/*
   There are a total of 1 entries in the algebraic variable array.
   There are a total of 16 entries in each of the rate and state variable arrays.
   There are a total of 20 entries in the constant variable array.
 */
/*
 * VOI is time in component environment (hour).
 * STATES[0] is x in component x (dimensionless).
 * CONSTANTS[0] is d in component model_parameters (first_order_rate_constant).
 * CONSTANTS[1] is gamma in component model_parameters (first_order_rate_constant).
 * CONSTANTS[2] is lambda in component model_parameters (first_order_rate_constant).
 * CONSTANTS[3] is beta in component model_parameters (first_order_rate_constant).
 * STATES[1] is v in component v (dimensionless).
 * STATES[2] is y0 in component y0 (dimensionless).
 * CONSTANTS[4] is a0 in component model_parameters (first_order_rate_constant).
 * CONSTANTS[5] is eta in component model_parameters (first_order_rate_constant).
 * CONSTANTS[6] is phi in component model_parameters (first_order_rate_constant).
 * STATES[3] is L in component L (dimensionless).
 * CONSTANTS[7] is pa in component model_parameters (first_order_rate_constant).
 * STATES[4] is za in component za (dimensionless).
 * CONSTANTS[8] is p_i in component model_parameters (first_order_rate_constant).
 * STATES[5] is zi in component zi (dimensionless).
 * STATES[6] is y1 in component y1 (dimensionless).
 * CONSTANTS[9] is a1 in component model_parameters (first_order_rate_constant).
 * CONSTANTS[10] is k in component model_parameters (first_order_rate_constant).
 * CONSTANTS[11] is u in component model_parameters (first_order_rate_constant).
 * STATES[7] is m_8 in component m_8 (dimensionless).
 * CONSTANTS[12] is r in component model_parameters (first_order_rate_constant).
 * STATES[8] is m_7 in component m_7 (dimensionless).
 * STATES[9] is m_6 in component m_6 (dimensionless).
 * STATES[10] is m_5 in component m_5 (dimensionless).
 * STATES[11] is m_4 in component m_4 (dimensionless).
 * STATES[12] is m_3 in component m_3 (dimensionless).
 * STATES[13] is m_2 in component m_2 (dimensionless).
 * STATES[14] is m_1 in component m_1 (dimensionless).
 * STATES[15] is m_0 in component m_0 (dimensionless).
 * CONSTANTS[13] is alpha in component model_parameters (first_order_rate_constant).
 * CONSTANTS[14] is ca in component model_parameters (first_order_rate_constant).
 * CONSTANTS[15] is ba in component model_parameters (first_order_rate_constant).
 * CONSTANTS[16] is xi in component model_parameters (first_order_rate_constant).
 * CONSTANTS[17] is ci in component model_parameters (first_order_rate_constant).
 * CONSTANTS[18] is bi in component model_parameters (first_order_rate_constant).
 * ALGEBRAIC[0] is log_zi in component zi (dimensionless).
 * CONSTANTS[19] is R0 in component R0 (dimensionless).
 * RATES[0] is d/dt x in component x (dimensionless).
 * RATES[2] is d/dt y0 in component y0 (dimensionless).
 * RATES[6] is d/dt y1 in component y1 (dimensionless).
 * RATES[3] is d/dt L in component L (dimensionless).
 * RATES[1] is d/dt v in component v (dimensionless).
 * RATES[7] is d/dt m_8 in component m_8 (dimensionless).
 * RATES[8] is d/dt m_7 in component m_7 (dimensionless).
 * RATES[9] is d/dt m_6 in component m_6 (dimensionless).
 * RATES[10] is d/dt m_5 in component m_5 (dimensionless).
 * RATES[11] is d/dt m_4 in component m_4 (dimensionless).
 * RATES[12] is d/dt m_3 in component m_3 (dimensionless).
 * RATES[13] is d/dt m_2 in component m_2 (dimensionless).
 * RATES[14] is d/dt m_1 in component m_1 (dimensionless).
 * RATES[15] is d/dt m_0 in component m_0 (dimensionless).
 * RATES[4] is d/dt za in component za (dimensionless).
 * RATES[5] is d/dt zi in component zi (dimensionless).
