function [VOI, STATES, ALGEBRAIC, CONSTANTS] = mainFunction() % This is the "main function". In Matlab, things work best if you rename this function to match the filename. [VOI, STATES, ALGEBRAIC, CONSTANTS] = solveModel(); end function [algebraicVariableCount] = getAlgebraicVariableCount() % Used later when setting a global variable with the number of algebraic variables. % Note: This is not the "main method". algebraicVariableCount =140; end % There are a total of 26 entries in each of the rate and state variable arrays. % There are a total of 188 entries in the constant variable array. % function [VOI, STATES, ALGEBRAIC, CONSTANTS] = solveModel() % Create ALGEBRAIC of correct size global algebraicVariableCount; algebraicVariableCount = getAlgebraicVariableCount(); % Initialise constants and state variables [INIT_STATES, CONSTANTS] = initConsts; % Set timespan to solve over tspan = [0, 10]; % Set numerical accuracy options for ODE solver options = odeset('RelTol', 1e-06, 'AbsTol', 1e-06, 'MaxStep', 1); % Solve model with ODE solver [VOI, STATES] = ode15s(@(VOI, STATES)computeRates(VOI, STATES, CONSTANTS), tspan, INIT_STATES, options); % Compute algebraic variables [RATES, ALGEBRAIC] = computeRates(VOI, STATES, CONSTANTS); ALGEBRAIC = computeAlgebraic(ALGEBRAIC, CONSTANTS, STATES, VOI); % Plot state variables against variable of integration [LEGEND_STATES, LEGEND_ALGEBRAIC, LEGEND_VOI, LEGEND_CONSTANTS] = createLegends(); figure(); plot(VOI, STATES); xlabel(LEGEND_VOI); l = legend(LEGEND_STATES); set(l,'Interpreter','none'); end function [LEGEND_STATES, LEGEND_ALGEBRAIC, LEGEND_VOI, LEGEND_CONSTANTS] = createLegends() LEGEND_STATES = ''; LEGEND_ALGEBRAIC = ''; LEGEND_VOI = ''; LEGEND_CONSTANTS = ''; LEGEND_CONSTANTS(:,1) = strpad('NO_on in component strain_control (dimensionless)'); LEGEND_CONSTANTS(:,2) = strpad('pH_on in component strain_control (dimensionless)'); LEGEND_CONSTANTS(:,3) = strpad('SAC_on in component strain_control (dimensionless)'); LEGEND_VOI = strpad('time in component environment (ms)'); LEGEND_CONSTANTS(:,4) = strpad('V_myo in component cell_geom (mm3)'); LEGEND_CONSTANTS(:,5) = strpad('V_SR in component cell_geom (mm3)'); LEGEND_CONSTANTS(:,6) = strpad('N in component cell_geom (dimensionless)'); LEGEND_CONSTANTS(:,7) = strpad('A_cap in component cell_geom (mm2)'); LEGEND_CONSTANTS(:,141) = strpad('rho in component cell_geom (per_mm)'); LEGEND_STATES(:,1) = strpad('V in component membrane (mV)'); LEGEND_CONSTANTS(:,8) = strpad('R in component membrane (millijoule_per_mole_kelvin)'); LEGEND_CONSTANTS(:,9) = strpad('T in component membrane (kelvin)'); LEGEND_CONSTANTS(:,10) = strpad('F in component membrane (coulomb_per_mole)'); LEGEND_CONSTANTS(:,11) = strpad('CmF in component membrane (uF)'); LEGEND_CONSTANTS(:,150) = strpad('Cm in component membrane (uF_per_mm2)'); LEGEND_ALGEBRAIC(:,25) = strpad('i_Na in component sodium_current (uA_per_mm2)'); LEGEND_ALGEBRAIC(:,31) = strpad('i_t in component Ca_independent_transient_outward_K_current (uA_per_mm2)'); LEGEND_ALGEBRAIC(:,32) = strpad('i_ss in component steady_state_outward_K_current (uA_per_mm2)'); LEGEND_ALGEBRAIC(:,37) = strpad('i_f in component hyperpolarisation_activated_current (uA_per_mm2)'); LEGEND_ALGEBRAIC(:,33) = strpad('i_K1 in component inward_rectifier (uA_per_mm2)'); LEGEND_ALGEBRAIC(:,42) = strpad('i_NaK in component sodium_potassium_pump (uA_per_mm2)'); LEGEND_ALGEBRAIC(:,10) = strpad('i_Stim in component I_stimulus (uA_per_mm2)'); LEGEND_ALGEBRAIC(:,128) = strpad('I_CaL in component I_Ca_L (uA_per_mm2)'); LEGEND_ALGEBRAIC(:,88) = strpad('I_NaCa in component NCX (uA_per_mm2)'); LEGEND_ALGEBRAIC(:,84) = strpad('I_Cab in component Cab (uA_per_mm2)'); LEGEND_ALGEBRAIC(:,82) = strpad('I_pCa in component SL_pump (uA_per_mm2)'); LEGEND_ALGEBRAIC(:,38) = strpad('i_B_Na in component background_currents (uA_per_mm2)'); LEGEND_ALGEBRAIC(:,39) = strpad('i_B_K in component background_currents (uA_per_mm2)'); LEGEND_ALGEBRAIC(:,23) = strpad('I_SAC_Na in component SAC_current (uA_per_mm2)'); LEGEND_ALGEBRAIC(:,28) = strpad('I_SAC_K in component SAC_current (uA_per_mm2)'); LEGEND_ALGEBRAIC(:,30) = strpad('I_Ko in component KSA_current (uA_per_mm2)'); LEGEND_ALGEBRAIC(:,74) = strpad('I_Cl in component intracellular_ion_concentrations (uA_per_mm2)'); LEGEND_ALGEBRAIC(:,77) = strpad('I_H in component intracellular_ion_concentrations (uA_per_mm2)'); LEGEND_CONSTANTS(:,12) = strpad('stim_period in component I_stimulus (ms)'); LEGEND_CONSTANTS(:,13) = strpad('stim_duration in component I_stimulus (ms)'); LEGEND_CONSTANTS(:,14) = strpad('stim_amplitude in component I_stimulus (uA)'); LEGEND_ALGEBRAIC(:,21) = strpad('E_Na in component sodium_current (mV)'); LEGEND_ALGEBRAIC(:,26) = strpad('E_K in component Ca_independent_transient_outward_K_current (mV)'); LEGEND_CONSTANTS(:,15) = strpad('ExtensionRatio in component Myofilaments (dimensionless)'); LEGEND_CONSTANTS(:,16) = strpad('g_SAC in component SAC_current (mS)'); LEGEND_ALGEBRAIC(:,29) = strpad('I_SAC in component SAC_current (uA_per_mm2)'); LEGEND_CONSTANTS(:,142) = strpad('gamma_SLSAC in component SAC_current (dimensionless)'); LEGEND_CONSTANTS(:,17) = strpad('E_R in component SAC_current (mV)'); LEGEND_CONSTANTS(:,143) = strpad('r in component SAC_current (dimensionless)'); LEGEND_CONSTANTS(:,18) = strpad('g_Ko in component KSA_current (mS)'); LEGEND_CONSTANTS(:,144) = strpad('gamma_SLKO in component KSA_current (dimensionless)'); LEGEND_CONSTANTS(:,19) = strpad('g_Na in component sodium_current (mS)'); LEGEND_CONSTANTS(:,145) = strpad('g_Na_endo in component sodium_current (mS)'); LEGEND_STATES(:,2) = strpad('Na_i in component intracellular_ion_concentrations (mM)'); LEGEND_CONSTANTS(:,20) = strpad('Na_o in component standard_ionic_concentrations (mM)'); LEGEND_STATES(:,3) = strpad('m in component sodium_current_m_gate (dimensionless)'); LEGEND_STATES(:,4) = strpad('h in component sodium_current_h_gate (dimensionless)'); LEGEND_STATES(:,5) = strpad('j in component sodium_current_j_gate (dimensionless)'); LEGEND_ALGEBRAIC(:,1) = strpad('m_infinity in component sodium_current_m_gate (dimensionless)'); LEGEND_ALGEBRAIC(:,13) = strpad('tau_m in component sodium_current_m_gate (ms)'); LEGEND_ALGEBRAIC(:,2) = strpad('h_infinity in component sodium_current_h_gate (dimensionless)'); LEGEND_ALGEBRAIC(:,14) = strpad('tau_h in component sodium_current_h_gate (ms)'); LEGEND_ALGEBRAIC(:,3) = strpad('j_infinity in component sodium_current_j_gate (dimensionless)'); LEGEND_ALGEBRAIC(:,15) = strpad('tau_j in component sodium_current_j_gate (ms)'); LEGEND_CONSTANTS(:,21) = strpad('g_t in component Ca_independent_transient_outward_K_current (mS)'); LEGEND_CONSTANTS(:,146) = strpad('g_t_endo in component Ca_independent_transient_outward_K_current (mS)'); LEGEND_CONSTANTS(:,22) = strpad('a_endo in component Ca_independent_transient_outward_K_current (dimensionless)'); LEGEND_CONSTANTS(:,23) = strpad('b_endo in component Ca_independent_transient_outward_K_current (dimensionless)'); LEGEND_CONSTANTS(:,24) = strpad('K_o in component standard_ionic_concentrations (mM)'); LEGEND_STATES(:,6) = strpad('K_i in component intracellular_ion_concentrations (mM)'); LEGEND_STATES(:,7) = strpad('r in component Ca_independent_transient_outward_K_current_r_gate (dimensionless)'); LEGEND_STATES(:,8) = strpad('s in component Ca_independent_transient_outward_K_current_s_gate (dimensionless)'); LEGEND_STATES(:,9) = strpad('s_slow in component Ca_independent_transient_outward_K_current_s_slow_gate (dimensionless)'); LEGEND_ALGEBRAIC(:,16) = strpad('tau_r in component Ca_independent_transient_outward_K_current_r_gate (ms)'); LEGEND_ALGEBRAIC(:,4) = strpad('r_infinity in component Ca_independent_transient_outward_K_current_r_gate (dimensionless)'); LEGEND_ALGEBRAIC(:,17) = strpad('tau_s_endo in component Ca_independent_transient_outward_K_current_s_gate (ms)'); LEGEND_ALGEBRAIC(:,5) = strpad('s_infinity in component Ca_independent_transient_outward_K_current_s_gate (dimensionless)'); LEGEND_ALGEBRAIC(:,18) = strpad('tau_s_slow_endo in component Ca_independent_transient_outward_K_current_s_slow_gate (ms)'); LEGEND_ALGEBRAIC(:,6) = strpad('s_slow_infinity in component Ca_independent_transient_outward_K_current_s_slow_gate (dimensionless)'); LEGEND_CONSTANTS(:,25) = strpad('g_ss in component steady_state_outward_K_current (mS)'); LEGEND_STATES(:,10) = strpad('r_ss in component steady_state_outward_K_current_r_ss_gate (dimensionless)'); LEGEND_STATES(:,11) = strpad('s_ss in component steady_state_outward_K_current_s_ss_gate (dimensionless)'); LEGEND_ALGEBRAIC(:,19) = strpad('tau_r_ss in component steady_state_outward_K_current_r_ss_gate (ms)'); LEGEND_ALGEBRAIC(:,7) = strpad('r_ss_infinity in component steady_state_outward_K_current_r_ss_gate (dimensionless)'); LEGEND_CONSTANTS(:,147) = strpad('tau_s_ss in component steady_state_outward_K_current_s_ss_gate (ms)'); LEGEND_ALGEBRAIC(:,8) = strpad('s_ss_infinity in component steady_state_outward_K_current_s_ss_gate (dimensionless)'); LEGEND_CONSTANTS(:,26) = strpad('g_K1 in component inward_rectifier (mS)'); LEGEND_ALGEBRAIC(:,34) = strpad('i_f_Na in component hyperpolarisation_activated_current (uA_per_mm2)'); LEGEND_ALGEBRAIC(:,35) = strpad('i_f_K in component hyperpolarisation_activated_current (uA_per_mm2)'); LEGEND_CONSTANTS(:,27) = strpad('g_f in component hyperpolarisation_activated_current (mS)'); LEGEND_CONSTANTS(:,28) = strpad('f_Na in component hyperpolarisation_activated_current (dimensionless)'); LEGEND_CONSTANTS(:,148) = strpad('f_K in component hyperpolarisation_activated_current (dimensionless)'); LEGEND_STATES(:,12) = strpad('y in component hyperpolarisation_activated_current_y_gate (dimensionless)'); LEGEND_ALGEBRAIC(:,20) = strpad('tau_y in component hyperpolarisation_activated_current_y_gate (ms)'); LEGEND_ALGEBRAIC(:,9) = strpad('y_infinity in component hyperpolarisation_activated_current_y_gate (dimensionless)'); LEGEND_CONSTANTS(:,29) = strpad('g_B_Na in component background_currents (mS)'); LEGEND_CONSTANTS(:,30) = strpad('g_B_K in component background_currents (mS)'); LEGEND_CONSTANTS(:,31) = strpad('scale_Na in component background_currents (dimensionless)'); LEGEND_CONSTANTS(:,32) = strpad('scale_K in component background_currents (dimensionless)'); LEGEND_CONSTANTS(:,33) = strpad('i_NaK_max in component sodium_potassium_pump (uA)'); LEGEND_CONSTANTS(:,34) = strpad('K_m_K in component sodium_potassium_pump (mM)'); LEGEND_CONSTANTS(:,35) = strpad('K_m_Na in component sodium_potassium_pump (mM)'); LEGEND_CONSTANTS(:,149) = strpad('sigma in component sodium_potassium_pump (dimensionless)'); LEGEND_ALGEBRAIC(:,40) = strpad('p_nai in component sodium_potassium_pump (dimensionless)'); LEGEND_ALGEBRAIC(:,41) = strpad('p_v in component sodium_potassium_pump (dimensionless)'); LEGEND_ALGEBRAIC(:,43) = strpad('jco2 in component J_CO2 (mM_per_ms)'); LEGEND_CONSTANTS(:,36) = strpad('Pco2 in component J_CO2 (mm_per_ms)'); LEGEND_STATES(:,13) = strpad('CO2i in component intracellular_ion_concentrations (mM)'); LEGEND_CONSTANTS(:,183) = strpad('CO2e in component intracellular_ion_concentrations (mM)'); LEGEND_STATES(:,14) = strpad('pH_i in component intracellular_ion_concentrations (dimensionless)'); LEGEND_CONSTANTS(:,37) = strpad('pH_e in component intracellular_ion_concentrations (dimensionless)'); LEGEND_ALGEBRAIC(:,52) = strpad('v_nhe in component comp_v_nhe_exchanger (mM_per_ms)'); LEGEND_CONSTANTS(:,38) = strpad('KA in component comp_v_nhe_exchanger (mM)'); LEGEND_CONSTANTS(:,39) = strpad('KB in component comp_v_nhe_exchanger (mM)'); LEGEND_CONSTANTS(:,40) = strpad('kp1 in component comp_v_nhe_exchanger (per_ms)'); LEGEND_CONSTANTS(:,41) = strpad('km1 in component comp_v_nhe_exchanger (per_ms)'); LEGEND_CONSTANTS(:,42) = strpad('kp2 in component comp_v_nhe_exchanger (per_ms)'); LEGEND_CONSTANTS(:,164) = strpad('km2 in component comp_v_nhe_exchanger (dimensionless)'); LEGEND_CONSTANTS(:,43) = strpad('K_Hi in component comp_v_nhe_exchanger (mM)'); LEGEND_CONSTANTS(:,44) = strpad('n_Hi in component comp_v_nhe_exchanger (dimensionless)'); LEGEND_CONSTANTS(:,167) = strpad('Be in component comp_v_nhe_exchanger (mM)'); LEGEND_ALGEBRAIC(:,47) = strpad('Bi in component comp_v_nhe_exchanger (mM)'); LEGEND_ALGEBRAIC(:,48) = strpad('am1 in component comp_v_nhe_exchanger (per_ms)'); LEGEND_CONSTANTS(:,170) = strpad('ap1 in component comp_v_nhe_exchanger (per_ms)'); LEGEND_CONSTANTS(:,172) = strpad('am2 in component comp_v_nhe_exchanger (per_ms)'); LEGEND_ALGEBRAIC(:,49) = strpad('ap2 in component comp_v_nhe_exchanger (per_ms)'); LEGEND_ALGEBRAIC(:,50) = strpad('reg in component comp_v_nhe_exchanger (dimensionless)'); LEGEND_ALGEBRAIC(:,51) = strpad('flux_nhe in component comp_v_nhe_exchanger (dimensionless)'); LEGEND_CONSTANTS(:,45) = strpad('Q_10Scaler in component comp_v_nhe_exchanger (dimensionless)'); LEGEND_CONSTANTS(:,157) = strpad('gamma_NHE in component comp_v_nhe_exchanger (dimensionless)'); LEGEND_CONSTANTS(:,161) = strpad('K_Hs in component comp_v_nhe_exchanger (mM)'); LEGEND_CONSTANTS(:,46) = strpad('Cle in component intracellular_ion_concentrations (mM)'); LEGEND_STATES(:,15) = strpad('Cli in component intracellular_ion_concentrations (mM)'); LEGEND_ALGEBRAIC(:,58) = strpad('v_che in component comp_v_che_exchanger (mM_per_ms)'); LEGEND_CONSTANTS(:,47) = strpad('K_Cl in component comp_v_che_exchanger (mM)'); LEGEND_CONSTANTS(:,48) = strpad('K_OH in component comp_v_che_exchanger (mM)'); LEGEND_CONSTANTS(:,49) = strpad('kp1 in component comp_v_che_exchanger (per_min)'); LEGEND_CONSTANTS(:,50) = strpad('km1 in component comp_v_che_exchanger (per_min)'); LEGEND_CONSTANTS(:,51) = strpad('kp2 in component comp_v_che_exchanger (per_min)'); LEGEND_CONSTANTS(:,173) = strpad('km2 in component comp_v_che_exchanger (per_min)'); LEGEND_CONSTANTS(:,174) = strpad('OHe in component comp_v_che_exchanger (mM)'); LEGEND_ALGEBRAIC(:,53) = strpad('OHi in component comp_v_che_exchanger (mM)'); LEGEND_CONSTANTS(:,175) = strpad('a in component comp_v_che_exchanger (dimensionless)'); LEGEND_CONSTANTS(:,176) = strpad('b in component comp_v_che_exchanger (dimensionless)'); LEGEND_ALGEBRAIC(:,54) = strpad('c in component comp_v_che_exchanger (dimensionless)'); LEGEND_ALGEBRAIC(:,55) = strpad('d in component comp_v_che_exchanger (dimensionless)'); LEGEND_ALGEBRAIC(:,56) = strpad('s1 in component comp_v_che_exchanger (dimensionless)'); LEGEND_ALGEBRAIC(:,57) = strpad('s6 in component comp_v_che_exchanger (dimensionless)'); LEGEND_CONSTANTS(:,52) = strpad('Q_10Scaler in component comp_v_che_exchanger (dimensionless)'); LEGEND_CONSTANTS(:,184) = strpad('HCO3e in component intracellular_ion_concentrations (mM)'); LEGEND_STATES(:,16) = strpad('HCO3i in component intracellular_ion_concentrations (mM)'); LEGEND_ALGEBRAIC(:,65) = strpad('v_nbc in component comp_v_nbc (mM_per_ms)'); LEGEND_CONSTANTS(:,53) = strpad('K_Na in component comp_v_nbc (mM)'); LEGEND_CONSTANTS(:,54) = strpad('K_HCO3 in component comp_v_nbc (mM)'); LEGEND_CONSTANTS(:,55) = strpad('kp1 in component comp_v_nbc (per_min)'); LEGEND_CONSTANTS(:,56) = strpad('km1 in component comp_v_nbc (per_min)'); LEGEND_CONSTANTS(:,57) = strpad('kp2 in component comp_v_nbc (per_min)'); LEGEND_CONSTANTS(:,177) = strpad('km2 in component comp_v_nbc (per_min)'); LEGEND_CONSTANTS(:,58) = strpad('K_Hi in component comp_v_nbc (mM)'); LEGEND_CONSTANTS(:,59) = strpad('n_Hi in component comp_v_nbc (dimensionless)'); LEGEND_CONSTANTS(:,60) = strpad('K_He in component comp_v_nbc (mM)'); LEGEND_CONSTANTS(:,61) = strpad('n_He in component comp_v_nbc (dimensionless)'); LEGEND_CONSTANTS(:,178) = strpad('He in component comp_v_nbc (mM)'); LEGEND_ALGEBRAIC(:,61) = strpad('Hi in component comp_v_nbc (mM)'); LEGEND_CONSTANTS(:,185) = strpad('a in component comp_v_nbc (dimensionless)'); LEGEND_CONSTANTS(:,186) = strpad('b in component comp_v_nbc (dimensionless)'); LEGEND_ALGEBRAIC(:,59) = strpad('c in component comp_v_nbc (dimensionless)'); LEGEND_ALGEBRAIC(:,60) = strpad('d in component comp_v_nbc (dimensionless)'); LEGEND_ALGEBRAIC(:,62) = strpad('s1 in component comp_v_nbc (dimensionless)'); LEGEND_ALGEBRAIC(:,63) = strpad('s6 in component comp_v_nbc (dimensionless)'); LEGEND_ALGEBRAIC(:,64) = strpad('reg in component comp_v_nbc (dimensionless)'); LEGEND_CONSTANTS(:,62) = strpad('Q_10Scaler in component comp_v_nbc (dimensionless)'); LEGEND_ALGEBRAIC(:,72) = strpad('v_ae in component comp_v_ae (mM_per_ms)'); LEGEND_CONSTANTS(:,63) = strpad('K_Cl in component comp_v_ae (mM)'); LEGEND_CONSTANTS(:,64) = strpad('K_HCO3 in component comp_v_ae (mM)'); LEGEND_CONSTANTS(:,65) = strpad('kp1 in component comp_v_ae (per_min)'); LEGEND_CONSTANTS(:,66) = strpad('km1 in component comp_v_ae (per_min)'); LEGEND_CONSTANTS(:,67) = strpad('kp2 in component comp_v_ae (per_min)'); LEGEND_CONSTANTS(:,181) = strpad('km2 in component comp_v_ae (per_min)'); LEGEND_CONSTANTS(:,68) = strpad('K_Hi in component comp_v_ae (mM)'); LEGEND_CONSTANTS(:,69) = strpad('n_Hi in component comp_v_ae (dimensionless)'); LEGEND_CONSTANTS(:,70) = strpad('K_He in component comp_v_ae (mM)'); LEGEND_CONSTANTS(:,71) = strpad('n_He in component comp_v_ae (dimensionless)'); LEGEND_CONSTANTS(:,182) = strpad('He in component comp_v_ae (mM)'); LEGEND_ALGEBRAIC(:,66) = strpad('Hi in component comp_v_ae (mM)'); LEGEND_CONSTANTS(:,187) = strpad('a in component comp_v_ae (dimensionless)'); LEGEND_CONSTANTS(:,188) = strpad('b in component comp_v_ae (dimensionless)'); LEGEND_ALGEBRAIC(:,67) = strpad('c in component comp_v_ae (dimensionless)'); LEGEND_ALGEBRAIC(:,68) = strpad('d in component comp_v_ae (dimensionless)'); LEGEND_ALGEBRAIC(:,69) = strpad('s1 in component comp_v_ae (dimensionless)'); LEGEND_ALGEBRAIC(:,70) = strpad('s6 in component comp_v_ae (dimensionless)'); LEGEND_ALGEBRAIC(:,71) = strpad('reg in component comp_v_ae (dimensionless)'); LEGEND_CONSTANTS(:,72) = strpad('Q_10Scaler in component comp_v_ae (dimensionless)'); LEGEND_CONSTANTS(:,179) = strpad('gamma_AE in component comp_v_ae (dimensionless)'); LEGEND_CONSTANTS(:,180) = strpad('K_Hs in component comp_v_ae (mM)'); LEGEND_CONSTANTS(:,73) = strpad('PP_co2e in component intracellular_ion_concentrations (dimensionless)'); LEGEND_CONSTANTS(:,74) = strpad('CO_2sol in component intracellular_ion_concentrations (dimensionless)'); LEGEND_CONSTANTS(:,75) = strpad('P_atm in component intracellular_ion_concentrations (dimensionless)'); LEGEND_CONSTANTS(:,76) = strpad('kf_co2hyd in component intracellular_ion_concentrations (per_ms)'); LEGEND_CONSTANTS(:,77) = strpad('kr_co2hyd in component intracellular_ion_concentrations (per_mM_per_ms)'); LEGEND_ALGEBRAIC(:,80) = strpad('v_co2hyd in component intracellular_ion_concentrations (mM_per_ms)'); LEGEND_CONSTANTS(:,78) = strpad('pKa_ib1 in component intracellular_ion_concentrations (dimensionless)'); LEGEND_CONSTANTS(:,79) = strpad('ib1 in component intracellular_ion_concentrations (mM)'); LEGEND_CONSTANTS(:,80) = strpad('pKa_ib2 in component intracellular_ion_concentrations (dimensionless)'); LEGEND_CONSTANTS(:,81) = strpad('ib2 in component intracellular_ion_concentrations (mM)'); LEGEND_ALGEBRAIC(:,78) = strpad('beta_intr in component intracellular_ion_concentrations (dimensionless)'); LEGEND_CONSTANTS(:,82) = strpad('pH_scale in component intracellular_ion_concentrations (dimensionless)'); LEGEND_ALGEBRAIC(:,44) = strpad('nai_Nak in component intracellular_ion_concentrations (mM_per_ms)'); LEGEND_ALGEBRAIC(:,79) = strpad('nai_NHE in component intracellular_ion_concentrations (mM_per_ms)'); LEGEND_ALGEBRAIC(:,81) = strpad('nai_NBC in component intracellular_ion_concentrations (mM_per_ms)'); LEGEND_ALGEBRAIC(:,89) = strpad('nai_flux in component intracellular_ion_concentrations (mM_per_ms)'); LEGEND_ALGEBRAIC(:,36) = strpad('nai_bg in component intracellular_ion_concentrations (mM_per_ms)'); LEGEND_ALGEBRAIC(:,45) = strpad('K_Nak in component intracellular_ion_concentrations (mM_per_ms)'); LEGEND_ALGEBRAIC(:,46) = strpad('K_flux in component intracellular_ion_concentrations (mM_per_ms)'); LEGEND_ALGEBRAIC(:,73) = strpad('E_Cl in component intracellular_ion_concentrations (mV)'); LEGEND_CONSTANTS(:,83) = strpad('g_Cl in component intracellular_ion_concentrations (mM_per_ms)'); LEGEND_ALGEBRAIC(:,76) = strpad('E_H in component intracellular_ion_concentrations (mV)'); LEGEND_CONSTANTS(:,84) = strpad('g_H in component intracellular_ion_concentrations (mM_per_ms)'); LEGEND_CONSTANTS(:,151) = strpad('H_o in component intracellular_ion_concentrations (mM)'); LEGEND_ALGEBRAIC(:,75) = strpad('H_i in component intracellular_ion_concentrations (mM)'); LEGEND_CONSTANTS(:,85) = strpad('J_CO2 in component intracellular_ion_concentrations (mM_per_ms)'); LEGEND_ALGEBRAIC(:,90) = strpad('nai_NaCa in component intracellular_ion_concentrations (mM_per_ms)'); LEGEND_ALGEBRAIC(:,27) = strpad('nai_na in component intracellular_ion_concentrations (mM_per_ms)'); LEGEND_ALGEBRAIC(:,92) = strpad('nai_total in component intracellular_ion_concentrations (mM_per_ms)'); LEGEND_CONSTANTS(:,86) = strpad('Ca_o in component standard_ionic_concentrations (mM)'); LEGEND_CONSTANTS(:,87) = strpad('g_pCa in component SL_pump (mM_per_ms)'); LEGEND_CONSTANTS(:,88) = strpad('K_mpCa in component SL_pump (mM)'); LEGEND_STATES(:,17) = strpad('Ca_i in component ionic_concentrations (mM)'); LEGEND_CONSTANTS(:,89) = strpad('delta in component Ca_voltage (per_mV)'); LEGEND_ALGEBRAIC(:,83) = strpad('E_Ca in component Cab (mV)'); LEGEND_CONSTANTS(:,90) = strpad('g_Cab in component Cab (mM_per_ms)'); LEGEND_ALGEBRAIC(:,126) = strpad('J_LC in component L_flux (mM_per_ms_per_mm3)'); LEGEND_CONSTANTS(:,91) = strpad('K_mNa in component NCX (mM)'); LEGEND_CONSTANTS(:,92) = strpad('K_mCa in component NCX (mM)'); LEGEND_CONSTANTS(:,93) = strpad('eta in component NCX (dimensionless)'); LEGEND_CONSTANTS(:,94) = strpad('k_sat in component NCX (dimensionless)'); LEGEND_CONSTANTS(:,95) = strpad('g_NCX