/* There are a total of 1 entries in the algebraic variable array. There are a total of 16 entries in each of the rate and state variable arrays. There are a total of 20 entries in the constant variable array. */ /* * VOI is time in component environment (hour). * STATES[0] is x in component x (dimensionless). * CONSTANTS[0] is d in component model_parameters (first_order_rate_constant). * CONSTANTS[1] is gamma in component model_parameters (first_order_rate_constant). * CONSTANTS[2] is lambda in component model_parameters (first_order_rate_constant). * CONSTANTS[3] is beta in component model_parameters (first_order_rate_constant). * STATES[1] is v in component v (dimensionless). * STATES[2] is y0 in component y0 (dimensionless). * CONSTANTS[4] is a0 in component model_parameters (first_order_rate_constant). * CONSTANTS[5] is eta in component model_parameters (first_order_rate_constant). * CONSTANTS[6] is phi in component model_parameters (first_order_rate_constant). * STATES[3] is L in component L (dimensionless). * CONSTANTS[7] is pa in component model_parameters (first_order_rate_constant). * STATES[4] is za in component za (dimensionless). * CONSTANTS[8] is p_i in component model_parameters (first_order_rate_constant). * STATES[5] is zi in component zi (dimensionless). * STATES[6] is y1 in component y1 (dimensionless). * CONSTANTS[9] is a1 in component model_parameters (first_order_rate_constant). * CONSTANTS[10] is k in component model_parameters (first_order_rate_constant). * CONSTANTS[11] is u in component model_parameters (first_order_rate_constant). * STATES[7] is m_8 in component m_8 (dimensionless). * CONSTANTS[12] is r in component model_parameters (first_order_rate_constant). * STATES[8] is m_7 in component m_7 (dimensionless). * STATES[9] is m_6 in component m_6 (dimensionless). * STATES[10] is m_5 in component m_5 (dimensionless). * STATES[11] is m_4 in component m_4 (dimensionless). * STATES[12] is m_3 in component m_3 (dimensionless). * STATES[13] is m_2 in component m_2 (dimensionless). * STATES[14] is m_1 in component m_1 (dimensionless). * STATES[15] is m_0 in component m_0 (dimensionless). * CONSTANTS[13] is alpha in component model_parameters (first_order_rate_constant). * CONSTANTS[14] is ca in component model_parameters (first_order_rate_constant). * CONSTANTS[15] is ba in component model_parameters (first_order_rate_constant). * CONSTANTS[16] is xi in component model_parameters (first_order_rate_constant). * CONSTANTS[17] is ci in component model_parameters (first_order_rate_constant). * CONSTANTS[18] is bi in component model_parameters (first_order_rate_constant). * ALGEBRAIC[0] is log_zi in component zi (dimensionless). * CONSTANTS[19] is R0 in component R0 (dimensionless). * RATES[0] is d/dt x in component x (dimensionless). * RATES[2] is d/dt y0 in component y0 (dimensionless). * RATES[6] is d/dt y1 in component y1 (dimensionless). * RATES[3] is d/dt L in component L (dimensionless). * RATES[1] is d/dt v in component v (dimensionless). * RATES[7] is d/dt m_8 in component m_8 (dimensionless). * RATES[8] is d/dt m_7 in component m_7 (dimensionless). * RATES[9] is d/dt m_6 in component m_6 (dimensionless). * RATES[10] is d/dt m_5 in component m_5 (dimensionless). * RATES[11] is d/dt m_4 in component m_4 (dimensionless). * RATES[12] is d/dt m_3 in component m_3 (dimensionless). * RATES[13] is d/dt m_2 in component m_2 (dimensionless). * RATES[14] is d/dt m_1 in component m_1 (dimensionless). * RATES[15] is d/dt m_0 in component m_0 (dimensionless). * RATES[4] is d/dt za in component za (dimensionless). * RATES[5] is d/dt zi in component zi (dimensionless). * There are a total of 0 