 */
void
initConsts(double* CONSTANTS, double* RATES, double *STATES)
{
STATES[0] = 1;
CONSTANTS[0] = 0.1;
CONSTANTS[1] = 0.5;
CONSTANTS[2] = 10;
CONSTANTS[3] = 0.1;
STATES[1] = 1;
STATES[2] = 0;
CONSTANTS[4] = 0.1;
CONSTANTS[5] = 0.01;
CONSTANTS[6] = 0.1;
STATES[3] = 0;
CONSTANTS[7] = 0.000001;
STATES[4] = 1;
CONSTANTS[8] = 1;
STATES[5] = 0.1;
STATES[6] = 0;
CONSTANTS[9] = 0.2;
CONSTANTS[10] = 1;
CONSTANTS[11] = 1;
STATES[7] = 0;
CONSTANTS[12] = 1;
STATES[8] = 0;
STATES[9] = 0;
STATES[10] = 0;
STATES[11] = 0;
STATES[12] = 0;
STATES[13] = 0;
STATES[14] = 0;
STATES[15] = 0;
CONSTANTS[13] = 0.2;
CONSTANTS[14] = 15.5;
CONSTANTS[15] = 0.1;
CONSTANTS[16] = 0.01;
CONSTANTS[17] = 12;
CONSTANTS[18] = 0.1;
CONSTANTS[19] =  (( CONSTANTS[2]*CONSTANTS[5])/( CONSTANTS[0]*CONSTANTS[9]*(CONSTANTS[4]+CONSTANTS[5])))*(CONSTANTS[3]+( CONSTANTS[1]*CONSTANTS[6])/(CONSTANTS[6]+CONSTANTS[0]));
}
void
computeRates(double VOI, double* CONSTANTS, double* RATES, double* STATES, double* ALGEBRAIC)
{
RATES[0] = CONSTANTS[2] - ( CONSTANTS[0]*STATES[0]+ CONSTANTS[3]*STATES[0]*STATES[1]+ CONSTANTS[1]*STATES[0]*STATES[1]);
RATES[2] = ( CONSTANTS[3]*STATES[0]*STATES[1] - ( CONSTANTS[4]*STATES[2]+ CONSTANTS[5]*STATES[2]+ CONSTANTS[7]*STATES[2]*STATES[4]+ CONSTANTS[8]*STATES[2]*STATES[5]))+ CONSTANTS[6]*STATES[3];
RATES[6] =  CONSTANTS[5]*STATES[2] - ( CONSTANTS[9]*STATES[6]+ CONSTANTS[7]*STATES[6]*STATES[4]+ CONSTANTS[8]*STATES[6]*STATES[5]);
RATES[3] =  CONSTANTS[1]*STATES[0]*STATES[1] - ( CONSTANTS[6]*STATES[3]+ CONSTANTS[0]*STATES[3]);
RATES[1] =  CONSTANTS[10]*STATES[6] -  CONSTANTS[11]*STATES[1];
RATES[7] =  2.00000*CONSTANTS[12]*STATES[8] -  CONSTANTS[12]*STATES[7];
RATES[8] =  2.00000*CONSTANTS[12]*STATES[9] -  CONSTANTS[12]*STATES[8];
RATES[9] =  2.00000*CONSTANTS[12]*STATES[10] -  CONSTANTS[12]*STATES[9];
RATES[10] =  2.00000*CONSTANTS[12]*STATES[11] -  CONSTANTS[12]*STATES[10];
RATES[11] =  2.00000*CONSTANTS[12]*STATES[12] -  CONSTANTS[12]*STATES[11];
RATES[12] =  2.00000*CONSTANTS[12]*STATES[13] -  CONSTANTS[12]*STATES[12];
RATES[13] =  2.00000*CONSTANTS[12]*STATES[14] -  CONSTANTS[12]*STATES[13];
RATES[14] =  2.00000*CONSTANTS[12]*STATES[15] -  CONSTANTS[12]*STATES[14];
RATES[15] =  - CONSTANTS[12]*STATES[15];
RATES[4] = ( CONSTANTS[13]*STATES[7]+ CONSTANTS[14]*(STATES[2]+STATES[6])*STATES[4]) -  CONSTANTS[15]*STATES[4];
RATES[5] = (CONSTANTS[16]+ CONSTANTS[17]*(STATES[2]+STATES[6])*STATES[5]) -  CONSTANTS[18]*STATES[5];
}
void
computeVariables(double VOI, double* CONSTANTS, double* RATES, double* STATES, double* ALGEBRAIC)
{
ALGEBRAIC[0] = arbitrary_log(STATES[5], 10);
}