in component NCX (mM_per_ms)'); LEGEND_ALGEBRAIC(:,85) = strpad('edv in component NCX (dimensionless)'); LEGEND_ALGEBRAIC(:,86) = strpad('edv2 in component NCX (dimensionless)'); LEGEND_ALGEBRAIC(:,87) = strpad('Nai3 in component NCX (mM3)'); LEGEND_CONSTANTS(:,152) = strpad('Nae3 in component NCX (mM3)'); LEGEND_CONSTANTS(:,96) = strpad('g_SERCA in component SERCA (mM_per_ms)'); LEGEND_CONSTANTS(:,97) = strpad('K_SERCA in component SERCA (mM)'); LEGEND_ALGEBRAIC(:,91) = strpad('I_SERCA in component SERCA (mM_per_ms)'); LEGEND_STATES(:,18) = strpad('Ca_SR in component ionic_concentrations (mM)'); LEGEND_STATES(:,19) = strpad('TRPN in component ionic_concentrations (mM)'); LEGEND_CONSTANTS(:,98) = strpad('B_CMDN in component ionic_concentrations (mM)'); LEGEND_CONSTANTS(:,99) = strpad('K_CMDN in component ionic_concentrations (mM)'); LEGEND_CONSTANTS(:,100) = strpad('g_SRl in component ionic_concentrations (per_ms)'); LEGEND_ALGEBRAIC(:,140) = strpad('J_TPRN in component troponin (dimensionless)'); LEGEND_ALGEBRAIC(:,130) = strpad('J_RY in component R_flux (mM_per_ms_per_mm3)'); LEGEND_ALGEBRAIC(:,132) = strpad('J_SR in component ionic_concentrations (mM_per_ms)'); LEGEND_ALGEBRAIC(:,11) = strpad('Ca_b in component ionic_concentrations (mM)'); LEGEND_CONSTANTS(:,101) = strpad('B_TRPN in component troponin (mM)'); LEGEND_CONSTANTS(:,102) = strpad('g_D in component Ca_conductances (mm3_per_ms)'); LEGEND_CONSTANTS(:,103) = strpad('J_R in component Ca_conductances (mm3_per_ms)'); LEGEND_CONSTANTS(:,104) = strpad('J_L in component Ca_conductances (mm3_per_ms)'); LEGEND_ALGEBRAIC(:,94) = strpad('expmdV in component Ca_voltage (dimensionless)'); LEGEND_ALGEBRAIC(:,95) = strpad('expVL in component Ca_voltage (dimensionless)'); LEGEND_ALGEBRAIC(:,93) = strpad('dV in component Ca_voltage (mV)'); LEGEND_CONSTANTS(:,105) = strpad('V_L0 in component Ca_voltage (mV)'); LEGEND_CONSTANTS(:,106) = strpad('delta_VL in component Ca_voltage (mV)'); LEGEND_ALGEBRAIC(:,12) = strpad('C_cc in component C_ij (mM)'); LEGEND_ALGEBRAIC(:,98) = strpad('C_oc in component C_ij (mM)'); LEGEND_ALGEBRAIC(:,97) = strpad('C_co in component C_ij (mM)'); LEGEND_ALGEBRAIC(:,96) = strpad('C_oo in component C_ij (mM)'); LEGEND_ALGEBRAIC(:,102) = strpad('J_Loo in component J_ij (mM_per_ms)'); LEGEND_ALGEBRAIC(:,101) = strpad('J_Loc in component J_ij (mM_per_ms)'); LEGEND_ALGEBRAIC(:,99) = strpad('J_Rco in component J_ij (mM_per_ms)'); LEGEND_ALGEBRAIC(:,100) = strpad('J_Roo in component J_ij (mM_per_ms)'); LEGEND_CONSTANTS(:,153) = strpad('t_R in component Ca_tau (ms)'); LEGEND_CONSTANTS(:,107) = strpad('t_L in component Ca_tau (ms)'); LEGEND_ALGEBRAIC(:,105) = strpad('epsilon_m in component epsilon (per_ms)'); LEGEND_ALGEBRAIC(:,103) = strpad('epsilon_pco in component epsilon (per_ms)'); LEGEND_ALGEBRAIC(:,104) = strpad('epsilon_pcc in component epsilon (per_ms)'); LEGEND_CONSTANTS(:,108) = strpad('a in component epsilon (dimensionless)'); LEGEND_CONSTANTS(:,109) = strpad('b in component epsilon (dimensionless)'); LEGEND_CONSTANTS(:,110) = strpad('tau_L in component epsilon (ms)'); LEGEND_CONSTANTS(:,111) = strpad('K_L in component epsilon (mM)'); LEGEND_ALGEBRAIC(:,106) = strpad('alpha_p in component alpha (per_ms)'); LEGEND_CONSTANTS(:,158) = strpad('alpha_m in component alpha (per_ms)'); LEGEND_CONSTANTS(:,112) = strpad('phi_L in component alpha (dimensionless)'); LEGEND_CONSTANTS(:,165) = strpad('phi_R in component RyR_param (dimensionless)'); LEGEND_CONSTANTS(:,113) = strpad('phi_R_base in component RyR_param (dimensionless)'); LEGEND_CONSTANTS(:,114) = strpad('tau_R in component RyR_param (ms)'); LEGEND_CONSTANTS(:,115) = strpad('theta_R in component RyR_param (dimensionless)'); LEGEND_CONSTANTS(:,116) = strpad('K_RyR in component RyR_param (mM)'); LEGEND_CONSTANTS(:,162) = strpad('gamma_NO in component RyR_param (dimensionless)'); LEGEND_ALGEBRAIC(:,107) = strpad('beta_poc in component beta (per_ms)'); LEGEND_ALGEBRAIC(:,108) = strpad('beta_pcc in component beta (per_ms)'); LEGEND_CONSTANTS(:,168) = strpad('beta_m in component beta (per_ms)'); LEGEND_ALGEBRAIC(:,109) = strpad('mu_poc in component mu_ij (per_ms)'); LEGEND_ALGEBRAIC(:,110) = strpad('mu_pcc in component mu_ij (per_ms)'); LEGEND_ALGEBRAIC(:,111) = strpad('mu_moc in component mu_ij (per_ms)'); LEGEND_ALGEBRAIC(:,112) = strpad('mu_mcc in component mu_ij (per_ms)'); LEGEND_CONSTANTS(:,117) = strpad('c in component mu_ij (dimensionless)'); LEGEND_CONSTANTS(:,118) = strpad('d in component mu_ij (dimensionless)'); LEGEND_ALGEBRAIC(:,114) = strpad('y_oc in component y_ij (dimensionless)'); LEGEND_ALGEBRAIC(:,115) = strpad('y_co in component y_ij (dimensionless)'); LEGEND_ALGEBRAIC(:,116) = strpad('y_oo in component y_ij (dimensionless)'); LEGEND_ALGEBRAIC(:,117) = strpad('y_cc in component y_ij (dimensionless)'); LEGEND_ALGEBRAIC(:,113) = strpad('denom in component y_ij (per_ms3)'); LEGEND_ALGEBRAIC(:,119) = strpad('r_1 in component r_i (per_ms)'); LEGEND_ALGEBRAIC(:,121) = strpad('r_2 in component r_i (per_ms)'); LEGEND_ALGEBRAIC(:,123) = strpad('r_3 in component r_i (per_ms)'); LEGEND_ALGEBRAIC(:,125) = strpad('r_4 in component r_i (per_ms)'); LEGEND_ALGEBRAIC(:,127) = strpad('r_5 in component r_i (per_ms)'); LEGEND_ALGEBRAIC(:,129) = strpad('r_6 in component r_i (per_ms)'); LEGEND_ALGEBRAIC(:,131) = strpad('r_7 in component r_i (per_ms)'); LEGEND_ALGEBRAIC(:,133) = strpad('r_8 in component r_i (per_ms)'); LEGEND_STATES(:,20) = strpad('z_1 in component z_i (dimensionless)'); LEGEND_STATES(:,21) = strpad('z_2 in component z_i (dimensionless)'); LEGEND_STATES(:,22) = strpad('z_3 in component z_i (dimensionless)'); LEGEND_ALGEBRAIC(:,134) = strpad('z_4 in component z_i (dimensionless)'); LEGEND_ALGEBRAIC(:,118) = strpad('J_R1 in component J_values (mM_per_ms)'); LEGEND_ALGEBRAIC(:,120) = strpad('J_R3 in component J_values (mM_per_ms)'); LEGEND_ALGEBRAIC(:,122) = strpad('J_L1 in component J_values (mM_per_ms)'); LEGEND_ALGEBRAIC(:,124) = strpad('J_L2 in component J_values (mM_per_ms)'); LEGEND_ALGEBRAIC(:,139) = strpad('betaCab in component troponin (per_ms)'); LEGEND_CONSTANTS(:,119) = strpad('k_on in component troponin (per_mM_per_ms)'); LEGEND_CONSTANTS(:,120) = strpad('k_off in component troponin (per_ms)'); LEGEND_CONSTANTS(:,121) = strpad('gamma_trpn in component troponin (dimensionless)'); LEGEND_CONSTANTS(:,122) = strpad('TRPN_tot in component troponin (mM)'); LEGEND_ALGEBRAIC(:,138) = strpad('Tension in component Cross_Bridges (N_per_mm2)'); LEGEND_CONSTANTS(:,123) = strpad('T_ref in component length_independent_tension (N_per_mm2)'); LEGEND_CONSTANTS(:,154) = strpad('lamda in component Myofilaments (dimensionless)'); LEGEND_CONSTANTS(:,155) = strpad('dExtensionRatiodt in component Myofilaments (per_ms)'); LEGEND_CONSTANTS(:,156) = strpad('lambda_prev in component Myofilaments (dimensionless)'); LEGEND_STATES(:,23) = strpad('z in component tropomyosin (dimensionless)'); LEGEND_CONSTANTS(:,171) = strpad('z_max in component tropomyosin (dimensionless)'); LEGEND_CONSTANTS(:,124) = strpad('alpha_0 in component tropomyosin (per_ms)'); LEGEND_CONSTANTS(:,125) = strpad('alpha_r1 in component tropomyosin (per_ms)'); LEGEND_CONSTANTS(:,126) = strpad('alpha_r2 in component tropomyosin (per_ms)'); LEGEND_CONSTANTS(:,127) = strpad('n_Rel in component tropomyosin (dimensionless)'); LEGEND_CONSTANTS(:,128) = strpad('K_z in component tropomyosin (dimensionless)'); LEGEND_CONSTANTS(:,129) = strpad('n_Hill in component tropomyosin (dimensionless)'); LEGEND_CONSTANTS(:,130) = strpad('Ca_50ref in component tropomyosin (mM)'); LEGEND_CONSTANTS(:,131) = strpad('z_p in component tropomyosin (dimensionless)'); LEGEND_CONSTANTS(:,132) = strpad('beta_1 in component tropomyosin (dimensionless)'); LEGEND_CONSTANTS(:,166) = strpad('Ca_50 in component tropomyosin (mM)'); LEGEND_CONSTANTS(:,169) = strpad('Ca_TRPN_50 in component tropomyosin (mM)'); LEGEND_CONSTANTS(:,159) = strpad('K_2 in component tropomyosin (dimensionless)'); LEGEND_CONSTANTS(:,163) = strpad('K_1 in component tropomyosin (dimensionless)'); LEGEND_ALGEBRAIC(:,22) = strpad('alpha_Tm in component tropomyosin (per_ms)'); LEGEND_ALGEBRAIC(:,24) = strpad('beta_Tm in component tropomyosin (per_ms)'); LEGEND_CONSTANTS(:,133) = strpad('beta_0 in component filament_overlap (dimensionless)'); LEGEND_CONSTANTS(:,160) = strpad('overlap in component filament_overlap (dimensionless)'); LEGEND_ALGEBRAIC(:,135) = strpad('T_Base in component length_independent_tension (N_per_mm2)'); LEGEND_ALGEBRAIC(:,136) = strpad('T_0 in component isometric_tension (N_per_mm2)'); LEGEND_ALGEBRAIC(:,137) = strpad('Q in component Cross_Bridges (dimensionless)'); LEGEND_CONSTANTS(:,134) = strpad('a in component Cross_Bridges (dimensionless)'); LEGEND_STATES(:,24) = strpad('Q_1 in component Cross_Bridges (dimensionless)'); LEGEND_STATES(:,25) = strpad('Q_2 in component Cross_Bridges (dimensionless)'); LEGEND_STATES(:,26) = strpad('Q_3 in component Cross_Bridges (dimensionless)'); LEGEND_CONSTANTS(:,135) = strpad('A_1 in component Cross_Bridges (dimensionless)'); LEGEND_CONSTANTS(:,136) = strpad('A_2 in component Cross_Bridges (dimensionless)'); LEGEND_CONSTANTS(:,137) = strpad('A_3 in component Cross_Bridges (dimensionless)'); LEGEND_CONSTANTS(:,138) = strpad('alpha_1 in component Cross_Bridges (dimensionless)'); LEGEND_CONSTANTS(:,139) = strpad('alpha_2 in component Cross_Bridges (dimensionless)'); LEGEND_CONSTANTS(:,140) = strpad('alpha_3 in component Cross_Bridges (dimensionless)'); LEGEND_RATES(:,1) = strpad('d/dt V in component membrane (mV)'); LEGEND_RATES(:,3) = strpad('d/dt m in component sodium_current_m_gate (dimensionless)'); LEGEND_RATES(:,4) = strpad('d/dt h in component sodium_current_h_gate (dimensionless)'); LEGEND_RATES(:,5) = strpad('d/dt j in component sodium_current_j_gate (dimensionless)'); LEGEND_RATES(:,7) = strpad('d/dt r in component Ca_independent_transient_outward_K_current_r_gate (dimensionless)'); LEGEND_RATES(:,8) = strpad('d/dt s in component Ca_independent_transient_outward_K_current_s_gate (dimensionless)'); LEGEND_RATES(:,9) = strpad('d/dt s_slow in component Ca_independent_transient_outward_K_current_s_slow_gate (dimensionless)'); LEGEND_RATES(:,10) = strpad('d/dt r_ss in component steady_state_outward_K_current_r_ss_gate (dimensionless)'); LEGEND_RATES(:,11) = strpad('d/dt s_ss in component steady_state_outward_K_current_s_ss_gate (dimensionless)'); LEGEND_RATES(:,12) = strpad('d/dt y in component hyperpolarisation_activated_current_y_gate (dimensionless)'); LEGEND_RATES(:,16) = strpad('d/dt HCO3i in component intracellular_ion_concentrations (mM)'); LEGEND_RATES(:,13) = strpad('d/dt CO2i in component intracellular_ion_concentrations (mM)'); LEGEND_RATES(:,14) = strpad('d/dt pH_i in component intracellular_ion_concentrations (dimensionless)'); LEGEND_RATES(:,2) = strpad('d/dt Na_i in component intracellular_ion_concentrations (mM)'); LEGEND_RATES(:,6) = strpad('d/dt K_i in component