transcription initiation complex formed by Dz and Rz
Qz1
Catherine
May
Lloyd
zinc
Zn
2
0.01
10000
ZnZutA-DNA complex
Qz2
keyword
Auckland Bioengineering Institute
The University of Auckland
Qz3
transcription initiation complex formed by Qz2 and Rz
changed cmeta id to be version aspecific, updated curation status,
removed reference link from documentation
Px
apo-ZntR
RNA polymerase for znuC transcription
Rw
RNA polymerase for znuC transcription
Rw
Jaap
Kaandorp
A
active ZntR
Px1
ZnZntR
This CellML model runs in both PCEnv and COR to recreate the published results. The units have been checked and they are consistent. In this particular version of the model the zinc-buffering effects of TPEN are NOT considered.
James
Lawson
Richard
Model does not include the zinc-buffering effects of TPEN
transcription initiation complex of ZnuC
Qw1
Zn4Zur
Py1
active Zur
Zur dimer containing two zinc ions per monomer
transcription initiation complex formed by Dz and Rz
Qz1
Model includes the zinc-buffering effects of TPEN
The University of Auckland, Auckland Bioengineering Institute
Mw
mRNA of ZnuC
BMC Systems Biology
Cui
Jiangjun
A
Jaap
Kaandorp
apo-ZntA-DNA complex
Qz4
May
Catherine
Lloyd
Cui
Jiangjun
M
Catherine
Lloyd
2
Simulating In Vitro Transcriptional Response of Zn2+ Homeostasis System in Escherichia coli
18950480
89
active ZntR
Px1
ZnZntR
Py
Zur dimer containing one zinc ion per monomer
Zn2Zur
BMC Systems Biology
Rz
RNA polymerase for zntA transcription
Dz
DNA of ZntA
Simulating in vitro transcriptional response of zinc homeostasis system in Escherichia coli
2
89
18950480
mRNA of ZnuC
Mw
M
Catherine
Lloyd
DNA of ZnuC
Dw
ZnZutA-DNA complex
Qz2
Mz
mRNA of ZnuC
apo-ZntR
Px
Rz
RNA polymerase for zntA transcription
mRNA of ZnuC
Mz
Auckland Bioengineering Institute
The University of Auckland
c.lloyd@auckland.ac.nz
Qw2
Zn4Zur-DNA complex
yeast
zinc homeostasis
Zn4Zur-DNA complex
Qw2
This CellML model runs in both PCEnv and COR to recreate the published results. The units have been checked and they are consistent. In this particular version of the model the zinc-buffering effects of TPEN are considered.
transcription initiation complex formed by Qz2 and Rz
Qz3
changed cmeta idea to be version aspecific,
updated curation status,
removed reference link from documentation
c.lloyd@auckland.ac.nz
Qz5
transcription initiation complex formed by Qz4 and Rz
2009-06-08T15:38:35+12:00
Qz4
apo-ZntA-DNA complex
Qz5
transcription initiation complex formed by Qz4 and Rz
Zn2Zur
Zur dimer containing one zinc ion per monomer
Py
Dw
DNA of ZnuC
James
Richard
Lawson
TPEN
Tp
2008-10-24 00:00
keyword
electrophysiology
yeast
zinc homeostasis
Catherine Lloyd
zinc-bound TPEN
Tp1
Py1
Zn4Zur
Zur dimer containing two zinc ions per monomer
active Zur
Dz
DNA of ZntA
2008-10-28T00:00:00+00:00
transcription initiation complex of ZnuC
Qw1
Catherine Lloyd
2009-06-08T15:53:40+12:00
electrophysiology
2008-05-19T00:00:00+00:00
2008-10-24 00:00