.00000+exp((STATES(:,10) - CONSTANTS(:,64))./CONSTANTS(:,65)));
ALGEBRAIC(:,62) = CONSTANTS(:,63).*ALGEBRAIC(:,57).*STATES(:,13).*(STATES(:,10) - CONSTANTS(:,51));
ALGEBRAIC(:,30) = 1.00000./(1.00000+exp((STATES(:,10) - CONSTANTS(:,53))./CONSTANTS(:,54)));
ALGEBRAIC(:,47) = CONSTANTS(:,52).*power(ALGEBRAIC(:,30), 3.00000).*(1.00000 - STATES(:,11)).*(STATES(:,10) - CONSTANTS(:,51));
ALGEBRAIC(:,52) = CONSTANTS(:,58).*power(STATES(:,12), 4.00000).*(STATES(:,10) - CONSTANTS(:,59));
ALGEBRAIC(:,67) = CONSTANTS(:,69).*(STATES(:,10) - CONSTANTS(:,70));
ALGEBRAIC(:,72) = CONSTANTS(:,72).*(STATES(:,10) - CONSTANTS(:,71));
ALGEBRAIC(:,6) = CONSTANTS(:,5).*STATES(:,2)+ CONSTANTS(:,6).*STATES(:,2)+ CONSTANTS(:,7).*STATES(:,2)+ CONSTANTS(:,8).*STATES(:,2);
ALGEBRAIC(:,77) = ALGEBRAIC(:,6).*(STATES(:,10) - CONSTANTS(:,71));
RATES(:,10) = ( - (ALGEBRAIC(:,62)+ALGEBRAIC(:,47)+ALGEBRAIC(:,52)+ALGEBRAIC(:,67)+ALGEBRAIC(:,72)+ALGEBRAIC(:,77))+CONSTANTS(:,50))./CONSTANTS(:,49);
ALGEBRAIC(:,58) = 1.00000./(1.00000+exp((STATES(:,14) - CONSTANTS(:,92))./CONSTANTS(:,93)));
ALGEBRAIC(:,63) = CONSTANTS(:,91).*ALGEBRAIC(:,58).*STATES(:,17).*(STATES(:,14) - CONSTANTS(:,79));
ALGEBRAIC(:,34) = 1.00000./(1.00000+exp((STATES(:,14) - CONSTANTS(:,81))./CONSTANTS(:,82)));
ALGEBRAIC(:,48) = CONSTANTS(:,80).*power(ALGEBRAIC(:,34), 3.00000).*(1.00000 - STATES(:,15)).*(STATES(:,14) - CONSTANTS(:,79));
ALGEBRAIC(:,53) = CONSTANTS(:,86).*power(STATES(:,16), 4.00000).*(STATES(:,14) - CONSTANTS(:,87));
ALGEBRAIC(:,68) = CONSTANTS(:,97).*(STATES(:,14) - CONSTANTS(:,98));
ALGEBRAIC(:,73) = CONSTANTS(:,100).*(STATES(:,14) - CONSTANTS(:,99));
ALGEBRAIC(:,11) = CONSTANTS(:,9).*STATES(:,3)+ CONSTANTS(:,10).*STATES(:,3)+ CONSTANTS(:,11).*STATES(:,3)+ CONSTANTS(:,12).*STATES(:,3);
ALGEBRAIC(:,78) = ALGEBRAIC(:,11).*(STATES(:,14) - CONSTANTS(:,99));
RATES(:,14) = ( - (ALGEBRAIC(:,63)+ALGEBRAIC(:,48)+ALGEBRAIC(:,53)+ALGEBRAIC(:,68)+ALGEBRAIC(:,73)+ALGEBRAIC(:,78))+CONSTANTS(:,78))./CONSTANTS(:,77);
ALGEBRAIC(:,59) = 1.00000./(1.00000+exp((STATES(:,18) - CONSTANTS(:,120))./CONSTANTS(:,121)));
ALGEBRAIC(:,64) = CONSTANTS(:,119).*ALGEBRAIC(:,59).*STATES(:,21).*(STATES(:,18) - CONSTANTS(:,107));
ALGEBRAIC(:,38) = 1.00000./(1.00000+exp((STATES(:,18) - CONSTANTS(:,109))./CONSTANTS(:,110)));
ALGEBRAIC(:,49) = CONSTANTS(:,108).*power(ALGEBRAIC(:,38), 3.00000).*(1.00000 - STATES(:,19)).*(STATES(:,18) - CONSTANTS(:,107));
ALGEBRAIC(:,54) = CONSTANTS(:,114).*power(STATES(:,20), 4.00000).*(STATES(:,18) - CONSTANTS(:,115));