intracellular_ion_concentrations (mM)'); LEGEND_RATES(:,15) = strpad('d/dt Cli in component intracellular_ion_concentrations (mM)'); LEGEND_RATES(:,18) = strpad('d/dt Ca_SR in component ionic_concentrations (mM)'); LEGEND_RATES(:,17) = strpad('d/dt Ca_i in component ionic_concentrations (mM)'); LEGEND_RATES(:,19) = strpad('d/dt TRPN in component ionic_concentrations (mM)'); LEGEND_RATES(:,20) = strpad('d/dt z_1 in component z_i (dimensionless)'); LEGEND_RATES(:,21) = strpad('d/dt z_2 in component z_i (dimensionless)'); LEGEND_RATES(:,22) = strpad('d/dt z_3 in component z_i (dimensionless)'); LEGEND_RATES(:,23) = strpad('d/dt z in component tropomyosin (dimensionless)'); LEGEND_RATES(:,24) = strpad('d/dt Q_1 in component Cross_Bridges (dimensionless)'); LEGEND_RATES(:,25) = strpad('d/dt Q_2 in component Cross_Bridges (dimensionless)'); LEGEND_RATES(:,26) = strpad('d/dt Q_3 in component Cross_Bridges (dimensionless)'); LEGEND_STATES = LEGEND_STATES'; LEGEND_ALGEBRAIC = LEGEND_ALGEBRAIC'; LEGEND_RATES = LEGEND_RATES'; LEGEND_CONSTANTS = LEGEND_CONSTANTS'; end function [STATES, CONSTANTS] = initConsts() VOI = 0; CONSTANTS = []; STATES = []; ALGEBRAIC = []; CONSTANTS(:,1) = 0; CONSTANTS(:,2) = 0; CONSTANTS(:,3) = 0; CONSTANTS(:,4) = 2.584e-5; CONSTANTS(:,5) = 2.098e-6; CONSTANTS(:,6) = 75000; CONSTANTS(:,7) = 0.01534; STATES(:,1) = -80.5561112771341; CONSTANTS(:,8) = 8314.5; CONSTANTS(:,9) = 295; CONSTANTS(:,10) = 96487; CONSTANTS(:,11) = 0.0001; CONSTANTS(:,12) = 1000; CONSTANTS(:,13) = 10; CONSTANTS(:,14) = -0.0006; CONSTANTS(:,15) = 1; CONSTANTS(:,16) = 4.1333e-7; CONSTANTS(:,17) = -10; CONSTANTS(:,18) = 1.2e-6; CONSTANTS(:,19) = 0.0008; STATES(:,2) = 10.9735342589175; CONSTANTS(:,20) = 140; STATES(:,3) = 0.00419283833975832; STATES(:,4) = 0.675647510010602; STATES(:,5) = 0.675294627571238; CONSTANTS(:,21) = 3.5e-5; CONSTANTS(:,22) = 0.583; CONSTANTS(:,23) = 0.417; CONSTANTS(:,24) = 5.4; STATES(:,6) = 142.021261491871; STATES(:,7) = 0.00218107055088884; STATES(:,8) = 0.922573773425153; STATES(:,9) = 0.530207467628341; CONSTANTS(:,25) = 7e-6; STATES(:,10) = 0.00289374682707489; STATES(:,11) = 0.308572839431787; CONSTANTS(:,26) = 2.4e-5; CONSTANTS(:,27) = 1.45e-6; CONSTANTS(:,28) = 0.2; STATES(:,12) = 0.00331726547133295; CONSTANTS(:,29) = 8.015e-8; CONSTANTS(:,30) = 1.38e-7; CONSTANTS(:,31) = 0; CONSTANTS(:,32) = 0; CONSTANTS(:,33) = 9.5e-5; CONSTANTS(:,34) = 1.5; CONSTANTS(:,35) = 10; CONSTANTS(:,36) = 5.8e-5; STATES(:,13) = 1.23610845162584; STATES(:,14) = 7.20905044774657; CONSTANTS(:,37) = 7.4; CONSTANTS(:,38) = 21.4935205515214; CONSTANTS(:,39) = 1.77948608115949e-7; CONSTANTS(:,40) = 0.51156085723193; CONSTANTS(:,41) = 0.14069285629105; CONSTANTS(:,42) = 0.001698; CONSTANTS(:,43) = 0.000416869383470335; CONSTANTS(:,44) = 2; CONSTANTS(:,45) = 0.35; CONSTANTS(:,46) = 126; STATES(:,15) = 16.2285651746901; CONSTANTS(:,47) = 17970.36; CONSTANTS(:,48) = 0.0008907; CONSTANTS(:,49) = 14975.6; CONSTANTS(:,50) = 257.4; CONSTANTS(:,51) = 4084.9; CONSTANTS(:,52) = 0.35; STATES(:,16) = 15.1428688811927; CONSTANTS(:,53) = 4866.11; CONSTANTS(:,54) = 0.008017; CONSTANTS(:,55) = 4677; CONSTANTS(:,56) = 777.92; CONSTANTS(:,57) = 6.656; CONSTANTS(:,58) = 0.000183; CONSTANTS(:,59) = 2.91; CONSTANTS(:,60) = 6.53e-5; CONSTANTS(:,61) = 2.18; CONSTANTS(:,62) = 0.35; CONSTANTS(:,63) = 983.5; CONSTANTS(:,64) = 110.64; CONSTANTS(:,65) = 20789.9; CONSTANTS(:,66) = 21118.2; CONSTANTS(:,67) = 21256.54; CONSTANTS(:,68) = 2.67e-5; CONSTANTS(:,69) = 5.11; CONSTANTS(:,70) = 0.000312; CONSTANTS(:,71) = 1.44; CONSTANTS(:,72) = 0.35; CONSTANTS(:,73) = 0.05; CONSTANTS(:,74) = 0.03253; CONSTANTS(:,75) = 760; CONSTANTS(:,76) = 0.000365; CONSTANTS(:,77) = 0.481; CONSTANTS(:,78) = 6.40013149605198; CONSTANTS(:,79) = 31.2044223705215; CONSTANTS(:,80) = 7.48048792987277; CONSTANTS(:,81) = 6.84513535697271; CONSTANTS(:,82) = 1; CONSTANTS(:,83) = 2e-5; CONSTANTS(:,84) = 4e-6; CONSTANTS(:,85) = 0; CONSTANTS(:,86) = 2; CONSTANTS(:,87) = 3.5e-6; CONSTANTS(:,88) = 0.0005; STATES(:,17) = 8.60587059887361e-5; CONSTANTS(:,89) = 0.075; CONSTANTS(:,90) = 2.4216e-8; CONSTANTS(:,91) = 87.5; CONSTANTS(:,92) = 1.38; CONSTANTS(:,93) = 0.35; CONSTANTS(:,94) = 0.1; CONSTANTS(:,95) = 0.0385; CONSTANTS(:,96) = 0.00045; CONSTANTS(:,97) = 0.0005; STATES(:,18) = 0.843733859307907; STATES(:,19) = 0.0670845085340179; CONSTANTS(:,98) = 0.05; CONSTANTS(:,99) = 0.00238; CONSTANTS(:,100) = 5.2e-6; CONSTANTS(:,101) = 0.07; CONSTANTS(:,102) = 6.5e-11; CONSTANTS(:,103) = 2e-11; CONSTANTS(:,104) = 9.13e-13; CONSTANTS(:,105) = -2; CONSTANTS(:,106) = 7; CONSTANTS(:,107) = 1; CONSTANTS(:,108) = 0.0625; CONSTANTS(:,109) = 14; CONSTANTS(:,110) = 650; CONSTANTS(:,111) = 0.00022; CONSTANTS(:,112) = 2.35; CONSTANTS(:,113) = 0.05; CONSTANTS(:,114) = 2.43; CONSTANTS(:,115) = 0.012; CONSTANTS(:,116) = 0.041; CONSTANTS(:,117) = 0.01; CONSTANTS(:,118) = 100; STATES(:,20) = 0.988955429362334; STATES(:,21) = 0.00860686643357905; STATES(:,22) = 0.00241692704700704; CONSTANTS(:,119) = 100; CONSTANTS(:,120) = 0.2; CONSTANTS(:,121) = 2; CONSTANTS(:,122) = 0.07; CONSTANTS(:,123) = 56.2; STATES(:,23) = 0.0175189833295748; CONSTANTS(:,124) = 0.008; CONSTANTS(:,125) = 0.002; CONSTANTS(:,126) = 0.00175; CONSTANTS(:,127) = 3; CONSTANTS(:,128) = 0.15; CONSTANTS(:,129) = 3; CONSTANTS(:,130) = 0.00105; CONSTANTS(:,131) = 0.85; CONSTANTS(:,132) = -4; CONSTANTS(:,133) = 4.9; CONSTANTS(:,134) = 0.35; STATES(:,24) = 0; STATES(:,25) = 0; STATES(:,26) = 0; CONSTANTS(:,135) = -29; CONSTANTS(:,136) = 138; CONSTANTS(:,137) = 129; CONSTANTS(:,138) = 0.03; CONSTANTS(:,139) = 0.13; CONSTANTS(:,140) = 0.625; CONSTANTS(:,141) = CONSTANTS(:,7)./CONSTANTS(:,4); CONSTANTS(:,142) = piecewise({CONSTANTS(:,3)==1.00000, (CONSTANTS(:,15) - 1.00000).*10.0000 }, 0.00000); CONSTANTS(:,143) = - (CONSTANTS(:,17)+85.0000)./(CONSTANTS(:,17) - 65.0000); CONSTANTS(:,144) = piecewise({CONSTANTS(:,3)==1.00000, 0.700000+ (CONSTANTS(:,15) - 1.00000).*3.00000 }, 0.700000); CONSTANTS(:,145) = 1.33000.*CONSTANTS(:,19); CONSTANTS(:,146) = 0.464700.*CONSTANTS(:,21); CONSTANTS(:,147) = 2100.00; CONSTANTS(:,148) = 1.00000 - CONSTANTS(:,28); CONSTANTS(:,149) = (exp(CONSTANTS(:,20)./67.3000) - 1.00000)./7.00000; CONSTANTS(:,150) = CONSTANTS(:,11)./CONSTANTS(:,7); CONSTANTS(:,151) = 1000.00.*power(10.0000, - CONSTANTS(:,37)); CONSTANTS(:,152) = power(CONSTANTS(:,20), 3.00000); CONSTANTS(:,153) = 1.17000.*CONSTANTS(:,107); CONSTANTS(:,154) = piecewise({CONSTANTS(:,15)>0.800000&CONSTANTS(:,15)<=1.15000, CONSTANTS(:,15) , CONSTANTS(:,15)>1.15000, 1.15000 }, 0.800000); CONSTANTS(:,155) = 0.00000; CONSTANTS(:,156) = CONSTANTS(:,15); CONSTANTS(:,157) = piecewise({CONSTANTS(:,2)==1.00000, 1.00000 - 2.80400.*(CONSTANTS(:,15) - 1.00000) }, 1.00000); CONSTANTS(:,158) = CONSTANTS(:,112)./CONSTANTS(:,107); CONSTANTS(:,159) = (( CONSTANTS(:,126).*power(CONSTANTS(:,131), CONSTANTS(:,127)))./(power(CONSTANTS(:,131), CONSTANTS(:,127))+power(CONSTANTS(:,128), CONSTANTS(:,127)))).*(1.00000 - ( CONSTANTS(:,127).*power(CONSTANTS(:,128), CONSTANTS(:,127)))./(power(CONSTANTS(:,131), CONSTANTS(:,127))+power(CONSTANTS(:,128), CONSTANTS(:,127)))); CONSTANTS(:,160) = 1.00000+ CONSTANTS(:,133).*(CONSTANTS(:,154) - 1.00000); CONSTANTS(:,161) = CONSTANTS(:,43).*CONSTANTS(:,157); CONSTANTS(:,162) = piecewise({CONSTANTS(:,1)==1.00000, 1.00000+ 22.4100.*(CONSTANTS(:,15) - 1.00000) }, 1.00000); CONSTANTS(:,163) = ( CONSTANTS(:,126).*power(CONSTANTS(:,131), CONSTANTS(:,127) - 1.00000).*CONSTANTS(:,127).*power(CONSTANTS(:,128), CONSTANTS(:,127)))./power(power(CONSTANTS(:,131), CONSTANTS(:,127))+power(CONSTANTS(:,128), CONSTANTS(:,127)), 2.00000); CONSTANTS(:,164) = ( CONSTANTS(:,40).*CONSTANTS(:,42))./CONSTANTS(:,41); CONSTANTS(:,165) = CONSTANTS(:,113).*CONSTANTS(:,162); CONSTANTS(:,166) = CONSTANTS(:,130).*(1.00000+ CONSTANTS(:,132).*(CONSTANTS(:,154) - 1.00000)); CONSTANTS(:,167) = power(10.0000, - CONSTANTS(:,37)).*1000.00; CONSTANTS(:,168) = CONSTANTS(:,165)./CONSTANTS(:,153); CONSTANTS(:,169) = ( CONSTANTS(:,166).*CONSTANTS(:,122))./(CONSTANTS(:,166)+ (CONSTANTS(:,120)./CONSTANTS(:,119)).*(1.00000 - ( (1.00000+ CONSTANTS(:,133).*(CONSTANTS(:,154) - 1.00000)).*0.500000)./CONSTANTS(:,121))); CONSTANTS(:,170) = ( CONSTANTS(:,39).*CONSTANTS(:,20).*CONSTANTS(:,40))./( CONSTANTS(:,38).*CONSTANTS(:,39)+ CONSTANTS(:,39).*CONSTANTS(:,20)+ CONSTANTS(:,20).*CONSTANTS(:,167)+ CONSTANTS(:,38).*CONSTANTS(:,167)); CONSTANTS(:,171) = (CONSTANTS(:,124)./power(CONSTANTS(:,169)./CONSTANTS(:,122), CONSTANTS(:,129)) - CONSTANTS(:,159))./(CONSTANTS(:,125)+CONSTANTS(:,163)+CONSTANTS(:,124)./power(CONSTANTS(:,169)./CONSTANTS(:,122), CONSTANTS(:,129))); CONSTANTS(:,172) = ( CONSTANTS(:,38).*CONSTANTS(:,167).*CONSTANTS(:,164))./( CONSTANTS(:,38).*CONSTANTS(:,39)+ CONSTANTS(:,39).*CONSTANTS(:,20)+ CONSTANTS(:,20).*CONSTANTS(:,167)+ CONSTANTS(:,38).*CONSTANTS(:,167)); CONSTANTS(:,173) = ( CONSTANTS(:,51).*CONSTANTS(:,50))./CONSTANTS(:,49); CONSTANTS(:,174) = 1000.00.*power(10.0000, - 14.0000+CONSTANTS(:,37)); CONSTANTS(:,175) = 1.00000+CONSTANTS(:,48)./CONSTANTS(:,174)+( CONSTANTS(:,48).*CONSTANTS(:,46))./( CONSTANTS(:,174).*CONSTANTS(:,47)); CONSTANTS(:,176) = 1.00000+CONSTANTS(:,47)./CONSTANTS(:,46)+( CONSTANTS(:,47).*CONSTANTS(:,174))./( CONSTANTS(:,46).*CONSTANTS(:,48)); CONSTANTS(:,177) = ( CONSTANTS(:,57).*CONSTANTS(:,56))./CONSTANTS(:,55); CONSTANTS(:,178) = 1000.00.*power(10.0000, - CONSTANTS(:,37)); CONSTANTS(:,179) = piecewise({CONSTANTS(:,2)==1.00000, 1.00000+ 2.50000.*(CONSTANTS(:,15) - 1.00000) }, 1.00000); CONSTANTS(:,180) = CONSTANTS(:,68).*CONSTANTS(:,179); CONSTANTS(:,181) = ( CONSTANTS(:,67).*CONSTANTS(:,66))./CONSTANTS(:,65); CONSTANTS(:,182) = 1000.00.*power(10.0000, - CONSTANTS(:,37)); CONSTANTS(:,183) = CONSTANTS(:,73).*CONSTANTS(:,74).*CONSTANTS(:,75); CONSTANTS(:,184) = ( (CONSTANTS(:,76)./CONSTANTS(:,77)).*CONSTANTS(:,183))./( power(10.0000, - CONSTANTS(:,37)).*1000.00); CONSTANTS(:,185) = 1.00000+CONSTANTS(:,20)./CONSTANTS(:,53)+( CONSTANTS(:,20).*CONSTANTS(:,184))./( CONSTANTS(:,53).*CONSTANTS(:,54)); CONSTANTS(:,186) = 1.00000+CONSTANTS(:,54)./CONSTANTS(:,184)+( CONSTANTS(:,53).*CONSTANTS(:,54))./( CONSTANTS(:,184).*CONSTANTS(:,20)); CONSTANTS(:,187) = 1.00000+CONSTANTS(:,64)./CONSTANTS(:,184)+( CONSTANTS(:,64).*CONSTANTS(:,46))./( CONSTANTS(:,184).*CONSTANTS(:,63)); CONSTANTS(:,188) = 1.00000+CONSTANTS(:,63)./CONSTANTS(:,46)+( CONSTANTS(:,63).*CONSTANTS(:,184))./( CONSTANTS(:,46).*CONSTANTS(:,64)); if (isempty(STATES)), warning('Initial values for states not set');, end end function [RATES, ALGEBRAIC] = computeRates(VOI, STATES, CONSTANTS) global algebraicVariableCount; statesSize = size(STATES); statesColumnCount = statesSize(2); if ( statesColumnCount == 1) STATES = STATES'; ALGEBRAIC = zeros(1, algebraicVariableCount); utilOnes = 1; else statesRowCount = statesSize(1); ALGEBRAIC = zeros(statesRowCount, algebraicVariableCount); RATES = zeros(statesRowCount, statesColumnCount); utilOnes = ones(statesRowCount, 1); end RATES(:,24) = CONSTANTS(:,135).