/*
   There are a total of 1 entries in the algebraic variable array.
   There are a total of 3 entries in each of the rate and state variable arrays.
   There are a total of 10 entries in the constant variable array.
 */
/*
 * VOI is time in component environment (hour).
 * STATES[0] is M in component M (nanomolar).
 * CONSTANTS[0] is vs in component M (flux).
 * CONSTANTS[1] is vm in component M (flux).
 * CONSTANTS[2] is Km in component M (nanomolar).
 * CONSTANTS[3] is KI in component M (nanomolar).
 * CONSTANTS[4] is n in component M (dimensionless).
 * STATES[1] is FN in component FN (nanomolar).
 * STATES[2] is FC in component FC (nanomolar).
 * ALGEBRAIC[0] is Ft in component FC (nanomolar).
 * CONSTANTS[5] is ks in component FC (first_order_rate_constant).
 * CONSTANTS[6] is vd in component FC (flux).
 * CONSTANTS[7] is Kd in component FC (nanomolar).
 * CONSTANTS[8] is k1 in component parameters (first_order_rate_constant).
 * CONSTANTS[9] is k2 in component parameters (first_order_rate_constant).
 * RATES[0] is d/dt M in component M (nanomolar).
 * RATES[2] is d/dt FC in component FC (nanomolar).
 * RATES[1] is d/dt FN in component FN (nanomolar).
 */
void
initConsts(double* CONSTANTS, double* RATES, double *STATES)
{
STATES[0] = 0.1;
CONSTANTS[0] = 1.6;
CONSTANTS[1] = 0.505;
CONSTANTS[2] = 0.5;
CONSTANTS[3] = 1.0;
CONSTANTS[4] = 4.0;
STATES[1] = 0.1;
STATES[2] = 0.1;
CONSTANTS[5] = 0.5;
CONSTANTS[6] = 1.4;
CONSTANTS[7] = 0.13;
CONSTANTS[8] = 0.5;
CONSTANTS[9] = 0.6;
}
void
computeRates(double VOI, double* CONSTANTS, double* RATES, double* STATES, double* ALGEBRAIC)
{
RATES[0] =  CONSTANTS[0]*(pow(CONSTANTS[3], CONSTANTS[4])/(pow(CONSTANTS[3], CONSTANTS[4])+pow(STATES[1], CONSTANTS[4]))) -  CONSTANTS[1]*(STATES[0]/(CONSTANTS[2]+STATES[0]));
RATES[2] = ( CONSTANTS[5]*STATES[0]+ CONSTANTS[9]*STATES[1]) - ( CONSTANTS[6]*(STATES[2]/(CONSTANTS[7]+STATES[2]))+ CONSTANTS[8]*STATES[2]);
RATES[1] =  CONSTANTS[8]*STATES[2] -  CONSTANTS[9]*STATES[1];
}
void
computeVariables(double VOI, double* CONSTANTS, double* RATES, double* STATES, double* ALGEBRAIC)
{
ALGEBRAIC[0] = STATES[2]+STATES[1];
}