condition variables. */ void initConsts(double* CONSTANTS, double* RATES, double *STATES) { STATES[0] = 1; CONSTANTS[0] = 0.1; CONSTANTS[1] = 0.5; CONSTANTS[2] = 10; CONSTANTS[3] = 0.1; STATES[1] = 1; STATES[2] = 0; CONSTANTS[4] = 0.1; CONSTANTS[5] = 0.01; CONSTANTS[6] = 0.1; STATES[3] = 0; CONSTANTS[7] = 0.000001; STATES[4] = 1; CONSTANTS[8] = 1; STATES[5] = 0.1; STATES[6] = 0; CONSTANTS[9] = 0.2; CONSTANTS[10] = 1; CONSTANTS[11] = 1; STATES[7] = 0; CONSTANTS[12] = 1; STATES[8] = 0; STATES[9] = 0; STATES[10] = 0; STATES[11] = 0; STATES[12] = 0; STATES[13] = 0; STATES[14] = 0; STATES[15] = 0; CONSTANTS[13] = 0.2; CONSTANTS[14] = 15.5; CONSTANTS[15] = 0.1; CONSTANTS[16] = 0.01; CONSTANTS[17] = 12; CONSTANTS[18] = 0.1; CONSTANTS[19] = (( CONSTANTS[2]*CONSTANTS[5])/( CONSTANTS[0]*CONSTANTS[9]*(CONSTANTS[4]+CONSTANTS[5])))*(CONSTANTS[3]+( CONSTANTS[1]*CONSTANTS[6])/(CONSTANTS[6]+CONSTANTS[0])); RATES[0] = 0.1001; RATES[2] = 0.1001; RATES[6] = 0.1001; RATES[3] = 0.1001; RATES[1] = 0.1001; RATES[7] = 0.1001; RATES[8] = 0.1001; RATES[9] = 0.1001; RATES[10] = 0.1001; RATES[11] = 0.1001; RATES[12] = 0.1001; RATES[13] = 0.1001; RATES[14] = 0.1001; RATES[15] = 0.1001; RATES[4] = 0.1001; RATES[5] = 0.1001; } void computeResiduals(double VOI, double* CONSTANTS, double* RATES, double* OLDRATES, double* STATES, double* OLDSTATES, double* ALGEBRAIC, double* CONDVARS) { resid[0] = RATES[0] - CONSTANTS[2] - ( CONSTANTS[0]*STATES[0]+ CONSTANTS[3]*STATES[0]*STATES[1]+ CONSTANTS[1]*STATES[0]*STATES[1]); resid[1] = RATES[2] - ( CONSTANTS[3]*STATES[0]*STATES[1] - ( CONSTANTS[4]*STATES[2]+ CONSTANTS[5]*STATES[2]+ CONSTANTS[7]*STATES[2]*STATES[4]+ CONSTANTS[8]*STATES[2]*STATES[5]))+ CONSTANTS[6]*STATES[3]; resid[2] = RATES[6] - CONSTANTS[5]*STATES[2] - ( CONSTANTS[9]*STATES[6]+ CONSTANTS[7]*STATES[6]*STATES[4]+ CONSTANTS[8]*STATES[6]*STATES[5]); resid[3] = RATES[3] - CONSTANTS[1]*STATES[0]*STATES[1] - ( CONSTANTS[6]*STATES[3]+ CONSTANTS[0]*STATES[3]); resid[4] = RATES[1] - CONSTANTS[10]*STATES[6] - CONSTANTS[11]*STATES[1]; resid[5] = RATES[7] - 2.00000*CONSTANTS[12]*STATES[8] - CONSTANTS[12]*STATES[7]; resid[6] = RATES[8] - 2.00000*CONSTANTS[12]*STATES[9] - CONSTANTS[12]*STATES[8]; resid[7] = RATES[9] - 2.00000*CONSTANTS[12]*STATES[10] - CONSTANTS[12]*STATES[9]; resid[8] = RATES[10] - 2.00000*CONSTANTS[12]*STATES[11] - CONSTANTS[12]*STATES[10]; resid[9] = RATES[11] - 2.00000*CONSTANTS[12]*STATES[12] - CONSTANTS[12]*STATES[11]; resid[10] = RATES[12] - 2.00000*CONSTANTS[12]*STATES[13] - CONSTANTS[12]*STATES[12]; resid[11] = RATES[13] - 2.00000*CONSTANTS[12]*STATES[14] - CONSTANTS[12]*STATES[13]; resid[12] = RATES[14] - 2.00000*CONSTANTS[12]*STATES[15] - CONSTANTS[12]*STATES[14]; resid[13] = RATES[15] - - CONSTANTS[12]*STATES[15]; resid[14] = RATES[4] - ( CONSTANTS[13]*STATES[7]+ CONSTANTS[14]*(STATES[2]+STATES[6])*STATES[4]) - CONSTANTS[15]*STATES[4]; resid[15] = RATES[5] - (CONSTANTS[16]+ CONSTANTS[17]*(STATES[2]+STATES[6])*STATES[5]) - CONSTANTS[18]*STATES[5]; } void computeVariables(double VOI, double* CONSTANTS, double* RATES, double* STATES, double* ALGEBRAIC) { ALGEBRAIC[0] = arbitrary_log(STATES[5], 10); } void computeEssentialVariables(double VOI, double* CONSTANTS, double* RATES, double* STATES, double* ALGEBRAIC) { } void getStateInformation(double* SI) { SI[0] = 1.0; SI[1] = 1.0; SI[2] = 1.0; SI[3] = 1.0; SI[4] = 1.0; SI[5] = 1.0; SI[6] = 1.0; SI[7] = 1.0; SI[8] = 1.0; SI[9] = 1.0; SI[10] = 1.0; SI[11] = 1.0; SI[12] = 1.0; SI[13] = 1.0; SI[14] = 1.0; SI[15] = 1.0; } void computeRoots(double VOI, double* CONSTANTS, double* RATES, double* OLDRATES, double* STATES, double* OLDSTATES, double* ALGEBRAIC, double* CONDVARS) { }