*CONSTANTS(:,155) - CONSTANTS(:,138).*STATES(:,24); RATES(:,25) = CONSTANTS(:,136).*CONSTANTS(:,155) - CONSTANTS(:,139).*STATES(:,25); RATES(:,26) = CONSTANTS(:,137).*CONSTANTS(:,155) - CONSTANTS(:,140).*STATES(:,26); ALGEBRAIC(:,8) = 1.00000./(1.00000+exp((STATES(:,1)+87.5000)./10.3000)); RATES(:,11) = (ALGEBRAIC(:,8) - STATES(:,11))./CONSTANTS(:,147); ALGEBRAIC(:,1) = 1.00000./(1.00000+exp((STATES(:,1)+45.0000)./ - 6.50000)); ALGEBRAIC(:,13) = 1.36000./(( 0.320000.*(STATES(:,1)+47.1300))./(1.00000 - exp( - 0.100000.*(STATES(:,1)+47.1300)))+ 0.0800000.*exp( - STATES(:,1)./11.0000)); RATES(:,3) = (ALGEBRAIC(:,1) - STATES(:,3))./ALGEBRAIC(:,13); ALGEBRAIC(:,2) = 1.00000./(1.00000+exp((STATES(:,1)+76.1000)./6.07000)); ALGEBRAIC(:,14) = piecewise({STATES(:,1)>= - 40.0000, 0.453700.*(1.00000+exp( - (STATES(:,1)+10.6600)./11.1000)) }, 3.49000./( 0.135000.*exp( - (STATES(:,1)+80.0000)./6.80000)+ 3.56000.*exp( 0.0790000.*STATES(:,1))+ 310000..*exp( 0.350000.*STATES(:,1)))); RATES(:,4) = (ALGEBRAIC(:,2) - STATES(:,4))./ALGEBRAIC(:,14); ALGEBRAIC(:,3) = 1.00000./(1.00000+exp((STATES(:,1)+76.1000)./6.07000)); ALGEBRAIC(:,15) = piecewise({STATES(:,1)>= - 40.0000, ( 11.6300.*(1.00000+exp( - 0.100000.*(STATES(:,1)+32.0000))))./exp( - 2.53500e-07.*STATES(:,1)) }, 3.49000./( ((STATES(:,1)+37.7800)./(1.00000+exp( 0.311000.*(STATES(:,1)+79.2300)))).*( - 127140..*exp( 0.244400.*STATES(:,1)) - 3.47400e-05.*exp( - 0.0439100.*STATES(:,1)))+( 0.121200.*exp( - 0.0105200.*STATES(:,1)))./(1.00000+exp( - 0.137800.*(STATES(:,1)+40.1400))))); RATES(:,5) = (ALGEBRAIC(:,3) - STATES(:,5))./ALGEBRAIC(:,15); ALGEBRAIC(:,16) = 1000.00./( 45.1600.*exp( 0.0357700.*(STATES(:,1)+50.0000))+ 98.9000.*exp( - 0.100000.*(STATES(:,1)+38.0000))); ALGEBRAIC(:,4) = 1.00000./(1.00000+exp((STATES(:,1)+10.6000)./ - 11.4200)); RATES(:,7) = (ALGEBRAIC(:,4) - STATES(:,7))./ALGEBRAIC(:,16); ALGEBRAIC(:,17) = 550.000.*exp( - power((STATES(:,1)+70.0000)./25.0000, 2.00000))+49.0000; ALGEBRAIC(:,5) = 1.00000./(1.00000+exp((STATES(:,1)+45.3000)./6.88410)); RATES(:,8) = (ALGEBRAIC(:,5) - STATES(:,8))./ALGEBRAIC(:,17); ALGEBRAIC(:,18) = 3300.00.*exp( - power((STATES(:,1)+70.0000)./30.0000, 2.00000))+49.0000; ALGEBRAIC(:,6) = 1.00000./(1.00000+exp((STATES(:,1)+45.3000)./6.88410)); RATES(:,9) = (ALGEBRAIC(:,6) - STATES(:,9))./ALGEBRAIC(:,18); ALGEBRAIC(:,19) = 10000.0./( 45.1600.*exp( 0.0357700.*(STATES(:,1)+50.0000))+ 98.9000.*exp( - 0.100000.*(STATES(:,1)+38.0000))); ALGEBRAIC(:,7) = 1.00000./(1.00000+exp((STATES(:,1)+11.5000)./ - 11.8200)); RATES(:,10) = (ALGEBRAIC(:,7) - STATES(:,10))./ALGEBRAIC(:,19); ALGEBRAIC(:,20) = 1000.00./( 0.118850.*exp((STATES(:,1)+80.0000)./28.3700)+ 0.562300.*exp((STATES(:,1)+80.0000)./ - 14.1900)); ALGEBRAIC(:,9) = 1.00000./(1.00000+exp((STATES(:,1)+138.600)./10.4800)); RATES(:,12) = (ALGEBRAIC(:,9) - STATES(:,12))./ALGEBRAIC(:,20); ALGEBRAIC(:,11) = CONSTANTS(:,101) - STATES(:,19); ALGEBRAIC(:,22) = CONSTANTS(:,124).*power(ALGEBRAIC(:,11)./CONSTANTS(:,169), CONSTANTS(:,129)); ALGEBRAIC(:,24) = CONSTANTS(:,125)+( CONSTANTS(:,126).*power(STATES(:,23), CONSTANTS(:,127) - 1.00000))./(power(STATES(:,23), CONSTANTS(:,127))+power(CONSTANTS(:,128), CONSTANTS(:,127))); RATES(:,23) = ALGEBRAIC(:,22).*(1.00000 - STATES(:,23)) - ALGEBRAIC(:,24).*STATES(:,23); ALGEBRAIC(:,26) = (( CONSTANTS(:,8).*CONSTANTS(:,9))./CONSTANTS(:,10)).*log(CONSTANTS(:,24)./STATES(:,6)); ALGEBRAIC(:,31) = ( CONSTANTS(:,146).*STATES(:,7).*( CONSTANTS(:,22).*STATES(:,8)+ CONSTANTS(:,23).*STATES(:,9)).*(STATES(:,1) - ALGEBRAIC(:,26)))./CONSTANTS(:,7); ALGEBRAIC(:,32) = ( CONSTANTS(:,25).*STATES(:,10).*STATES(:,11).*(STATES(:,1) - ALGEBRAIC(:,26)))./CONSTANTS(:,7); ALGEBRAIC(:,33) = (( (0.0480000./(exp((STATES(:,1)+37.0000)./25.0000)+exp((STATES(:,1)+37.0000)./ - 25.0000))+0.0100000).*0.00100000)./(1.00000+exp((STATES(:,1) - (ALGEBRAIC(:,26)+76.7700))./ - 17.0000))+( CONSTANTS(:,26).*(STATES(:,1) - (ALGEBRAIC(:,26)+1.73000)))./( (1.00000+exp(( 1.61300.*CONSTANTS(:,10).*(STATES(:,1) - (ALGEBRAIC(:,26)+1.73000)))./( CONSTANTS(:,8).*CONSTANTS(:,9)))).*(1.00000+exp((CONSTANTS(:,24) - 0.998800)./ - 0.124000))))./CONSTANTS(:,7); ALGEBRAIC(:,40) = 1.00000./(1.00000+power(CONSTANTS(:,35)./STATES(:,2), 4.00000)); ALGEBRAIC(:,41) = 1.00000./(1.00000+ 0.124500.*exp(( - 0.100000.*STATES(:,1).*CONSTANTS(:,10))./( CONSTANTS(:,8).*CONSTANTS(:,9)))+ 0.0365000.*CONSTANTS(:,149).*exp(( - STATES(:,1).*CONSTANTS(:,10))./( CONSTANTS(:,8).*CONSTANTS(:,9)))); ALGEBRAIC(:,42) = (( (CONSTANTS(:,33)./CONSTANTS(:,7)).*ALGEBRAIC(:,41).*CONSTANTS(:,24))./(CONSTANTS(:,24)+CONSTANTS(:,34))).*ALGEBRAIC(:,40); ALGEBRAIC(:,10) = piecewise({VOI - floor(VOI./CONSTANTS(:,12)).*CONSTANTS(:,12)>=0.00000&VOI - floor(VOI./CONSTANTS(:,12)).*CONSTANTS(:,12)<=CONSTANTS(:,13), CONSTANTS(:,14)./CONSTANTS(:,7) }, 0.00000); ALGEBRAIC(:,39) = ( CONSTANTS(:,32).*CONSTANTS(:,30).*(STATES(:,1) - ALGEBRAIC(:,26)))./CONSTANTS(:,7); ALGEBRAIC(:,28) = ( CONSTANTS(:,16).*CONSTANTS(:,142).*(STATES(:,1) - ALGEBRAIC(:,26)))./CONSTANTS(:,7); ALGEBRAIC(:,30) = ( (CONSTANTS(:,18)./(1.00000+exp( - (10.0000+STATES(:,1))./45.0000))).*(STATES(:,1) - ALGEBRAIC(:,26)).*CONSTANTS(:,144))./CONSTANTS(:,7); ALGEBRAIC(:,35) = ( CONSTANTS(:,27).*STATES(:,12).*CONSTANTS(:,148).*(STATES(:,1) - ALGEBRAIC(:,26)))./CONSTANTS(:,7); RATES(:,6) = ( - (((ALGEBRAIC(:,10)+ALGEBRAIC(:,28)+ALGEBRAIC(:,32)+ALGEBRAIC(:,30)+ALGEBRAIC(:,31)+ALGEBRAIC(:,33)+ALGEBRAIC(:,35)) - 2.00000.*ALGEBRAIC(:,42))+ALGEBRAIC(:,39)).*CONSTANTS(:,7))./( CONSTANTS(:,4).*CONSTANTS(:,10)); ALGEBRAIC(:,73) = (( CONSTANTS(:,8).*CONSTANTS(:,9))./CONSTANTS(:,10)).*log(STATES(:,15)./CONSTANTS(:,46)); ALGEBRAIC(:,74) = CONSTANTS(:,83).*(STATES(:,1) - ALGEBRAIC(:,73)); ALGEBRAIC(:,53) = 1000.00.*power(10.0000, - 14.0000+STATES(:,14)); ALGEBRAIC(:,54) = 1.00000+CONSTANTS(:,47)./STATES(:,15)+( CONSTANTS(:,47).*ALGEBRAIC(:,53))./( STATES(:,15).*CONSTANTS(:,48)); ALGEBRAIC(:,55) = 1.00000+CONSTANTS(:,48)./ALGEBRAIC(:,53)+( CONSTANTS(:,48).*STATES(:,15))./( ALGEBRAIC(:,53).*CONSTANTS(:,47)); ALGEBRAIC(:,56) = 1.00000./(CONSTANTS(:,175)+( ALGEBRAIC(:,55).*(CONSTANTS(:,49)+( CONSTANTS(:,51).*CONSTANTS(:,175))./CONSTANTS(:,176)))./(CONSTANTS(:,50)+( CONSTANTS(:,173).*ALGEBRAIC(:,55))./ALGEBRAIC(:,54))); ALGEBRAIC(:,57) = 1.00000./(ALGEBRAIC(:,55)+( CONSTANTS(:,175).*(CONSTANTS(:,50)+( CONSTANTS(:,173).*ALGEBRAIC(:,55))./ALGEBRAIC(:,54)))./(CONSTANTS(:,49)+( CONSTANTS(:,51).*CONSTANTS(:,175))./CONSTANTS(:,176))); ALGEBRAIC(:,58) = (( CONSTANTS(:,4).*( CONSTANTS(:,50).*ALGEBRAIC(:,57) - CONSTANTS(:,49).*ALGEBRAIC(:,56)))./( 60.0000.*1000.00)).*CONSTANTS(:,52); ALGEBRAIC(:,67) = 1.00000+CONSTANTS(:,63)./STATES(:,15)+( CONSTANTS(:,63).*STATES(:,16))./( STATES(:,15).*CONSTANTS(:,64)); ALGEBRAIC(:,68) = 1.00000+CONSTANTS(:,64)./STATES(:,16)+( CONSTANTS(:,64).*STATES(:,15))./( STATES(:,16).*CONSTANTS(:,63)); ALGEBRAIC(:,69) = 1.00000./(CONSTANTS(:,187)+( ALGEBRAIC(:,68).*(CONSTANTS(:,65)+( CONSTANTS(:,67).*CONSTANTS(:,187))./CONSTANTS(:,188)))./(CONSTANTS(:,66)+( CONSTANTS(:,181).*ALGEBRAIC(:,68))./ALGEBRAIC(:,67))); ALGEBRAIC(:,70) = 1.00000./(ALGEBRAIC(:,68)+( CONSTANTS(:,187).*(CONSTANTS(:,66)+( CONSTANTS(:,181).*ALGEBRAIC(:,68))./ALGEBRAIC(:,67)))./(CONSTANTS(:,65)+( CONSTANTS(:,67).*CONSTANTS(:,187))./CONSTANTS(:,188))); ALGEBRAIC(:,66) = 1000.00.*power(10.0000, - STATES(:,14)); ALGEBRAIC(:,71) = ( (power(CONSTANTS(:,180), CONSTANTS(:,69))./(power(ALGEBRAIC(:,66), CONSTANTS(:,69))+power(CONSTANTS(:,180), CONSTANTS(:,69)))).*power(CONSTANTS(:,182), CONSTANTS(:,71)))./(power(CONSTANTS(:,182), CONSTANTS(:,71))+power(CONSTANTS(:,70), CONSTANTS(:,71))); ALGEBRAIC(:,72) = (( CONSTANTS(:,4).*ALGEBRAIC(:,71).*( CONSTANTS(:,66).*ALGEBRAIC(:,70) - CONSTANTS(:,65).*ALGEBRAIC(:,69)))./( 60.0000.*1000.00)).*CONSTANTS(:,72); RATES(:,15) = ( ALGEBRAIC(:,74).*CONSTANTS(:,7))./( CONSTANTS(:,4).*CONSTANTS(:,10))+( CONSTANTS(:,82).*(ALGEBRAIC(:,58)+ALGEBRAIC(:,72)))./CONSTANTS(:,4); ALGEBRAIC(:,59) = 1.00000+CONSTANTS(:,54)./STATES(:,16)+( CONSTANTS(:,53).*CONSTANTS(:,54))./( STATES(:,16).*STATES(:,2)); ALGEBRAIC(:,60) = 1.00000+STATES(:,2)./CONSTANTS(:,53)+( STATES(:,2).*STATES(:,16))./( CONSTANTS(:,53).*CONSTANTS(:,54)); ALGEBRAIC(:,62) = 1.00000./(CONSTANTS(:,185)+( ALGEBRAIC(:,60).*(CONSTANTS(:,55)+( CONSTANTS(:,57).*CONSTANTS(:,185))./CONSTANTS(:,186)))./(CONSTANTS(:,56)+( CONSTANTS(:,177).*ALGEBRAIC(:,60))./ALGEBRAIC(:,59))); ALGEBRAIC(:,63) = 1.00000./(ALGEBRAIC(:,60)+( CONSTANTS(:,185).*(CONSTANTS(:,56)+( CONSTANTS(:,177).*ALGEBRAIC(:,60))./ALGEBRAIC(:,59)))./(CONSTANTS(:,55)+( CONSTANTS(:,57).*CONSTANTS(:,185))./CONSTANTS(:,186))); ALGEBRAIC(:,61) = 1000.00.*power(10.0000, - STATES(:,14)); ALGEBRAIC(:,64) = (power(ALGEBRAIC(:,61), CONSTANTS(:,59))./(power(ALGEBRAIC(:,61), CONSTANTS(:,59))+power(CONSTANTS(:,58), CONSTANTS(:,59)))).*(1.00000 - power(CONSTANTS(:,178), CONSTANTS(:,61))./(power(CONSTANTS(:,178), CONSTANTS(:,61))+power(CONSTANTS(:,60), CONSTANTS(:,61)))); ALGEBRAIC(:,65) = (( CONSTANTS(:,4).*ALGEBRAIC(:,64).*( CONSTANTS(:,56).*ALGEBRAIC(:,63) - CONSTANTS(:,55).*ALGEBRAIC(:,62)))./( 60.0000.*1000.00)).*CONSTANTS(:,62); ALGEBRAIC(:,80) = (CONSTANTS(:,4)+CONSTANTS(:,5)).*( CONSTANTS(:,76).*STATES(:,13) - CONSTANTS(:,77).*STATES(:,16).*power(10.0000, - STATES(:,14)).*1000.00); RATES(:,16) = ALGEBRAIC(:,80)./(CONSTANTS(:,4)+CONSTANTS(:,5))+(ALGEBRAIC(:,65) - ALGEBRAIC(:,72))./CONSTANTS(:,4); ALGEBRAIC(:,43) = CONSTANTS(:,4).*CONSTANTS(:,141).*CONSTANTS(:,36).*(CONSTANTS(:,183) - STATES(:,13)); RATES(:,13) = (ALGEBRAIC(:,43)./CONSTANTS(:,4) - ALGEBRAIC(:,80)./(CONSTANTS(:,4)+CONSTANTS(:,5)))+CONSTANTS(:,85); ALGEBRAIC(:,75) = 1000.00.*power(10.0000, - STATES(:,14)); ALGEBRAIC(:,76) = (( CONSTANTS(:,8).*CONSTANTS(:,9))./CONSTANTS(:,10)).*log(CONSTANTS(:,151)./ALGEBRAIC(:,75)); ALGEBRAIC(:,77) = CONSTANTS(:,84).*(STATES(:,1) - ALGEBRAIC(:,76)); ALGEBRAIC(:,47) = power(10.0000, - STATES(:,14)).*1000.00; ALGEBRAIC(:,48) = ( CONSTANTS(:,39).*STATES(:,2).*CONSTANTS(:,41))./( CONSTANTS(:,38).*CONSTANTS(:,39)+ CONSTANTS(:,39).*STATES(:,2)+ STATES(:,2).*ALGEBRAIC(:,47)+ CONSTANTS(:,38).*ALGEBRAIC(:,47)); ALGEBRAIC(:,49) = ( CONSTANTS(:,38).*ALGEBRAIC(:,47).*CONSTANTS(:,42))./( CONSTANTS(:,38).*CONSTANTS(:,39)+ CONSTANTS(:,39).*STATES(:,2)+ STATES(:,2).*ALGEBRAIC(:,47)+ CONSTANTS(:,38).*ALGEBRAIC(:,47)); ALGEBRAIC(:,50) = power(ALGEBRAIC(:,47), CONSTANTS(:,44))./(power(ALGEBRAIC(:,47), CONSTANTS(:,44))+power(CONSTANTS(:,161), CONSTANTS(:,44))); ALGEBRAIC(:,51) = ( ALGEBRAIC(:,50).*( CONSTANTS(:,170).*ALGEBRAIC(:,49) - ALGEBRAIC(:,48).*CONSTANTS(:,172)))./(CONSTANTS(:,170)+ALGEBRAIC(:,49)+ALGEBRAIC(:,48)+CONSTANTS(:,172)); ALGEBRAIC(:,52) = ALGEBRAIC(:,51).*CONSTANTS(:,4).*CONSTANTS(:,45); ALGEBRAIC(:,78) = log(10.0000).*(power(10.0000, - STATES(:,14))+( power(10.0000, STATES(:,14)+CONSTANTS(:,78)).*CONSTANTS(:,79))./power(power(10.0000, STATES(:,14))+power(10.0000, CONSTANTS(:,78)), 2.00000)+( power(10.0000, STATES(:,14)+CONSTANTS(:,80)).