Generated Code
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/* There are a total of 3 entries in the algebraic variable array. There are a total of 3 entries in each of the rate and state variable arrays. There are a total of 8 entries in the constant variable array. */ /* * VOI is time in component environment (day). * CONSTANTS[0] is tau in component model_parameters (day). * CONSTANTS[1] is delta in component model_parameters (cells_per_day). * CONSTANTS[2] is np in component model_parameters (dimensionless). * CONSTANTS[3] is c in component model_parameters (virons_per_day). * CONSTANTS[4] is k in component model_parameters (ml_per_virons_per_day). * CONSTANTS[5] is N in component model_parameters (virons_per_cell). * CONSTANTS[6] is m in component model_parameters (per_day). * CONSTANTS[7] is T in component uninfected_T_cells (cells_per_ml). * STATES[0] is T_star in component infected_T_cells (cells_per_ml). * STATES[1] is VI in component infectious_virus (virons_per_ml). * ALGEBRAIC[0] is log_VI in component infectious_virus (dimensionless). * STATES[2] is VNI in component non_infectious_virus (virons_per_ml). * ALGEBRAIC[1] is virus_total in component total_virus (virons_per_ml). * ALGEBRAIC[2] is log_virus_total in component total_virus (dimensionless). * RATES[0] is d/dt T_star in component infected_T_cells (cells_per_ml). * RATES[1] is d/dt VI in component infectious_virus (virons_per_ml). * RATES[2] is d/dt VNI in component non_infectious_virus (virons_per_ml). */ void initConsts(double* CONSTANTS, double* RATES, double *STATES) { CONSTANTS[0] = 1.0; CONSTANTS[1] = 0.5; CONSTANTS[2] = 1; CONSTANTS[3] = 3; CONSTANTS[4] = 3.43e-5; CONSTANTS[5] = 480; CONSTANTS[6] = 0.01; STATES[0] = 3.6; STATES[1] = 134e3; STATES[2] = 0; CONSTANTS[7] = 180.000; } void computeRates(double VOI, double* CONSTANTS, double* RATES, double* STATES, double* ALGEBRAIC) { RATES[0] = CONSTANTS[4]*CONSTANTS[7]*STATES[1]*(VOI - CONSTANTS[0])*exp( - CONSTANTS[6]*CONSTANTS[0])*1.00000 - (CONSTANTS[1]/1.00000)*STATES[0]; RATES[1] = ( (1.00000 - CONSTANTS[2])*CONSTANTS[5]*CONSTANTS[1]*STATES[0])/1.00000 - ( CONSTANTS[3]*STATES[1])/1.00000; RATES[2] = ( CONSTANTS[2]*CONSTANTS[5]*CONSTANTS[1]*STATES[0])/1.00000 - ( CONSTANTS[3]*STATES[2])/1.00000; } void computeVariables(double VOI, double* CONSTANTS, double* RATES, double* STATES, double* ALGEBRAIC) { ALGEBRAIC[0] = arbitrary_log(STATES[1]/1.00000, 10); ALGEBRAIC[1] = STATES[1]+STATES[2]; ALGEBRAIC[2] = arbitrary_log(ALGEBRAIC[1]/1.00000, 10); }