trypsin-proMMP9-TIMP1-MMP3
Tr_pM9_T1_M3
c.lloyd@auckland.ac.nz
M9
MMP9
matrix metalloproteinase-9
37596
A Biochemical Model of Matrix Metalloproteinase 9 Activation and Inhibition
37585
282
Karagiannis
D
Emmanouil
Tr_pM9_T1
trypsin-proMMP9-TIMP1
matrix metalloproteinase-3-promatrix metalloproteinase-9-tissue inhibitor of metalloproteinase-1 complex
MMP3-proMMP9-TIMP1
M3_pM9_T1
Catherine Lloyd
signal transduction
systems biology
TIMP
MMP3
biochemical kinetics
MMP
MMP9
angiogenesis
MMP9-TIMP1
matrix metalloproteinase-9-tissue inhibitor of metalloproteinase-1 complex
M9_T1
trypsin
Tr
Vempati et al.'s 2007 biochemical model of the matrix metalloproteinase 9 activation and inhibition.
144000
100000
T1
tissue inhibitor of metalloproteinase-1
TIMP1
Catherine
Lloyd
May
This is the CellML description of Vempati et al.'s 2007 biochemical model of the matrix metalloproteinase 9 activation and inhibition.
matrix metalloproteinase-3
MMP3
M3
MMP9-TIMP1-MMP3
M9_T1_M3
M3_pM9_T1_M3
MMP3-proMMP9-TIMP1-MMP3
M9_T1_star
inactivated matrix metalloproteinase-9-tissue inhibitor of metalloproteinase-1 complex
inactivated MMP9-TIMP1
pM9_T1_M3
proMMP9-TIMP1-MMP3
Tr_pM9
trypsin-proMMP9
This cellML model is known to run in both PCEnv and COR to recreate the results in the published paper. The units have been checked and they are consistent. Please note that many of the figures in the paper are complex and requite special simulation conditions. This particular CellMl model represents the basic core model presented in the paper. Initial conditions can be modified to generate more complex results. We thank the model author Prakash Vempati for his assistance in getting this CellML model to run.
The University of Auckland, Bioengineering Institute
pM9_T1
proMMP9-TIMP1
promatrix metalloproteinase-9-tissue inhibitor of metalloproteinase-1 complex
MMP3-proMMP9
matrix metalloproteinase-3-promatrix metalloproteinase-9 complex
M3_pM9
17848556
Prakasht
Vempati
Aleksander
S
Popel
Auckland Bioengineering Institute
The University of Auckland
keyword
The Journal of Biological Chemistry
matrix metalloproteinase-3-tissue inhibitor of metalloproteinase-1 complex
MMP3-TIMP1
M3_T1
promatrix metalloproteinase-9
pM9
proMMP9
Catherine Lloyd
2008-07-08T00:00:00+00:00
2007-12-28