*CONSTANTS(:,81))./power(power(10.0000, STATES(:,14))+power(10.0000, CONSTANTS(:,80)), 2.00000)); RATES(:,14) = (1.00000./ - ALGEBRAIC(:,78)).*((( - ALGEBRAIC(:,52)+ALGEBRAIC(:,58))./CONSTANTS(:,4)+ALGEBRAIC(:,80)./(CONSTANTS(:,4)+CONSTANTS(:,5))) - ( ALGEBRAIC(:,77).*CONSTANTS(:,7))./( CONSTANTS(:,4).*CONSTANTS(:,10))); ALGEBRAIC(:,21) = (( CONSTANTS(:,8).*CONSTANTS(:,9))./CONSTANTS(:,10)).*log(CONSTANTS(:,20)./STATES(:,2)); ALGEBRAIC(:,25) = ( CONSTANTS(:,145).*power(STATES(:,3), 3.00000).*STATES(:,4).*STATES(:,5).*(STATES(:,1) - ALGEBRAIC(:,21)))./CONSTANTS(:,7); ALGEBRAIC(:,85) = exp( CONSTANTS(:,89).*0.500000.*STATES(:,1).*CONSTANTS(:,93)); ALGEBRAIC(:,86) = exp( CONSTANTS(:,89).*0.500000.*STATES(:,1).*(CONSTANTS(:,93) - 1.00000)); ALGEBRAIC(:,87) = power(STATES(:,2), 3.00000); ALGEBRAIC(:,88) = ( (( (CONSTANTS(:,95)./( (CONSTANTS(:,152)+power(CONSTANTS(:,91), 3.00000)).*(CONSTANTS(:,86)+CONSTANTS(:,92)))).*( ALGEBRAIC(:,85).*ALGEBRAIC(:,87).*CONSTANTS(:,86) - ALGEBRAIC(:,86).*CONSTANTS(:,152).*STATES(:,17)))./(1.00000+ CONSTANTS(:,94).*ALGEBRAIC(:,86))).*CONSTANTS(:,4).*CONSTANTS(:,10))./CONSTANTS(:,7); ALGEBRAIC(:,38) = ( CONSTANTS(:,31).*CONSTANTS(:,29).*(STATES(:,1) - ALGEBRAIC(:,21)))./CONSTANTS(:,7); ALGEBRAIC(:,23) = (( CONSTANTS(:,16).*CONSTANTS(:,142).*(STATES(:,1) - ALGEBRAIC(:,21)))./CONSTANTS(:,7)).*CONSTANTS(:,143); ALGEBRAIC(:,34) = ( CONSTANTS(:,27).*STATES(:,12).*CONSTANTS(:,28).*(STATES(:,1) - ALGEBRAIC(:,21)))./CONSTANTS(:,7); RATES(:,2) = ( - (ALGEBRAIC(:,38)+ALGEBRAIC(:,23)+ALGEBRAIC(:,25)+ ALGEBRAIC(:,88).*3.00000+ ALGEBRAIC(:,42).*3.00000+ALGEBRAIC(:,34)).*CONSTANTS(:,7))./( CONSTANTS(:,4).*CONSTANTS(:,10))+(ALGEBRAIC(:,52)+ALGEBRAIC(:,65))./CONSTANTS(:,4); ALGEBRAIC(:,37) = ALGEBRAIC(:,34)+ALGEBRAIC(:,35); ALGEBRAIC(:,93) = CONSTANTS(:,89).*STATES(:,1); ALGEBRAIC(:,94) = exp( - ALGEBRAIC(:,93)); ALGEBRAIC(:,102) = piecewise({abs(ALGEBRAIC(:,93))>1.00000e-05, ( (( CONSTANTS(:,104).*ALGEBRAIC(:,93))./(1.00000 - ALGEBRAIC(:,94))).*(( CONSTANTS(:,86).*ALGEBRAIC(:,94) - STATES(:,17))+ (CONSTANTS(:,103)./CONSTANTS(:,102)).*( CONSTANTS(:,86).*ALGEBRAIC(:,94) - STATES(:,18))))./(1.00000+CONSTANTS(:,103)./CONSTANTS(:,102)+( (CONSTANTS(:,104)./CONSTANTS(:,102)).*ALGEBRAIC(:,93))./(1.00000 - ALGEBRAIC(:,94))) }, ( (( CONSTANTS(:,104).*1.00000e-05)./(1.00000 - exp( - 1.00000e-05))).*(( CONSTANTS(:,86).*exp( - 1.00000e-05) - STATES(:,17))+ (CONSTANTS(:,103)./CONSTANTS(:,102)).*( CONSTANTS(:,86).*exp( - 1.00000e-05) - STATES(:,18))))./(1.00000+CONSTANTS(:,103)./CONSTANTS(:,102)+( (CONSTANTS(:,104)./CONSTANTS(:,102)).*1.00000e-05)./(1.00000 - exp( - 1.00000e-05)))); ALGEBRAIC(:,101) = piecewise({abs(ALGEBRAIC(:,93))>1.00000e-05, ( (( CONSTANTS(:,104).*ALGEBRAIC(:,93))./(1.00000 - ALGEBRAIC(:,94))).*( CONSTANTS(:,86).*ALGEBRAIC(:,94) - STATES(:,17)))./(1.00000+( (CONSTANTS(:,104)./CONSTANTS(:,102)).*ALGEBRAIC(:,93))./(1.00000 - ALGEBRAIC(:,94))) }, ( (( CONSTANTS(:,104).*1.00000e-05)./(1.00000 - exp( - 1.00000e-05))).*( CONSTANTS(:,86).*exp( - 1.00000e-05) - STATES(:,17)))./(1.00000+( (CONSTANTS(:,104)./CONSTANTS(:,102)).*1.00000e-05)./(1.00000 - exp( - 1.00000e-05)))); ALGEBRAIC(:,95) = exp((STATES(:,1) - CONSTANTS(:,105))./CONSTANTS(:,106)); ALGEBRAIC(:,106) = ALGEBRAIC(:,95)./( CONSTANTS(:,107).*(ALGEBRAIC(:,95)+1.00000)); ALGEBRAIC(:,108) = ( (1.00000./CONSTANTS(:,153)).*power(STATES(:,17), 2.00000))./(power(STATES(:,17), 2.00000)+power(CONSTANTS(:,116), 2.00000)); ALGEBRAIC(:,98) = piecewise({abs(ALGEBRAIC(:,93))>1.00000e-09, (STATES(:,17)+( (CONSTANTS(:,104)./CONSTANTS(:,102)).*CONSTANTS(:,86).*ALGEBRAIC(:,93).*ALGEBRAIC(:,94))./(1.00000 - ALGEBRAIC(:,94)))./(1.00000+( (CONSTANTS(:,104)./CONSTANTS(:,102)).*ALGEBRAIC(:,93))./(1.00000 - ALGEBRAIC(:,94))) }, (STATES(:,17)+ (CONSTANTS(:,104)./CONSTANTS(:,102)).*CONSTANTS(:,86))./(1.00000+CONSTANTS(:,104)./CONSTANTS(:,102))); ALGEBRAIC(:,107) = ( (1.00000./CONSTANTS(:,153)).*power(ALGEBRAIC(:,98), 2.00000))./(power(ALGEBRAIC(:,98), 2.00000)+power(CONSTANTS(:,116), 2.00000)); ALGEBRAIC(:,113) = (ALGEBRAIC(:,106)+CONSTANTS(:,158)).*( (CONSTANTS(:,168)+ALGEBRAIC(:,107)+CONSTANTS(:,158)).*(CONSTANTS(:,168)+ALGEBRAIC(:,108))+ ALGEBRAIC(:,106).*(CONSTANTS(:,168)+ALGEBRAIC(:,107))); ALGEBRAIC(:,114) = ( ALGEBRAIC(:,106).*CONSTANTS(:,168).*(ALGEBRAIC(:,106)+CONSTANTS(:,158)+CONSTANTS(:,168)+ALGEBRAIC(:,108)))./ALGEBRAIC(:,113); ALGEBRAIC(:,116) = ( ALGEBRAIC(:,106).*( ALGEBRAIC(:,107).*(ALGEBRAIC(:,106)+CONSTANTS(:,168)+ALGEBRAIC(:,108))+ ALGEBRAIC(:,108).*CONSTANTS(:,158)))./ALGEBRAIC(:,113); ALGEBRAIC(:,122) = ALGEBRAIC(:,102).*ALGEBRAIC(:,116)+ ALGEBRAIC(:,101).*ALGEBRAIC(:,114); ALGEBRAIC(:,124) = ( ALGEBRAIC(:,101).*ALGEBRAIC(:,106))./(ALGEBRAIC(:,106)+CONSTANTS(:,158)); ALGEBRAIC(:,126) = ( ( STATES(:,20).*ALGEBRAIC(:,122)+ STATES(:,21).*ALGEBRAIC(:,124)).*CONSTANTS(:,6))./CONSTANTS(:,4); ALGEBRAIC(:,128) = ( - ALGEBRAIC(:,126).*2.00000.*CONSTANTS(:,4).*CONSTANTS(:,10))./CONSTANTS(:,7); ALGEBRAIC(:,83) = arbitrary_log(CONSTANTS(:,86)./STATES(:,17), 10)./CONSTANTS(:,89); ALGEBRAIC(:,84) = ( CONSTANTS(:,90).*(STATES(:,1) - ALGEBRAIC(:,83)).*2.00000.*CONSTANTS(:,4).*CONSTANTS(:,10))./CONSTANTS(:,7); ALGEBRAIC(:,82) = ( (( CONSTANTS(:,87).*STATES(:,17))./(CONSTANTS(:,88)+STATES(:,17))).*2.00000.*CONSTANTS(:,4).*CONSTANTS(:,10))./CONSTANTS(:,7); RATES(:,1) = - (ALGEBRAIC(:,77)+ALGEBRAIC(:,74)+ALGEBRAIC(:,25)+ALGEBRAIC(:,128)+ALGEBRAIC(:,31)+ALGEBRAIC(:,32)+ALGEBRAIC(:,37)+ALGEBRAIC(:,33)+ALGEBRAIC(:,84)+ALGEBRAIC(:,23)+ALGEBRAIC(:,39)+ALGEBRAIC(:,38)+ALGEBRAIC(:,30)+ALGEBRAIC(:,28)+ALGEBRAIC(:,42)+ALGEBRAIC(:,88)+ALGEBRAIC(:,82)+ALGEBRAIC(:,10))./CONSTANTS(:,150); ALGEBRAIC(:,109) = ( (1.00000./CONSTANTS(:,114)).*(power(ALGEBRAIC(:,98), 2.00000)+ CONSTANTS(:,117).*power(CONSTANTS(:,116), 2.00000)))./(power(ALGEBRAIC(:,98), 2.00000)+power(CONSTANTS(:,116), 2.00000)); ALGEBRAIC(:,110) = ( (1.00000./CONSTANTS(:,114)).*(power(STATES(:,17), 2.00000)+ CONSTANTS(:,117).*power(CONSTANTS(:,116), 2.00000)))./(power(STATES(:,17), 2.00000)+power(CONSTANTS(:,116), 2.00000)); ALGEBRAIC(:,117) = ( CONSTANTS(:,158).*CONSTANTS(:,168).*(CONSTANTS(:,158)+ALGEBRAIC(:,106)+CONSTANTS(:,168)+ALGEBRAIC(:,107)))./ALGEBRAIC(:,113); ALGEBRAIC(:,119) = ALGEBRAIC(:,114).*ALGEBRAIC(:,109)+ ALGEBRAIC(:,117).*ALGEBRAIC(:,110); ALGEBRAIC(:,111) = ( (CONSTANTS(:,115)./CONSTANTS(:,114)).*CONSTANTS(:,118).*(power(ALGEBRAIC(:,98), 2.00000)+ CONSTANTS(:,117).*power(CONSTANTS(:,116), 2.00000)))./( CONSTANTS(:,118).*power(ALGEBRAIC(:,98), 2.00000)+ CONSTANTS(:,117).*power(CONSTANTS(:,116), 2.00000)); ALGEBRAIC(:,112) = ( (CONSTANTS(:,115)./CONSTANTS(:,114)).*CONSTANTS(:,118).*(power(STATES(:,17), 2.00000)+ CONSTANTS(:,117).*power(CONSTANTS(:,116), 2.00000)))./( CONSTANTS(:,118).*power(STATES(:,17), 2.00000)+ CONSTANTS(:,117).*power(CONSTANTS(:,116), 2.00000)); ALGEBRAIC(:,121) = ( ALGEBRAIC(:,106).*ALGEBRAIC(:,111)+ CONSTANTS(:,158).*ALGEBRAIC(:,112))./(ALGEBRAIC(:,106)+CONSTANTS(:,158)); ALGEBRAIC(:,97) = (STATES(:,17)+ (CONSTANTS(:,103)./CONSTANTS(:,102)).*STATES(:,18))./(1.00000+CONSTANTS(:,103)./CONSTANTS(:,102)); ALGEBRAIC(:,103) = ( (( (1.00000./CONSTANTS(:,110)).*ALGEBRAIC(:,97))./CONSTANTS(:,111)).*(ALGEBRAIC(:,95)+CONSTANTS(:,108)))./(ALGEBRAIC(:,95)+1.00000); ALGEBRAIC(:,104) = ( (( (1.00000./CONSTANTS(:,110)).*STATES(:,17))./CONSTANTS(:,111)).*(ALGEBRAIC(:,95)+CONSTANTS(:,108)))./(ALGEBRAIC(:,95)+1.00000); ALGEBRAIC(:,115) = ( CONSTANTS(:,158).*( ALGEBRAIC(:,108).*(CONSTANTS(:,158)+CONSTANTS(:,168)+ALGEBRAIC(:,107))+ ALGEBRAIC(:,107).*ALGEBRAIC(:,106)))./ALGEBRAIC(:,113); ALGEBRAIC(:,127) = ALGEBRAIC(:,115).*ALGEBRAIC(:,103)+ ALGEBRAIC(:,117).*ALGEBRAIC(:,104); ALGEBRAIC(:,105) = ( (1.00000./CONSTANTS(:,110)).*CONSTANTS(:,109).*(ALGEBRAIC(:,95)+CONSTANTS(:,108)))./( CONSTANTS(:,109).*ALGEBRAIC(:,95)+CONSTANTS(:,108)); ALGEBRAIC(:,129) = ALGEBRAIC(:,105); RATES(:,20) = - (ALGEBRAIC(:,119)+ALGEBRAIC(:,127)).*STATES(:,20)+ ALGEBRAIC(:,121).*STATES(:,21)+ ALGEBRAIC(:,129).*STATES(:,22); ALGEBRAIC(:,91) = ( CONSTANTS(:,96).*power(STATES(:,17), 2.00000))./(power(CONSTANTS(:,97), 2.00000)+power(STATES(:,17), 2.00000)); ALGEBRAIC(:,99) = ( CONSTANTS(:,103).*(STATES(:,18) - STATES(:,17)))./(1.00000+CONSTANTS(:,103)./CONSTANTS(:,102)); ALGEBRAIC(:,100) = piecewise({abs(ALGEBRAIC(:,93))>1.00000e-05, ( CONSTANTS(:,103).*((STATES(:,18) - STATES(:,17))+ (( (CONSTANTS(:,104)./CONSTANTS(:,102)).*ALGEBRAIC(:,93))./(1.00000 - ALGEBRAIC(:,94))).*(STATES(:,18) - CONSTANTS(:,86).*ALGEBRAIC(:,94))))./(1.00000+CONSTANTS(:,103)./CONSTANTS(:,102)+( (CONSTANTS(:,104)./CONSTANTS(:,102)).*ALGEBRAIC(:,93))./(1.00000 - ALGEBRAIC(:,94))) }, ( CONSTANTS(:,103).*((STATES(:,18) - STATES(:,17))+ (( (CONSTANTS(:,104)./CONSTANTS(:,102)).*1.00000e-05)./(1.00000 - exp( - 1.00000e-05))).*(STATES(:,18) - CONSTANTS(:,86).*exp( - 1.00000e-05))))./(1.00000+CONSTANTS(:,103)./CONSTANTS(:,102)+( (CONSTANTS(:,104)./CONSTANTS(:,102)).*1.00000e-05)./(1.00000 - exp( - 1.00000e-05)))); ALGEBRAIC(:,118) = ALGEBRAIC(:,116).*ALGEBRAIC(:,100)+ ALGEBRAIC(:,99).*ALGEBRAIC(:,115); ALGEBRAIC(:,120) = ( ALGEBRAIC(:,99).*ALGEBRAIC(:,108))./(CONSTANTS(:,168)+ALGEBRAIC(:,108)); ALGEBRAIC(:,130) = ( ( STATES(:,20).*ALGEBRAIC(:,118)+ STATES(:,22).*ALGEBRAIC(:,120)).*CONSTANTS(:,6))./CONSTANTS(:,4); ALGEBRAIC(:,132) = ( - ALGEBRAIC(:,130)+ALGEBRAIC(:,91)) - CONSTANTS(:,100).*(STATES(:,18) - STATES(:,17)); RATES(:,18) = (CONSTANTS(:,4)./CONSTANTS(:,5)).*ALGEBRAIC(:,132); ALGEBRAIC(:,131) = ( CONSTANTS(:,158).*ALGEBRAIC(:,104))./(ALGEBRAIC(:,106)+CONSTANTS(:,158)); ALGEBRAIC(:,133) = ALGEBRAIC(:,105); ALGEBRAIC(:,134) = ((1.00000 - STATES(:,20)) - STATES(:,21)) - STATES(:,22); RATES(:,21) = ( ALGEBRAIC(:,119).*STATES(:,20) - (ALGEBRAIC(:,121)+ALGEBRAIC(:,131)).*STATES(:,21))+ ALGEBRAIC(:,133).*ALGEBRAIC(:,134); ALGEBRAIC(:,123) = ( CONSTANTS(:,168).*ALGEBRAIC(:,110))./(CONSTANTS(:,168)+ALGEBRAIC(:,108)); ALGEBRAIC(:,125) = ALGEBRAIC(:,112); RATES(:,22) = ( ALGEBRAIC(:,127).*STATES(:,20) - (ALGEBRAIC(:,129)+ALGEBRAIC(:,123)).*STATES(:,22))+ ALGEBRAIC(:,125).*ALGEBRAIC(:,134); ALGEBRAIC(:,135) = ( CONSTANTS(:,123).*STATES(:,23))./CONSTANTS(:,171); ALGEBRAIC(:,136) = ALGEBRAIC(:,135).*CONSTANTS(:,160); ALGEBRAIC(:,137) = STATES(:,24)+STATES(:,25)+STATES(:,26); ALGEBRAIC(:,138) = piecewise({ALGEBRAIC(:,137)<0.00000, ( ALGEBRAIC(:,136).*( CONSTANTS(:,134).*ALGEBRAIC(:,137)+1.00000))./(1.00000 - ALGEBRAIC(:,137)) }, ( ALGEBRAIC(:,136).*(1.00000+ (CONSTANTS(:,134)+2.00000).*ALGEBRAIC(:,137)))./(1.00000+ALGEBRAIC(:,137))); ALGEBRAIC(:,139) = piecewise({1.00000 - ALGEBRAIC(:,138)./( CONSTANTS(:,121).*CONSTANTS(:,123))>0.100000, CONSTANTS(:,120).*(1.00000 - ALGEBRAIC(:,138)./( CONSTANTS(:,121).*CONSTANTS(:,123))) }, CONSTANTS(:,120).*0.100000); ALGEBRAIC(:,140) = (CONSTANTS(:,101) - STATES(:,19)).*ALGEBRAIC(:,139) - STATES(:,17).*STATES(:,19).*CONSTANTS(:,119); RATES(:,17) = (1.00000./(1.00000+( CONSTANTS(:,98).*CONSTANTS(:,99))./( (STATES(:,17)+CONSTANTS(:,99)).*(STATES(:,17)+CONSTANTS(:,99))))).*((ALGEBRAIC(:,140) - ALGEBRAIC(:,132))+( ((( 2.00000.