Andre's Hodgkin & Huxley with CellML

This workspace holds an encoding of the Hodgkin & Huxley (1952) model, designed as useful example to use for explaining the basics of using CellML. A more comprehensive encoding of the Hodgkin & Huxley model is also available.

Direct links to some of the useful documents in this workspace:

• The complete Hodgkin & Huxley mathematical model: components/stimulated.xml; the base model to be instantiated into specific simulation experiments which set the stimulus protocol.
• The complete set of default parameter values and initial conditions from the HH paper: components/default-variable-values.xml
• The HH model configured and parameterised with an applied periodic stimulus current: experiments/periodic-stimulus.xml
• A SED-ML description of a simulation experiment for the periodic stimulus experiment: sed-ml/periodic-stimulus.xml; can be used in the SED-ML Web Tools to produce the results shown in the tutorial.