Generated Code
The following is c_ida code generated by the CellML API from this CellML file. (Back to language selection)
The raw code is available.
/* There are a total of 12 entries in the algebraic variable array. There are a total of 5 entries in each of the rate and state variable arrays. There are a total of 32 entries in the constant variable array. */ /* * VOI is time in component environment (millisecond). * STATES[0] is V in component membrane (millivolt). * CONSTANTS[0] is Cm in component membrane (femtofarad). * ALGEBRAIC[10] is Ica in component Ica (femtoampere). * ALGEBRAIC[1] is Is1 in component Is1 (femtoampere). * ALGEBRAIC[8] is Is2 in component Is2 (femtoampere). * ALGEBRAIC[11] is Il in component Il (femtoampere). * ALGEBRAIC[3] is Ik in component Ik (femtoampere). * CONSTANTS[1] is gCa in component Ica (picosiemens). * CONSTANTS[2] is VCa in component Ica (millivolt). * ALGEBRAIC[0] is m_infinity in component m (dimensionless). * CONSTANTS[3] is vm in component m (millivolt). * CONSTANTS[4] is sm in component m (millivolt). * CONSTANTS[5] is gs1 in component Is1 (picosiemens). * CONSTANTS[6] is VK in component Ik (millivolt). * STATES[1] is s1 in component s1 (dimensionless). * ALGEBRAIC[2] is s1_infinity in component s1 (dimensionless). * CONSTANTS[7] is autos1 in component s1 (dimensionless). * CONSTANTS[8] is s1knot in component s1 (dimensionless). * CONSTANTS[9] is tau_s1 in component s1 (millisecond). * CONSTANTS[10] is vs1 in component s1 (millivolt). * CONSTANTS[11] is ss1 in component s1 (millivolt). * CONSTANTS[12] is gK in component Ik (picosiemens). * STATES[2] is n in component n (dimensionless). * ALGEBRAIC[4] is n_infinity in component n (dimensionless). * CONSTANTS[13] is tau_n_bar in component n (millisecond). * ALGEBRAIC[5] is tau_n in component n (millisecond). * CONSTANTS[14] is vn in component n (millivolt). * CONSTANTS[15] is sn in component n (millivolt). * CONSTANTS[16] is gl in component Il (picosiemens). * CONSTANTS[17] is Vl in component Il (millivolt). * ALGEBRAIC[6] is q in component Il (dimensionless). * STATES[3] is p in component Il (dimensionless). * CONSTANTS[18] is alpha_p in component Il (dimensionless). * CONSTANTS[19] is tau_p in component Il (millisecond). * CONSTANTS[30] is beta_p in component Il (dimensionless). * CONSTANTS[20] is p0 in component Il (dimensionless). * CONSTANTS[21] is noise in component Il (dimensionless). * ALGEBRAIC[7] is sigma in component Il (dimensionless). * CONSTANTS[22] is w in component Il (dimensionless). * CONSTANTS[31] is nstoc in component Il (dimensionless). * CONSTANTS[23] is delNoise in component Il (dimensionless). * CONSTANTS[24] is gs2 in component Is2 (picosiemens). * STATES[4] is s2 in component s2 (dimensionless). * ALGEBRAIC[9] is s2_infinity in component s2 (dimensionless). * CONSTANTS[25] is autos2 in component s2 (dimensionless). * CONSTANTS[26] is s2knot in component s2 (dimensionless). * CONSTANTS[27] is tau_s2 in component s2 (millisecond). * CONSTANTS[28] is vs2 in component s2 (millivolt). * CONSTANTS[29] is ss2 in component s2 (millivolt). * RATES[0] is d/dt V in component membrane (millivolt). * RATES[1] is d/dt s1 in component s1 (dimensionless). * RATES[2] is d/dt n in component n (dimensionless). * RATES[3] is d/dt p in