*ALGEBRAIC(:,88) - ALGEBRAIC(:,82)) - ALGEBRAIC(:,84)) - ALGEBRAIC(:,128)).*CONSTANTS(:,7))./( 2.00000.*CONSTANTS(:,4).*CONSTANTS(:,10))); RATES(:,19) = ALGEBRAIC(:,140); RATES = RATES'; end % Calculate algebraic variables function ALGEBRAIC = computeAlgebraic(ALGEBRAIC, CONSTANTS, STATES, VOI) statesSize = size(STATES); statesColumnCount = statesSize(2); if ( statesColumnCount == 1) STATES = STATES'; utilOnes = 1; else statesRowCount = statesSize(1); utilOnes = ones(statesRowCount, 1); end ALGEBRAIC(:,8) = 1.00000./(1.00000+exp((STATES(:,1)+87.5000)./10.3000)); ALGEBRAIC(:,1) = 1.00000./(1.00000+exp((STATES(:,1)+45.0000)./ - 6.50000)); ALGEBRAIC(:,13) = 1.36000./(( 0.320000.*(STATES(:,1)+47.1300))./(1.00000 - exp( - 0.100000.*(STATES(:,1)+47.1300)))+ 0.0800000.*exp( - STATES(:,1)./11.0000)); ALGEBRAIC(:,2) = 1.00000./(1.00000+exp((STATES(:,1)+76.1000)./6.07000)); ALGEBRAIC(:,14) = piecewise({STATES(:,1)>= - 40.0000, 0.453700.*(1.00000+exp( - (STATES(:,1)+10.6600)./11.1000)) }, 3.49000./( 0.135000.*exp( - (STATES(:,1)+80.0000)./6.80000)+ 3.56000.*exp( 0.0790000.*STATES(:,1))+ 310000..*exp( 0.350000.*STATES(:,1)))); ALGEBRAIC(:,3) = 1.00000./(1.00000+exp((STATES(:,1)+76.1000)./6.07000)); ALGEBRAIC(:,15) = piecewise({STATES(:,1)>= - 40.0000, ( 11.6300.*(1.00000+exp( - 0.100000.*(STATES(:,1)+32.0000))))./exp( - 2.53500e-07.*STATES(:,1)) }, 3.49000./( ((STATES(:,1)+37.7800)./(1.00000+exp( 0.311000.*(STATES(:,1)+79.2300)))).*( - 127140..*exp( 0.244400.*STATES(:,1)) - 3.47400e-05.*exp( - 0.0439100.*STATES(:,1)))+( 0.121200.*exp( - 0.0105200.*STATES(:,1)))./(1.00000+exp( - 0.137800.*(STATES(:,1)+40.1400))))); ALGEBRAIC(:,16) = 1000.00./( 45.1600.*exp( 0.0357700.*(STATES(:,1)+50.0000))+ 98.9000.*exp( - 0.100000.*(STATES(:,1)+38.0000))); ALGEBRAIC(:,4) = 1.00000./(1.00000+exp((STATES(:,1)+10.6000)./ - 11.4200)); ALGEBRAIC(:,17) = 550.000.*exp( - power((STATES(:,1)+70.0000)./25.0000, 2.00000))+49.0000; ALGEBRAIC(:,5) = 1.00000./(1.00000+exp((STATES(:,1)+45.3000)./6.88410)); ALGEBRAIC(:,18) = 3300.00.*exp( - power((STATES(:,1)+70.0000)./30.0000, 2.00000))+49.0000; ALGEBRAIC(:,6) = 1.00000./(1.00000+exp((STATES(:,1)+45.3000)./6.88410)); ALGEBRAIC(:,19) = 10000.0./( 45.1600.*exp( 0.0357700.*(STATES(:,1)+50.0000))+ 98.9000.*exp( - 0.100000.*(STATES(:,1)+38.0000))); ALGEBRAIC(:,7) = 1.00000./(1.00000+exp((STATES(:,1)+11.5000)./ - 11.8200)); ALGEBRAIC(:,20) = 1000.00./( 0.118850.*exp((STATES(:,1)+80.0000)./28.3700)+ 0.562300.*exp((STATES(:,1)+80.0000)./ - 14.1900)); ALGEBRAIC(:,9) = 1.00000./(1.00000+exp((STATES(:,1)+138.600)./10.4800)); ALGEBRAIC(:,11) = CONSTANTS(:,101) - STATES(:,19); ALGEBRAIC(:,22) = CONSTANTS(:,124).*power(ALGEBRAIC(:,11)./CONSTANTS(:,169), CONSTANTS(:,129)); ALGEBRAIC(:,24) = CONSTANTS(:,125)+( CONSTANTS(:,126).*power(STATES(:,23), CONSTANTS(:,127) - 1.00000))./(power(STATES(:,23), CONSTANTS(:,127))+power(CONSTANTS(:,128), CONSTANTS(:,127))); ALGEBRAIC(:,26) = (( CONSTANTS(:,8).*CONSTANTS(:,9))./CONSTANTS(:,10)).*log(CONSTANTS(:,24)./STATES(:,6)); ALGEBRAIC(:,31) = ( CONSTANTS(:,146).*STATES(:,7).*( CONSTANTS(:,22).*STATES(:,8)+ CONSTANTS(:,23).*STATES(:,9)).*(STATES(:,1) - ALGEBRAIC(:,26)))./CONSTANTS(:,7); ALGEBRAIC(:,32) = ( CONSTANTS(:,25).*STATES(:,10).*STATES(:,11).*(STATES(:,1) - ALGEBRAIC(:,26)))./CONSTANTS(:,7); ALGEBRAIC(:,33) = (( (0.0480000./(exp((STATES(:,1)+37.0000)./25.0000)+exp((STATES(:,1)+37.0000)./ - 25.0000))+0.0100000).*0.00100000)./(1.00000+exp((STATES(:,1) - (ALGEBRAIC(:,26)+76.7700))./ - 17.0000))+( CONSTANTS(:,26).*(STATES(:,1) - (ALGEBRAIC(:,26)+1.73000)))./( (1.00000+exp(( 1.61300.*CONSTANTS(:,10).*(STATES(:,1) - (ALGEBRAIC(:,26)+1.73000)))./( CONSTANTS(:,8).*CONSTANTS(:,9)))).*(1.00000+exp((CONSTANTS(:,24) - 0.998800)./ - 0.124000))))./CONSTANTS(:,7); ALGEBRAIC(:,40) = 1.00000./(1.00000+power(CONSTANTS(:,35)./STATES(:,2), 4.00000)); ALGEBRAIC(:,41) = 1.00000./(1.00000+ 0.124500.*exp(( - 0.100000.*STATES(:,1).*CONSTANTS(:,10))./( CONSTANTS(:,8).*CONSTANTS(:,9)))+ 0.0365000.*CONSTANTS(:,149).*exp(( - STATES(:,1).*CONSTANTS(:,10))./( CONSTANTS(:,8).*CONSTANTS(:,9)))); ALGEBRAIC(:,42) = (( (CONSTANTS(:,33)./CONSTANTS(:,7)).*ALGEBRAIC(:,41).*CONSTANTS(:,24))./(CONSTANTS(:,24)+CONSTANTS(:,34))).*ALGEBRAIC(:,40); ALGEBRAIC(:,10) = piecewise({VOI - floor(VOI./CONSTANTS(:,12)).*CONSTANTS(:,12)>=0.00000&VOI - floor(VOI./CONSTANTS(:,12)).*CONSTANTS(:,12)<=CONSTANTS(:,13), CONSTANTS(:,14)./CONSTANTS(:,7) }, 0.00000); ALGEBRAIC(:,39) = ( CONSTANTS(:,32).*CONSTANTS(:,30).*(STATES(:,1) - ALGEBRAIC(:,26)))./CONSTANTS(:,7); ALGEBRAIC(:,28) = ( CONSTANTS(:,16).*CONSTANTS(:,142).*(STATES(:,1) - ALGEBRAIC(:,26)))./CONSTANTS(:,7); ALGEBRAIC(:,30) = ( (CONSTANTS(:,18)./(1.00000+exp( - (10.0000+STATES(:,1))./45.0000))).*(STATES(:,1) - ALGEBRAIC(:,26)).*CONSTANTS(:,144))./CONSTANTS(:,7); ALGEBRAIC(:,35) = ( CONSTANTS(:,27).*STATES(:,12).*CONSTANTS(:,148).*(STATES(:,1) - ALGEBRAIC(:,26)))./CONSTANTS(:,7); ALGEBRAIC(:,73) = (( CONSTANTS(:,8).*CONSTANTS(:,9))./CONSTANTS(:,10)).*log(STATES(:,15)./CONSTANTS(:,46)); ALGEBRAIC(:,74) = CONSTANTS(:,83).*(STATES(:,1) - ALGEBRAIC(:,73)); ALGEBRAIC(:,53) = 1000.00.*power(10.0000, - 14.0000+STATES(:,14)); ALGEBRAIC(:,54) = 1.00000+CONSTANTS(:,47)./STATES(:,15)+( CONSTANTS(:,47).*ALGEBRAIC(:,53))./( STATES(:,15).*CONSTANTS(:,48)); ALGEBRAIC(:,55) = 1.00000+CONSTANTS(:,48)./ALGEBRAIC(:,53)+( CONSTANTS(:,48).*STATES(:,15))./( ALGEBRAIC(:,53).*CONSTANTS(:,47)); ALGEBRAIC(:,56) = 1.00000./(CONSTANTS(:,175)+( ALGEBRAIC(:,55).*(CONSTANTS(:,49)+( CONSTANTS(:,51).*CONSTANTS(:,175))./CONSTANTS(:,176)))./(CONSTANTS(:,50)+( CONSTANTS(:,173).*ALGEBRAIC(:,55))./ALGEBRAIC(:,54))); ALGEBRAIC(:,57) = 1.00000./(ALGEBRAIC(:,55)+( CONSTANTS(:,175).*(CONSTANTS(:,50)+( CONSTANTS(:,173).*ALGEBRAIC(:,55))./ALGEBRAIC(:,54)))./(CONSTANTS(:,49)+( CONSTANTS(:,51).*CONSTANTS(:,175))./CONSTANTS(:,176))); ALGEBRAIC(:,58) = (( CONSTANTS(:,4).*( CONSTANTS(:,50).*ALGEBRAIC(:,57) - CONSTANTS(:,49).*ALGEBRAIC(:,56)))./( 60.0000.*1000.00)).*CONSTANTS(:,52); ALGEBRAIC(:,67) = 1.00000+CONSTANTS(:,63)./STATES(:,15)+( CONSTANTS(:,63).*STATES(:,16))./( STATES(:,15).*CONSTANTS(:,64)); ALGEBRAIC(:,68) = 1.00000+CONSTANTS(:,64)./STATES(:,16)+( CONSTANTS(:,64).*STATES(:,15))./( STATES(:,16).*CONSTANTS(:,63)); ALGEBRAIC(:,69) = 1.00000./(CONSTANTS(:,187)+( ALGEBRAIC(:,68).*(CONSTANTS(:,65)+( CONSTANTS(:,67).*CONSTANTS(:,187))./CONSTANTS(:,188)))./(CONSTANTS(:,66)+( CONSTANTS(:,181).*ALGEBRAIC(:,68))./ALGEBRAIC(:,67))); ALGEBRAIC(:,70) = 1.00000./(ALGEBRAIC(:,68)+( CONSTANTS(:,187).*(CONSTANTS(:,66)+( CONSTANTS(:,181).*ALGEBRAIC(:,68))./ALGEBRAIC(:,67)))./(CONSTANTS(:,65)+( CONSTANTS(:,67).*CONSTANTS(:,187))./CONSTANTS(:,188))); ALGEBRAIC(:,66) = 1000.00.*power(10.0000, - STATES(:,14)); ALGEBRAIC(:,71) = ( (power(CONSTANTS(:,180), CONSTANTS(:,69))./(power(ALGEBRAIC(:,66), CONSTANTS(:,69))+power(CONSTANTS(:,180), CONSTANTS(:,69)))).*power(CONSTANTS(:,182), CONSTANTS(:,71)))./(power(CONSTANTS(:,182), CONSTANTS(:,71))+power(CONSTANTS(:,70), CONSTANTS(:,71))); ALGEBRAIC(:,72) = (( CONSTANTS(:,4).*ALGEBRAIC(:,71).*( CONSTANTS(:,66).*ALGEBRAIC(:,70) - CONSTANTS(:,65).*ALGEBRAIC(:,69)))./( 60.0000.*1000.00)).*CONSTANTS(:,72); ALGEBRAIC(:,59) = 1.00000+CONSTANTS(:,54)./STATES(:,16)+( CONSTANTS(:,53).*CONSTANTS(:,54))./( STATES(:,16).*STATES(:,2)); ALGEBRAIC(:,60) = 1.00000+STATES(:,2)./CONSTANTS(:,53)+( STATES(:,2).*STATES(:,16))./( CONSTANTS(:,53).*CONSTANTS(:,54)); ALGEBRAIC(:,62) = 1.00000./(CONSTANTS(:,185)+( ALGEBRAIC(:,60).*(CONSTANTS(:,55)+( CONSTANTS(:,57).*CONSTANTS(:,185))./CONSTANTS(:,186)))./(CONSTANTS(:,56)+( CONSTANTS(:,177).*ALGEBRAIC(:,60))./ALGEBRAIC(:,59))); ALGEBRAIC(:,63) = 1.00000./(ALGEBRAIC(:,60)+( CONSTANTS(:,185).*(CONSTANTS(:,56)+( CONSTANTS(:,177).*ALGEBRAIC(:,60))./ALGEBRAIC(:,59)))./(CONSTANTS(:,55)+( CONSTANTS(:,57).*CONSTANTS(:,185))./CONSTANTS(:,186))); ALGEBRAIC(:,61) = 1000.00.*power(10.0000, - STATES(:,14)); ALGEBRAIC(:,64) = (power(ALGEBRAIC(:,61), CONSTANTS(:,59))./(power(ALGEBRAIC(:,61), CONSTANTS(:,59))+power(CONSTANTS(:,58), CONSTANTS(:,59)))).*(1.00000 - power(CONSTANTS(:,178), CONSTANTS(:,61))./(power(CONSTANTS(:,178), CONSTANTS(:,61))+power(CONSTANTS(:,60), CONSTANTS(:,61)))); ALGEBRAIC(:,65) = (( CONSTANTS(:,4).*ALGEBRAIC(:,64).*( CONSTANTS(:,56).*ALGEBRAIC(:,63) - CONSTANTS(:,55).*ALGEBRAIC(:,62)))./( 60.0000.*1000.00)).*CONSTANTS(:,62); ALGEBRAIC(:,80) = (CONSTANTS(:,4)+CONSTANTS(:,5)).*( CONSTANTS(:,76).*STATES(:,13) - CONSTANTS(:,77).*STATES(:,16).*power(10.0000, - STATES(:,14)).*1000.00); ALGEBRAIC(:,43) = CONSTANTS(:,4).*CONSTANTS(:,141).*CONSTANTS(:,36).*(CONSTANTS(:,183) - STATES(:,13)); ALGEBRAIC(:,75) = 1000.00.*power(10.0000, - STATES(:,14)); ALGEBRAIC(:,76) = (( CONSTANTS(:,8).*CONSTANTS(:,9))./CONSTANTS(:,10)).*log(CONSTANTS(:,151)./ALGEBRAIC(:,75)); ALGEBRAIC(:,77) = CONSTANTS(:,84).*(STATES(:,1) - ALGEBRAIC(:,76)); ALGEBRAIC(:,47) = power(10.0000, - STATES(:,14)).*1000.00; ALGEBRAIC(:,48) = ( CONSTANTS(:,39).*STATES(:,2).*CONSTANTS(:,41))./( CONSTANTS(:,38).*CONSTANTS(:,39)+ CONSTANTS(:,39).*STATES(:,2)+ STATES(:,2).*ALGEBRAIC(:,47)+ CONSTANTS(:,38).*ALGEBRAIC(:,47)); ALGEBRAIC(:,49) = ( CONSTANTS(:,38).*ALGEBRAIC(:,47).*CONSTANTS(:,42))./( CONSTANTS(:,38).*CONSTANTS(:,39)+ CONSTANTS(:,39).*STATES(:,2)+ STATES(:,2).*ALGEBRAIC(:,47)+ CONSTANTS(:,38).*ALGEBRAIC(:,47)); ALGEBRAIC(:,50) = power(ALGEBRAIC(:,47), CONSTANTS(:,44))./(power(ALGEBRAIC(:,47), CONSTANTS(:,44))+power(CONSTANTS(:,161), CONSTANTS(:,44))); ALGEBRAIC(:,51) = ( ALGEBRAIC(:,50).*( CONSTANTS(:,170).*ALGEBRAIC(:,49) - ALGEBRAIC(:,48).*CONSTANTS(:,172)))./(CONSTANTS(:,170)+ALGEBRAIC(:,49)+ALGEBRAIC(:,48)+CONSTANTS(:,172)); ALGEBRAIC(:,52) = ALGEBRAIC(:,51).*CONSTANTS(:,4).*CONSTANTS(:,45); ALGEBRAIC(:,78) = log(10.0000).*(power(10.0000, - STATES(:,14))+( power(10.0000, STATES(:,14)+CONSTANTS(:,78)).*CONSTANTS(:,79))./power(power(10.0000, STATES(:,14))+power(10.0000, CONSTANTS(:,78)), 2.00000)+( power(10.0000, STATES(:,14)+CONSTANTS(:,80)).*CONSTANTS(:,81))./power(power(10.0000, STATES(:,14))+power(10.0000, CONSTANTS(:,80)), 2.00000)); ALGEBRAIC(:,21) = (( CONSTANTS(:,8).*CONSTANTS(:,9))./CONSTANTS(:,10)).*log(CONSTANTS(:,20)./STATES(:,2)); ALGEBRAIC(:,25) = ( CONSTANTS(:,145).*power(STATES(:,3), 3.00000).*STATES(:,4).*STATES(:,5).*(STATES(:,1) - ALGEBRAIC(:,21)))./CONSTANTS(:,7); ALGEBRAIC(:,85) = exp( CONSTANTS(:,89).*0.500000.*STATES(:,1).*CONSTANTS(:,93)); ALGEBRAIC(:,86) = exp( CONSTANTS(:,89).*0.500000.*STATES(:,1).*(CONSTANTS(:,93) - 1.00000)); ALGEBRAIC(:,87) = power(STATES(:,2), 3.00000); ALGEBRAIC(:,88) = ( (( (CONSTANTS(:,95)./( (CONSTANTS(:,152)+power(CONSTANTS(:,91), 3.00000)).*(CONSTANTS(:,86)+CONSTANTS(:,92)))).*( ALGEBRAIC(:,85).*ALGEBRAIC(:,87).*CONSTANTS(:,86) - ALGEBRAIC(:,86).*CONSTANTS(:,152).*STATES(:,17)))./(1.00000+ CONSTANTS(:,94).*ALGEBRAIC(:,86))).*CONSTANTS(:,4).*CONSTANTS(:,10))./CONSTANTS(:,7); ALGEBRAIC(:,38) = ( CONSTANTS(:,31).*CONSTANTS(:,29).*(STATES(:,1) - ALGEBRAIC(:,21)))./CONSTANTS(:,7); ALGEBRAIC(:,23) = (( CONSTANTS(:,16).