ALGEBRAIC(:,69) = CONSTANTS(:,125).*(STATES(:,18) - CONSTANTS(:,126));
ALGEBRAIC(:,74) = CONSTANTS(:,128).*(STATES(:,18) - CONSTANTS(:,127));
ALGEBRAIC(:,16) = CONSTANTS(:,13).*STATES(:,4)+ CONSTANTS(:,14).*STATES(:,4)+ CONSTANTS(:,15).*STATES(:,4)+ CONSTANTS(:,16).*STATES(:,4);
ALGEBRAIC(:,79) = ALGEBRAIC(:,16).*(STATES(:,18) - CONSTANTS(:,127));
RATES(:,18) = ( - (ALGEBRAIC(:,64)+ALGEBRAIC(:,49)+ALGEBRAIC(:,54)+ALGEBRAIC(:,69)+ALGEBRAIC(:,74)+ALGEBRAIC(:,79))+CONSTANTS(:,106))./CONSTANTS(:,105);
ALGEBRAIC(:,60) = 1.00000./(1.00000+exp((STATES(:,22) - CONSTANTS(:,148))./CONSTANTS(:,149)));
ALGEBRAIC(:,65) = CONSTANTS(:,147).*ALGEBRAIC(:,60).*STATES(:,25).*(STATES(:,22) - CONSTANTS(:,135));
ALGEBRAIC(:,42) = 1.00000./(1.00000+exp((STATES(:,22) - CONSTANTS(:,137))./CONSTANTS(:,138)));
ALGEBRAIC(:,50) = CONSTANTS(:,136).*power(ALGEBRAIC(:,42), 3.00000).*(1.00000 - STATES(:,23)).*(STATES(:,22) - CONSTANTS(:,135));
ALGEBRAIC(:,55) = CONSTANTS(:,142).*power(STATES(:,24), 4.00000).*(STATES(:,22) - CONSTANTS(:,143));
ALGEBRAIC(:,70) = CONSTANTS(:,153).*(STATES(:,22) - CONSTANTS(:,154));
ALGEBRAIC(:,75) = CONSTANTS(:,156).*(STATES(:,22) - CONSTANTS(:,155));
ALGEBRAIC(:,21) = CONSTANTS(:,17).*STATES(:,5)+ CONSTANTS(:,18).*STATES(:,5)+ CONSTANTS(:,19).*STATES(:,5)+ CONSTANTS(:,20).*STATES(:,5);
ALGEBRAIC(:,80) = ALGEBRAIC(:,21).*(STATES(:,22) - CONSTANTS(:,155));
RATES(:,22) = ( - (ALGEBRAIC(:,65)+ALGEBRAIC(:,50)+ALGEBRAIC(:,55)+ALGEBRAIC(:,70)+ALGEBRAIC(:,75)+ALGEBRAIC(:,80))+CONSTANTS(:,134))./CONSTANTS(:,133);
RATES = RATES';
end
% Calculate algebraic variables
function ALGEBRAIC = computeAlgebraic(ALGEBRAIC, CONSTANTS, STATES, VOI)
statesSize = size(STATES);
statesColumnCount = statesSize(2);
if ( statesColumnCount == 1)
STATES = STATES';
utilOnes = 1;
else
statesRowCount = statesSize(1);
utilOnes = ones(statesRowCount, 1);
end
ALGEBRAIC(:,5) = 1.00000./(1.00000+exp((STATES(:,6) - CONSTANTS(:,48))./CONSTANTS(:,47)));
ALGEBRAIC(:,10) = 1.00000./(1.00000+exp((STATES(:,10) - CONSTANTS(:,76))./CONSTANTS(:,75)));
ALGEBRAIC(:,15) = 1.00000./(1.00000+exp((STATES(:,14) - CONSTANTS(:,104))./CONSTANTS(:,103)));
ALGEBRAIC(:,20) = 1.00000./(1.00000+exp((STATES(:,18) - CONSTANTS(:,132))./CONSTANTS(:,131)));
ALGEBRAIC(:,25) = 1.00000./(1.00000+exp((STATES(:,22) - CONSTANTS(:,160))./CONSTANTS(:,159)));
ALGEBRAIC(:,2) = 1.00000./(1.00000+exp((STATES(:,6) - CONSTANTS(:,28))./CONSTANTS(:,29)));