component Il (dimensionless). * RATES[4] is d/dt s2 in component s2 (dimensionless). * There are a total of 0 condition variables. */ void initConsts(double* CONSTANTS, double* RATES, double *STATES) { STATES[0] = -40.0; CONSTANTS[0] = 4525.0; CONSTANTS[1] = 280.0; CONSTANTS[2] = 100.0; CONSTANTS[3] = -22.0; CONSTANTS[4] = 7.5; CONSTANTS[5] = 22.0; CONSTANTS[6] = -80.0; STATES[1] = 0.9; CONSTANTS[7] = 1; CONSTANTS[8] = 1; CONSTANTS[9] = 1000.0; CONSTANTS[10] = -50.0; CONSTANTS[11] = 5; CONSTANTS[12] = 1300.0; STATES[2] = 0.0; CONSTANTS[13] = 8.25; CONSTANTS[14] = -9.0; CONSTANTS[15] = 10.0; CONSTANTS[16] = 41.0; CONSTANTS[17] = -40.0; STATES[3] = 0.14; CONSTANTS[18] = 1.0; CONSTANTS[19] = 100.0; CONSTANTS[20] = 0.2; CONSTANTS[21] = 1; CONSTANTS[22] = 1; CONSTANTS[23] = 3; CONSTANTS[24] = 16; STATES[4] = 0.5; CONSTANTS[25] = 1; CONSTANTS[26] = 0.47; CONSTANTS[27] = 30000.0; CONSTANTS[28] = -40.0; CONSTANTS[29] = 15; CONSTANTS[30] = CONSTANTS[18]*(1.00000/CONSTANTS[20] - 1.00000); CONSTANTS[31] = 1000.00/pow(CONSTANTS[23], 2.00000); RATES[0] = 0.1001; RATES[1] = 0.1001; RATES[2] = 0.1001; RATES[3] = 0.1001; RATES[4] = 0.1001; } void computeResiduals(double VOI, double* CONSTANTS, double* RATES, double* OLDRATES, double* STATES, double* OLDSTATES, double* ALGEBRAIC, double* CONDVARS) { resid[0] = RATES[0] - - (ALGEBRAIC[10]+ALGEBRAIC[1]+ALGEBRAIC[8]+ALGEBRAIC[11]+ALGEBRAIC[3])/CONSTANTS[0]; resid[1] = RATES[1] - CONSTANTS[7]*((ALGEBRAIC[2] - STATES[1])/CONSTANTS[9])+ (1.00000 - CONSTANTS[7])*(CONSTANTS[8] - STATES[1]); resid[2] = RATES[2] - (ALGEBRAIC[4] - STATES[2])/ALGEBRAIC[5]; resid[3] = RATES[3] - ( CONSTANTS[18]*(1.00000 - STATES[3]) - CONSTANTS[30]*STATES[3])/CONSTANTS[19]+ CONSTANTS[21]*CONSTANTS[22]*ALGEBRAIC[7]; resid[4] = RATES[4] - CONSTANTS[25]*((ALGEBRAIC[9] - STATES[4])/CONSTANTS[27])+ (1.00000 - CONSTANTS[25])*(CONSTANTS[26] - STATES[4]); } void computeVariables(double VOI, double* CONSTANTS, double* RATES, double* STATES, double* ALGEBRAIC) { } void computeEssentialVariables(double VOI, double* CONSTANTS, double* RATES, double* STATES, double* ALGEBRAIC) { ALGEBRAIC[1] = CONSTANTS[5]*STATES[1]*(STATES[0] - CONSTANTS[6]); ALGEBRAIC[2] = 1.00000/(1.00000+exp((CONSTANTS[10] - STATES[0])/CONSTANTS[11])); ALGEBRAIC[3] = CONSTANTS[12]*STATES[2]*(STATES[0] - CONSTANTS[6]); ALGEBRAIC[4] = 1.00000/(1.00000+exp((CONSTANTS[14] - STATES[0])/CONSTANTS[15])); ALGEBRAIC[5] = CONSTANTS[13]/(1.00000+exp((STATES[0] - CONSTANTS[14])/CONSTANTS[15])); ALGEBRAIC[7] = pow((( CONSTANTS[18]*(1.00000 - STATES[3])+ CONSTANTS[30]*STATES[3])/( CONSTANTS[19]*CONSTANTS[31])), 1.0 / 2); ALGEBRAIC[8] = CONSTANTS[24]*STATES[4]*(STATES[0] - CONSTANTS[6]); ALGEBRAIC[9] = 1.00000/(1.00000+exp((CONSTANTS[28] - STATES[0])/CONSTANTS[29])); ALGEBRAIC[0] = 1.00000/(1.00000+exp((CONSTANTS[3] - STATES[0])/CONSTANTS[4])); ALGEBRAIC[10] = CONSTANTS[1]*ALGEBRAIC[0]*(STATES[0] - CONSTANTS[2]); ALGEBRAIC[6] = (1.00000+STATES[3])/2.00000; ALGEBRAIC[11] = CONSTANTS[16]*ALGEBRAIC[6]*(STATES[0] - CONSTANTS[17]); } void getStateInformation(double* SI) { SI[0] = 1.0; SI[1] = 1.0; SI[2] = 1.0; SI[3] = 1.0; SI[4] = 1.0; } void computeRoots(double VOI, double* CONSTANTS, double* RATES, double* OLDRATES, double* STATES, double* OLDSTATES, double* ALGEBRAIC, double* CONDVARS) { }