*CONSTANTS(:,142).*(STATES(:,1) - ALGEBRAIC(:,21)))./CONSTANTS(:,7)).*CONSTANTS(:,143); ALGEBRAIC(:,34) = ( CONSTANTS(:,27).*STATES(:,12).*CONSTANTS(:,28).*(STATES(:,1) - ALGEBRAIC(:,21)))./CONSTANTS(:,7); ALGEBRAIC(:,37) = ALGEBRAIC(:,34)+ALGEBRAIC(:,35); ALGEBRAIC(:,93) = CONSTANTS(:,89).*STATES(:,1); ALGEBRAIC(:,94) = exp( - ALGEBRAIC(:,93)); ALGEBRAIC(:,102) = piecewise({abs(ALGEBRAIC(:,93))>1.00000e-05, ( (( CONSTANTS(:,104).*ALGEBRAIC(:,93))./(1.00000 - ALGEBRAIC(:,94))).*(( CONSTANTS(:,86).*ALGEBRAIC(:,94) - STATES(:,17))+ (CONSTANTS(:,103)./CONSTANTS(:,102)).*( CONSTANTS(:,86).*ALGEBRAIC(:,94) - STATES(:,18))))./(1.00000+CONSTANTS(:,103)./CONSTANTS(:,102)+( (CONSTANTS(:,104)./CONSTANTS(:,102)).*ALGEBRAIC(:,93))./(1.00000 - ALGEBRAIC(:,94))) }, ( (( CONSTANTS(:,104).*1.00000e-05)./(1.00000 - exp( - 1.00000e-05))).*(( CONSTANTS(:,86).*exp( - 1.00000e-05) - STATES(:,17))+ (CONSTANTS(:,103)./CONSTANTS(:,102)).*( CONSTANTS(:,86).*exp( - 1.00000e-05) - STATES(:,18))))./(1.00000+CONSTANTS(:,103)./CONSTANTS(:,102)+( (CONSTANTS(:,104)./CONSTANTS(:,102)).*1.00000e-05)./(1.00000 - exp( - 1.00000e-05)))); ALGEBRAIC(:,101) = piecewise({abs(ALGEBRAIC(:,93))>1.00000e-05, ( (( CONSTANTS(:,104).*ALGEBRAIC(:,93))./(1.00000 - ALGEBRAIC(:,94))).*( CONSTANTS(:,86).*ALGEBRAIC(:,94) - STATES(:,17)))./(1.00000+( (CONSTANTS(:,104)./CONSTANTS(:,102)).*ALGEBRAIC(:,93))./(1.00000 - ALGEBRAIC(:,94))) }, ( (( CONSTANTS(:,104).*1.00000e-05)./(1.00000 - exp( - 1.00000e-05))).*( CONSTANTS(:,86).*exp( - 1.00000e-05) - STATES(:,17)))./(1.00000+( (CONSTANTS(:,104)./CONSTANTS(:,102)).*1.00000e-05)./(1.00000 - exp( - 1.00000e-05)))); ALGEBRAIC(:,95) = exp((STATES(:,1) - CONSTANTS(:,105))./CONSTANTS(:,106)); ALGEBRAIC(:,106) = ALGEBRAIC(:,95)./( CONSTANTS(:,107).*(ALGEBRAIC(:,95)+1.00000)); ALGEBRAIC(:,108) = ( (1.00000./CONSTANTS(:,153)).*power(STATES(:,17), 2.00000))./(power(STATES(:,17), 2.00000)+power(CONSTANTS(:,116), 2.00000)); ALGEBRAIC(:,98) = piecewise({abs(ALGEBRAIC(:,93))>1.00000e-09, (STATES(:,17)+( (CONSTANTS(:,104)./CONSTANTS(:,102)).*CONSTANTS(:,86).*ALGEBRAIC(:,93).*ALGEBRAIC(:,94))./(1.00000 - ALGEBRAIC(:,94)))./(1.00000+( (CONSTANTS(:,104)./CONSTANTS(:,102)).*ALGEBRAIC(:,93))./(1.00000 - ALGEBRAIC(:,94))) }, (STATES(:,17)+ (CONSTANTS(:,104)./CONSTANTS(:,102)).*CONSTANTS(:,86))./(1.00000+CONSTANTS(:,104)./CONSTANTS(:,102))); ALGEBRAIC(:,107) = ( (1.00000./CONSTANTS(:,153)).*power(ALGEBRAIC(:,98), 2.00000))./(power(ALGEBRAIC(:,98), 2.00000)+power(CONSTANTS(:,116), 2.00000)); ALGEBRAIC(:,113) = (ALGEBRAIC(:,106)+CONSTANTS(:,158)).*( (CONSTANTS(:,168)+ALGEBRAIC(:,107)+CONSTANTS(:,158)).*(CONSTANTS(:,168)+ALGEBRAIC(:,108))+ ALGEBRAIC(:,106).*(CONSTANTS(:,168)+ALGEBRAIC(:,107))); ALGEBRAIC(:,114) = ( ALGEBRAIC(:,106).*CONSTANTS(:,168).*(ALGEBRAIC(:,106)+CONSTANTS(:,158)+CONSTANTS(:,168)+ALGEBRAIC(:,108)))./ALGEBRAIC(:,113); ALGEBRAIC(:,116) = ( ALGEBRAIC(:,106).*( ALGEBRAIC(:,107).*(ALGEBRAIC(:,106)+CONSTANTS(:,168)+ALGEBRAIC(:,108))+ ALGEBRAIC(:,108).*CONSTANTS(:,158)))./ALGEBRAIC(:,113); ALGEBRAIC(:,122) = ALGEBRAIC(:,102).*ALGEBRAIC(:,116)+ ALGEBRAIC(:,101).*ALGEBRAIC(:,114); ALGEBRAIC(:,124) = ( ALGEBRAIC(:,101).*ALGEBRAIC(:,106))./(ALGEBRAIC(:,106)+CONSTANTS(:,158)); ALGEBRAIC(:,126) = ( ( STATES(:,20).*ALGEBRAIC(:,122)+ STATES(:,21).*ALGEBRAIC(:,124)).*CONSTANTS(:,6))./CONSTANTS(:,4); ALGEBRAIC(:,128) = ( - ALGEBRAIC(:,126).*2.00000.*CONSTANTS(:,4).*CONSTANTS(:,10))./CONSTANTS(:,7); ALGEBRAIC(:,83) = arbitrary_log(CONSTANTS(:,86)./STATES(:,17), 10)./CONSTANTS(:,89); ALGEBRAIC(:,84) = ( CONSTANTS(:,90).*(STATES(:,1) - ALGEBRAIC(:,83)).*2.00000.*CONSTANTS(:,4).*CONSTANTS(:,10))./CONSTANTS(:,7); ALGEBRAIC(:,82) = ( (( CONSTANTS(:,87).*STATES(:,17))./(CONSTANTS(:,88)+STATES(:,17))).*2.00000.*CONSTANTS(:,4).*CONSTANTS(:,10))./CONSTANTS(:,7); ALGEBRAIC(:,109) = ( (1.00000./CONSTANTS(:,114)).*(power(ALGEBRAIC(:,98), 2.00000)+ CONSTANTS(:,117).*power(CONSTANTS(:,116), 2.00000)))./(power(ALGEBRAIC(:,98), 2.00000)+power(CONSTANTS(:,116), 2.00000)); ALGEBRAIC(:,110) = ( (1.00000./CONSTANTS(:,114)).*(power(STATES(:,17), 2.00000)+ CONSTANTS(:,117).*power(CONSTANTS(:,116), 2.00000)))./(power(STATES(:,17), 2.00000)+power(CONSTANTS(:,116), 2.00000)); ALGEBRAIC(:,117) = ( CONSTANTS(:,158).*CONSTANTS(:,168).*(CONSTANTS(:,158)+ALGEBRAIC(:,106)+CONSTANTS(:,168)+ALGEBRAIC(:,107)))./ALGEBRAIC(:,113); ALGEBRAIC(:,119) = ALGEBRAIC(:,114).*ALGEBRAIC(:,109)+ ALGEBRAIC(:,117).*ALGEBRAIC(:,110); ALGEBRAIC(:,111) = ( (CONSTANTS(:,115)./CONSTANTS(:,114)).*CONSTANTS(:,118).*(power(ALGEBRAIC(:,98), 2.00000)+ CONSTANTS(:,117).*power(CONSTANTS(:,116), 2.00000)))./( CONSTANTS(:,118).*power(ALGEBRAIC(:,98), 2.00000)+ CONSTANTS(:,117).*power(CONSTANTS(:,116), 2.00000)); ALGEBRAIC(:,112) = ( (CONSTANTS(:,115)./CONSTANTS(:,114)).*CONSTANTS(:,118).*(power(STATES(:,17), 2.00000)+ CONSTANTS(:,117).*power(CONSTANTS(:,116), 2.00000)))./( CONSTANTS(:,118).*power(STATES(:,17), 2.00000)+ CONSTANTS(:,117).*power(CONSTANTS(:,116), 2.00000)); ALGEBRAIC(:,121) = ( ALGEBRAIC(:,106).*ALGEBRAIC(:,111)+ CONSTANTS(:,158).*ALGEBRAIC(:,112))./(ALGEBRAIC(:,106)+CONSTANTS(:,158)); ALGEBRAIC(:,97) = (STATES(:,17)+ (CONSTANTS(:,103)./CONSTANTS(:,102)).*STATES(:,18))./(1.00000+CONSTANTS(:,103)./CONSTANTS(:,102)); ALGEBRAIC(:,103) = ( (( (1.00000./CONSTANTS(:,110)).*ALGEBRAIC(:,97))./CONSTANTS(:,111)).*(ALGEBRAIC(:,95)+CONSTANTS(:,108)))./(ALGEBRAIC(:,95)+1.00000); ALGEBRAIC(:,104) = ( (( (1.00000./CONSTANTS(:,110)).*STATES(:,17))./CONSTANTS(:,111)).*(ALGEBRAIC(:,95)+CONSTANTS(:,108)))./(ALGEBRAIC(:,95)+1.00000); ALGEBRAIC(:,115) = ( CONSTANTS(:,158).*( ALGEBRAIC(:,108).*(CONSTANTS(:,158)+CONSTANTS(:,168)+ALGEBRAIC(:,107))+ ALGEBRAIC(:,107).*ALGEBRAIC(:,106)))./ALGEBRAIC(:,113); ALGEBRAIC(:,127) = ALGEBRAIC(:,115).*ALGEBRAIC(:,103)+ ALGEBRAIC(:,117).*ALGEBRAIC(:,104); ALGEBRAIC(:,105) = ( (1.00000./CONSTANTS(:,110)).*CONSTANTS(:,109).*(ALGEBRAIC(:,95)+CONSTANTS(:,108)))./( CONSTANTS(:,109).*ALGEBRAIC(:,95)+CONSTANTS(:,108)); ALGEBRAIC(:,129) = ALGEBRAIC(:,105); ALGEBRAIC(:,91) = ( CONSTANTS(:,96).*power(STATES(:,17), 2.00000))./(power(CONSTANTS(:,97), 2.00000)+power(STATES(:,17), 2.00000)); ALGEBRAIC(:,99) = ( CONSTANTS(:,103).*(STATES(:,18) - STATES(:,17)))./(1.00000+CONSTANTS(:,103)./CONSTANTS(:,102)); ALGEBRAIC(:,100) = piecewise({abs(ALGEBRAIC(:,93))>1.00000e-05, ( CONSTANTS(:,103).*((STATES(:,18) - STATES(:,17))+ (( (CONSTANTS(:,104)./CONSTANTS(:,102)).*ALGEBRAIC(:,93))./(1.00000 - ALGEBRAIC(:,94))).*(STATES(:,18) - CONSTANTS(:,86).*ALGEBRAIC(:,94))))./(1.00000+CONSTANTS(:,103)./CONSTANTS(:,102)+( (CONSTANTS(:,104)./CONSTANTS(:,102)).*ALGEBRAIC(:,93))./(1.00000 - ALGEBRAIC(:,94))) }, ( CONSTANTS(:,103).*((STATES(:,18) - STATES(:,17))+ (( (CONSTANTS(:,104)./CONSTANTS(:,102)).*1.00000e-05)./(1.00000 - exp( - 1.00000e-05))).*(STATES(:,18) - CONSTANTS(:,86).*exp( - 1.00000e-05))))./(1.00000+CONSTANTS(:,103)./CONSTANTS(:,102)+( (CONSTANTS(:,104)./CONSTANTS(:,102)).*1.00000e-05)./(1.00000 - exp( - 1.00000e-05)))); ALGEBRAIC(:,118) = ALGEBRAIC(:,116).*ALGEBRAIC(:,100)+ ALGEBRAIC(:,99).*ALGEBRAIC(:,115); ALGEBRAIC(:,120) = ( ALGEBRAIC(:,99).*ALGEBRAIC(:,108))./(CONSTANTS(:,168)+ALGEBRAIC(:,108)); ALGEBRAIC(:,130) = ( ( STATES(:,20).*ALGEBRAIC(:,118)+ STATES(:,22).*ALGEBRAIC(:,120)).*CONSTANTS(:,6))./CONSTANTS(:,4); ALGEBRAIC(:,132) = ( - ALGEBRAIC(:,130)+ALGEBRAIC(:,91)) - CONSTANTS(:,100).*(STATES(:,18) - STATES(:,17)); ALGEBRAIC(:,131) = ( CONSTANTS(:,158).*ALGEBRAIC(:,104))./(ALGEBRAIC(:,106)+CONSTANTS(:,158)); ALGEBRAIC(:,133) = ALGEBRAIC(:,105); ALGEBRAIC(:,134) = ((1.00000 - STATES(:,20)) - STATES(:,21)) - STATES(:,22); ALGEBRAIC(:,123) = ( CONSTANTS(:,168).*ALGEBRAIC(:,110))./(CONSTANTS(:,168)+ALGEBRAIC(:,108)); ALGEBRAIC(:,125) = ALGEBRAIC(:,112); ALGEBRAIC(:,135) = ( CONSTANTS(:,123).*STATES(:,23))./CONSTANTS(:,171); ALGEBRAIC(:,136) = ALGEBRAIC(:,135).*CONSTANTS(:,160); ALGEBRAIC(:,137) = STATES(:,24)+STATES(:,25)+STATES(:,26); ALGEBRAIC(:,138) = piecewise({ALGEBRAIC(:,137)<0.00000, ( ALGEBRAIC(:,136).*( CONSTANTS(:,134).*ALGEBRAIC(:,137)+1.00000))./(1.00000 - ALGEBRAIC(:,137)) }, ( ALGEBRAIC(:,136).*(1.00000+ (CONSTANTS(:,134)+2.00000).*ALGEBRAIC(:,137)))./(1.00000+ALGEBRAIC(:,137))); ALGEBRAIC(:,139) = piecewise({1.00000 - ALGEBRAIC(:,138)./( CONSTANTS(:,121).*CONSTANTS(:,123))>0.100000, CONSTANTS(:,120).*(1.00000 - ALGEBRAIC(:,138)./( CONSTANTS(:,121).*CONSTANTS(:,123))) }, CONSTANTS(:,120).*0.100000); ALGEBRAIC(:,140) = (CONSTANTS(:,101) - STATES(:,19)).*ALGEBRAIC(:,139) - STATES(:,17).*STATES(:,19).*CONSTANTS(:,119); ALGEBRAIC(:,12) = STATES(:,17); ALGEBRAIC(:,27) = ( ALGEBRAIC(:,25).*CONSTANTS(:,7))./( CONSTANTS(:,4).*CONSTANTS(:,10)); ALGEBRAIC(:,29) = ALGEBRAIC(:,28)+ALGEBRAIC(:,23); ALGEBRAIC(:,36) = ( ALGEBRAIC(:,34).*CONSTANTS(:,7))./( CONSTANTS(:,4).*CONSTANTS(:,10)); ALGEBRAIC(:,44) = ( ALGEBRAIC(:,42).*3.00000.*CONSTANTS(:,7))./( CONSTANTS(:,4).*CONSTANTS(:,10)); ALGEBRAIC(:,45) = ( ALGEBRAIC(:,42).* - 2.00000.*CONSTANTS(:,7))./( CONSTANTS(:,4).*CONSTANTS(:,10)); ALGEBRAIC(:,46) = ( - (ALGEBRAIC(:,28)+ALGEBRAIC(:,32)+ALGEBRAIC(:,30)+ALGEBRAIC(:,31)+ALGEBRAIC(:,33)+ALGEBRAIC(:,35)+ ALGEBRAIC(:,42).* - 2.00000+ALGEBRAIC(:,39)).*CONSTANTS(:,7))./( CONSTANTS(:,4).*CONSTANTS(:,10)); ALGEBRAIC(:,79) = ALGEBRAIC(:,52)./CONSTANTS(:,4); ALGEBRAIC(:,81) = ALGEBRAIC(:,65)./CONSTANTS(:,4); ALGEBRAIC(:,89) = ( - (ALGEBRAIC(:,38)+ALGEBRAIC(:,23)+ALGEBRAIC(:,25)+ ALGEBRAIC(:,88).*3.00000+ ALGEBRAIC(:,42).*3.00000+ALGEBRAIC(:,34)).*CONSTANTS(:,7))./( CONSTANTS(:,4).*CONSTANTS(:,10)); ALGEBRAIC(:,90) = ( ALGEBRAIC(:,88).*3.00000.*CONSTANTS(:,7))./( CONSTANTS(:,4).*CONSTANTS(:,10)); ALGEBRAIC(:,92) = ALGEBRAIC(:,89)+ALGEBRAIC(:,79)+ALGEBRAIC(:,81); ALGEBRAIC(:,96) = piecewise({abs(ALGEBRAIC(:,93))>1.00000e-09, (STATES(:,17)+ (CONSTANTS(:,103)./CONSTANTS(:,102)).*STATES(:,18)+( (CONSTANTS(:,104)./CONSTANTS(:,102)).*CONSTANTS(:,86).*ALGEBRAIC(:,93).*ALGEBRAIC(:,94))./(1.00000 - ALGEBRAIC(:,94)))./(1.00000+CONSTANTS(:,103)./CONSTANTS(:,102)+( (CONSTANTS(:,104)./CONSTANTS(:,102)).*ALGEBRAIC(:,93))./(1.00000 - ALGEBRAIC(:,94))) }, (STATES(:,17)+ (CONSTANTS(:,103)./CONSTANTS(:,102)).*STATES(:,18)+ (CONSTANTS(:,104)./CONSTANTS(:,102)).*CONSTANTS(:,86))./(1.00000+CONSTANTS(:,103)./CONSTANTS(:,102)+CONSTANTS(:,104)./CONSTANTS(:,102))); end % Compute result of a piecewise function function x = piecewise(cases, default) set = [0]; for i = 1:2:length(cases) if (length(cases{i+1}) == 1) x(cases{i} & ~set,:) = cases{i+1}; else x(cases{i} & ~set,:) = cases{i+1}(cases{i} & ~set); end set = set | cases{i}; if(set), break, end end if (length(default) == 1) x(~set,:) = default; else x(~set,:) = default(~set); end end % Compute a logarithm to any base" + function x = arbitrary_log(a, base) x = log(a) ./ log(base); end % Pad out or shorten strings to a set length function strout = strpad(strin) req_length = 160; insize = size(strin,2); if insize > req_length strout = strin(1:req_length); else strout = [strin, blanks(req_length - insize)]; end end