ALGEBRAIC(:,27) = CONSTANTS(:,27)./cosh((STATES(:,6) - CONSTANTS(:,28))./( 2.00000.*CONSTANTS(:,29)));
ALGEBRAIC(:,3) = 1.00000./(1.00000+exp((STATES(:,6) - CONSTANTS(:,33))./CONSTANTS(:,34)));
ALGEBRAIC(:,28) = CONSTANTS(:,32)./cosh((STATES(:,6) - CONSTANTS(:,33))./( 2.00000.*CONSTANTS(:,34)));
ALGEBRAIC(:,4) = 1.00000./(1.00000+exp((STATES(:,6) - CONSTANTS(:,39))./CONSTANTS(:,40)));
ALGEBRAIC(:,29) = CONSTANTS(:,38)./cosh((STATES(:,6) - CONSTANTS(:,39))./( 2.00000.*CONSTANTS(:,40)));
ALGEBRAIC(:,7) = 1.00000./(1.00000+exp((STATES(:,10) - CONSTANTS(:,56))./CONSTANTS(:,57)));
ALGEBRAIC(:,31) = CONSTANTS(:,55)./cosh((STATES(:,10) - CONSTANTS(:,56))./( 2.00000.*CONSTANTS(:,57)));
ALGEBRAIC(:,8) = 1.00000./(1.00000+exp((STATES(:,10) - CONSTANTS(:,61))./CONSTANTS(:,62)));
ALGEBRAIC(:,32) = CONSTANTS(:,60)./cosh((STATES(:,10) - CONSTANTS(:,61))./( 2.00000.*CONSTANTS(:,62)));
ALGEBRAIC(:,9) = 1.00000./(1.00000+exp((STATES(:,10) - CONSTANTS(:,67))./CONSTANTS(:,68)));
ALGEBRAIC(:,33) = CONSTANTS(:,66)./cosh((STATES(:,10) - CONSTANTS(:,67))./( 2.00000.*CONSTANTS(:,68)));
ALGEBRAIC(:,12) = 1.00000./(1.00000+exp((STATES(:,14) - CONSTANTS(:,84))./CONSTANTS(:,85)));
ALGEBRAIC(:,35) = CONSTANTS(:,83)./cosh((STATES(:,14) - CONSTANTS(:,84))./( 2.00000.*CONSTANTS(:,85)));
ALGEBRAIC(:,13) = 1.00000./(1.00000+exp((STATES(:,14) - CONSTANTS(:,89))./CONSTANTS(:,90)));
ALGEBRAIC(:,36) = CONSTANTS(:,88)./cosh((STATES(:,14) - CONSTANTS(:,89))./( 2.00000.*CONSTANTS(:,90)));
ALGEBRAIC(:,14) = 1.00000./(1.00000+exp((STATES(:,14) - CONSTANTS(:,95))./CONSTANTS(:,96)));
ALGEBRAIC(:,37) = CONSTANTS(:,94)./cosh((STATES(:,14) - CONSTANTS(:,95))./( 2.00000.*CONSTANTS(:,96)));
ALGEBRAIC(:,17) = 1.00000./(1.00000+exp((STATES(:,18) - CONSTANTS(:,112))./CONSTANTS(:,113)));
ALGEBRAIC(:,39) = CONSTANTS(:,111)./cosh((STATES(:,18) - CONSTANTS(:,112))./( 2.00000.*CONSTANTS(:,113)));
ALGEBRAIC(:,18) = 1.00000./(1.00000+exp((STATES(:,18) - CONSTANTS(:,117))./CONSTANTS(:,118)));
ALGEBRAIC(:,40) = CONSTANTS(:,116)./cosh((STATES(:,18) - CONSTANTS(:,117))./( 2.00000.*CONSTANTS(:,118)));
ALGEBRAIC(:,19) = 1.00000./(1.00000+exp((STATES(:,18) - CONSTANTS(:,123))./CONSTANTS(:,124)));
ALGEBRAIC(:,41) = CONSTANTS(:,122)./cosh((STATES(:,18) - CONSTANTS(:,123))./( 2.00000.*CONSTANTS(:,124)));
ALGEBRAIC(:,22) = 1.00000./(1.00000+exp((STATES(:,22) - CONSTANTS(:,140))./CONSTANTS(:,141)));
ALGEBRAIC(:,43) = CONSTANTS(:,139)./cosh((STATES(:,22) - CONSTANTS(:,140))./( 2.00000.*CONSTANTS(:,141)));
