Model Mathematics

Component: environment

Component: C_6PG

dd time C_6PG = rG6PDH - r6PGDH + mu C_6PG

Component: C_Ru5P

dd time C_Ru5P = r6PGDH - rR5PI + rRu5PE + mu C_Ru5P

Component: C_R5P

dd time C_R5P = rR5PI - rTKL1 + rRPPK + mu C_R5P

Component: C_X5P

dd time C_X5P = rRu5PE - rTKL1 + rTKL2 + mu C_X5P

Component: C_S7P

dd time C_S7P = rTKL1 - rTAL + mu C_S7P

Component: C_E4P

dd time C_E4P = rTAL - rTKL2 + rPKDA + mu C_E4P

Component: C_G6P

dd time C_G6P = dC_G6P_dt dC_G6P_dt =44.148+1time+0.45time2+44.1time48+1time+0.45time248+1time+0.45time21+0.90time

Component: C_NADP

dd time C_NADP =-1.489.17+16.1time+0.48time2+1.48time9.17+16.1time+0.48time29.17+16.1time+0.48time216.1+0.96time

Component: C_NADPH

dd time C_NADPH =0.51625.39+0.37time+0.5time2-0.516time25.39+0.37time+0.5time225.39+0.37time+0.5time20.37+1time

Component: C_MgATP

dd time C_MgATP =29.8329.77+13.42time+0.05time2-29.83time29.77+13.42time+0.05time229.77+13.42time+0.05time213.42+0.1time

Component: rG6PDH

rG6PDH = rmax_G6PDH C_NADP C_NADP + K_NADP_1 I_NADPH_1 I_MgATP_1 I_NADPH_1 =1.0+ C_NADPH Ki_NADPH_1 I_MgATP_1 =1.0+ C_MgATP Ki_MgATP_1

Component: r6PGDH

r6PGDH = rmax_6PGDH C_NADP C_NADP + K_NADP_2 I_NADPH_2 I_MgATP_2 I_NADPH_2 =1.0+ C_NADPH Ki_NADPH_2 I_MgATP_2 =1.0+ C_MgATP Ki_MgATP_2

Component: rR5PI

rR5PI =1 rmax_R5PI C_Ru5P

Component: rRu5PE

rRu5PE =1 rmax_Ru5PE C_Ru5P

Component: rTKL1

rTKL1 =1 rmax_TKL1 C_X5P C_R5P

Component: rTAL

rTAL =1 rmax_TAL C_GAP C_S7P

Component: rTKL2

rTKL2 =1 rmax_TKL2 C_E4P C_X5P

Component: rPKDA

rPKDA =1 rmax_PKDA C_E4P C_E4P + K_PKDA

Component: rRPPK

rRPPK =1 rmax_RPPK C_R5P C_R5P + K_RPPK

Component: rHK

rHK = qs

Component: rPGI

rPGI = qs - rG6PDH + mu C_G6P + dC_G6P_dt

Component: model_constants

qs = 0.131 if time < 0.0 0.546 otherwise