ALGEBRAIC(:,23) = 1.00000./(1.00000+exp((STATES(:,22) - CONSTANTS(:,145))./CONSTANTS(:,146)));
ALGEBRAIC(:,44) = CONSTANTS(:,144)./cosh((STATES(:,22) - CONSTANTS(:,145))./( 2.00000.*CONSTANTS(:,146)));
ALGEBRAIC(:,24) = 1.00000./(1.00000+exp((STATES(:,22) - CONSTANTS(:,151))./CONSTANTS(:,152)));
ALGEBRAIC(:,45) = CONSTANTS(:,150)./cosh((STATES(:,22) - CONSTANTS(:,151))./( 2.00000.*CONSTANTS(:,152)));
ALGEBRAIC(:,56) = 1.00000./(1.00000+exp((STATES(:,6) - CONSTANTS(:,36))./CONSTANTS(:,37)));
ALGEBRAIC(:,61) = CONSTANTS(:,35).*ALGEBRAIC(:,56).*STATES(:,9).*(STATES(:,6) - CONSTANTS(:,23));
ALGEBRAIC(:,26) = 1.00000./(1.00000+exp((STATES(:,6) - CONSTANTS(:,25))./CONSTANTS(:,26)));
ALGEBRAIC(:,46) = CONSTANTS(:,24).*power(ALGEBRAIC(:,26), 3.00000).*(1.00000 - STATES(:,7)).*(STATES(:,6) - CONSTANTS(:,23));
ALGEBRAIC(:,51) = CONSTANTS(:,30).*power(STATES(:,8), 4.00000).*(STATES(:,6) - CONSTANTS(:,31));
ALGEBRAIC(:,66) = CONSTANTS(:,41).*(STATES(:,6) - CONSTANTS(:,42));
ALGEBRAIC(:,71) = CONSTANTS(:,44).*(STATES(:,6) - CONSTANTS(:,43));
ALGEBRAIC(:,1) = CONSTANTS(:,1).*STATES(:,1)+ CONSTANTS(:,2).*STATES(:,1)+ CONSTANTS(:,3).*STATES(:,1)+ CONSTANTS(:,4).*STATES(:,1);
ALGEBRAIC(:,76) = ALGEBRAIC(:,1).*(STATES(:,6) - CONSTANTS(:,43));
ALGEBRAIC(:,57) = 1.00000./(1.00000+exp((STATES(:,10) - CONSTANTS(:,64))./CONSTANTS(:,65)));
ALGEBRAIC(:,62) = CONSTANTS(:,63).*ALGEBRAIC(:,57).*STATES(:,13).*(STATES(:,10) - CONSTANTS(:,51));
ALGEBRAIC(:,30) = 1.00000./(1.00000+exp((STATES(:,10) - CONSTANTS(:,53))./CONSTANTS(:,54)));
ALGEBRAIC(:,47) = CONSTANTS(:,52).*power(ALGEBRAIC(:,30), 3.00000).*(1.00000 - STATES(:,11)).*(STATES(:,10) - CONSTANTS(:,51));
ALGEBRAIC(:,52) = CONSTANTS(:,58).*power(STATES(:,12), 4.00000).*(STATES(:,10) - CONSTANTS(:,59));
ALGEBRAIC(:,67) = CONSTANTS(:,69).*(STATES(:,10) - CONSTANTS(:,70));
ALGEBRAIC(:,72) = CONSTANTS(:,72).*(STATES(:,10) - CONSTANTS(:,71));
ALGEBRAIC(:,6) = CONSTANTS(:,5).*STATES(:,2)+ CONSTANTS(:,6).*STATES(:,2)+ CONSTANTS(:,7).*STATES(:,2)+ CONSTANTS(:,8).*STATES(:,2);
ALGEBRAIC(:,77) = ALGEBRAIC(:,6).*(STATES(:,10) - CONSTANTS(:,71));
ALGEBRAIC(:,58) = 1.00000./(1.00000+exp((STATES(:,14) - CONSTANTS(:,92))./CONSTANTS(:,93)));
ALGEBRAIC(:,63) = CONSTANTS(:,91).*ALGEBRAIC(:,58).*STATES(:,17).*(STATES(:,14) - CONSTANTS(:,79));
ALGEBRAIC(:,34) = 1.00000./(1.00000+exp((STATES(:,14) - CONSTANTS(:,81))./CONSTANTS(:,82)));
ALGEBRAIC(:,48) = CONSTANTS(:,80).*power(ALGEBRAIC(:,34), 3.00000).*(1.00000 - STATES(:,15)).*(STATES(:,14) - CONSTANTS(:,79));
ALGEBRAIC(:,53) = CONSTANTS(:,86).*power(STATES(:,16), 4.00000).*(STATES(:,14) - CONSTANTS(:,87));
ALGEBRAIC(:,68) = CONSTANTS(:,97).*(STATES(:,14) - CONSTANTS(:,98));
ALGEBRAIC(:,73) = CONSTANTS(:,100).*(STATES(:,14) - CONSTANTS(:,99));
ALGEBRAIC(:,11) = CONSTANTS(:,9).*STATES(:,3)+ CONSTANTS(:,10).*STATES(:,3)+ CONSTANTS(:,11).*STATES(:,3)+ CONSTANTS(:,12).*STATES(:,3);
ALGEBRAIC(:,78) = ALGEBRAIC(:,11).*(STATES(:,14) - CONSTANTS(:,99));
ALGEBRAIC(:,59) = 1.00000./(1.00000+exp((STATES(:,18) - CONSTANTS(:,120))./CONSTANTS(:,121)));
ALGEBRAIC(:,64) = CONSTANTS(:,119).*ALGEBRAIC(:,59).*STATES(:,21).*(STATES(:,18) - CONSTANTS(:,107));
ALGEBRAIC(:,38) = 1.00000./(1.00000+exp((STATES(:,18) - CONSTANTS(:,109))./CONSTANTS(:,110)));
ALGEBRAIC(:,49) = CONSTANTS(:,108).*power(ALGEBRAIC(:,38), 3.00000).*(1.00000 - STATES(:,19)).*(STATES(:,18) - CONSTANTS(:,107));
ALGEBRAIC(:,54) = CONSTANTS(:,114).*power(STATES(:,20), 4.00000).*(STATES(:,18) - CONSTANTS(:,115));
ALGEBRAIC(:,69) = CONSTANTS(:,125).*(STATES(:,18) - CONSTANTS(:,126));
ALGEBRAIC(:,74) = CONSTANTS(:,128).*(STATES(:,18) - CONSTANTS(:,127));
ALGEBRAIC(:,16) = CONSTANTS(:,13).*STATES(:,4)+ CONSTANTS(:,14).*STATES(:,4)+ CONSTANTS(:,15).*STATES(:,4)+ CONSTANTS(:,16).*STATES(:,4);
ALGEBRAIC(:,79) = ALGEBRAIC(:,16).*(STATES(:,18) - CONSTANTS(:,127));
ALGEBRAIC(:,60) = 1.00000./(1.00000+exp((STATES(:,22) - CONSTANTS(:,148))./CONSTANTS(:,149)));
ALGEBRAIC(:,65) = CONSTANTS(:,147).*ALGEBRAIC(:,60).*STATES(:,25).*(STATES(:,22) - CONSTANTS(:,135));
ALGEBRAIC(:,42) = 1.00000./(1.00000+exp((STATES(:,22) - CONSTANTS(:,137))./CONSTANTS(:,138)));
ALGEBRAIC(:,50) = CONSTANTS(:,136).*power(ALGEBRAIC(:,42), 3.00000).*(1.00000 - STATES(:,23)).*(STATES(:,22) - CONSTANTS(:,135));
ALGEBRAIC(:,55) = CONSTANTS(:,142).*power(STATES(:,24), 4.00000).*(STATES(:,22) - CONSTANTS(:,143));
ALGEBRAIC(:,70) = CONSTANTS(:,153).*(STATES(:,22) - CONSTANTS(:,154));
ALGEBRAIC(:,75) = CONSTANTS(:,156).*(STATES(:,22) - CONSTANTS(:,155));
ALGEBRAIC(:,21) = CONSTANTS(:,17).*STATES(:,5)+ CONSTANTS(:,18).*STATES(:,5)+ CONSTANTS(:,19).*STATES(:,5)+ CONSTANTS(:,20).*STATES(:,5);
ALGEBRAIC(:,80) = ALGEBRAIC(:,21).*(STATES(:,22) - CONSTANTS(:,155));
end
% Pad out or shorten strings to a set length
function strout = strpad(strin)
req_length = 160;
insize = size(strin,2);
if insize > req_length
strout = strin(1:req_length);
else
strout = [strin, blanks(req_length - insize)];
end
end