Generated Code
The following is c_ida code generated by the CellML API from this CellML file. (Back to language selection)
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/* There are a total of 6 entries in the algebraic variable array. There are a total of 3 entries in each of the rate and state variable arrays. There are a total of 9 entries in the constant variable array. */ /* * VOI is time in component environment (day). * STATES[0] is x1 in component x1 (cell). * CONSTANTS[0] is alpha1 in component model_parameters (flux). * CONSTANTS[1] is beta1 in component model_parameters (first_order_rate_constant). * CONSTANTS[2] is g11 in component model_parameters (dimensionless). * ALGEBRAIC[0] is g21 in component model_parameters (dimensionless). * STATES[1] is x2 in component x2 (cell). * CONSTANTS[3] is alpha2 in component model_parameters (first_order_rate_constant). * CONSTANTS[4] is beta2 in component model_parameters (first_order_rate_constant). * CONSTANTS[5] is g12 in component model_parameters (dimensionless). * CONSTANTS[6] is g22 in component model_parameters (dimensionless). * STATES[2] is z in component z (percent). * CONSTANTS[7] is k1 in component model_parameters (percent_per_cell_per_day). * CONSTANTS[8] is k2 in component model_parameters (percent_per_cell_per_day). * ALGEBRAIC[4] is y1 in component y1 (cell). * ALGEBRAIC[5] is y2 in component y2 (cell). * ALGEBRAIC[2] is x1_bar in component x1_bar (cell). * ALGEBRAIC[3] is x2_bar in component x2_bar (cell). * ALGEBRAIC[1] is gamma in component model_parameters (dimensionless). * RATES[0] is d/dt x1 in component x1 (cell). * RATES[1] is d/dt x2 in component x2 (cell). * RATES[2] is d/dt z in component z (percent). * There are a total of 4 condition variables. */ void initConsts(double* CONSTANTS, double* RATES, double *STATES) { STATES[0] = 10.06066; CONSTANTS[0] = 3; CONSTANTS[1] = 0.2; CONSTANTS[2] = 0.5; STATES[1] = 212.132; CONSTANTS[3] = 4; CONSTANTS[4] = 0.02; CONSTANTS[5] = 1; CONSTANTS[6] = 0; STATES[2] = 100.0; CONSTANTS[7] = 0.24; CONSTANTS[8] = 0.0017; RATES[0] = 0.1001; RATES[1] = 0.1001; RATES[2] = 0.1001; } void computeResiduals(double VOI, double* CONSTANTS, double* RATES, double* OLDRATES, double* STATES, double* OLDSTATES, double* ALGEBRAIC, double* CONDVARS) { resid[0] = RATES[0] - CONSTANTS[0]*pow(STATES[0], CONSTANTS[2])*pow(STATES[1], ALGEBRAIC[0]) - CONSTANTS[1]*STATES[0]; resid[1] = RATES[1] - CONSTANTS[3]*pow(STATES[0], CONSTANTS[5])*pow(STATES[1], CONSTANTS[6]) - CONSTANTS[4]*STATES[1]; resid[2] = RATES[2] - CONSTANTS[8]*ALGEBRAIC[5] - CONSTANTS[7]*ALGEBRAIC[4]; } void computeVariables(double VOI, double* CONSTANTS, double* RATES, double* STATES, double* ALGEBRAIC) { } void computeEssentialVariables(double VOI, double* CONSTANTS, double* RATES, double* STATES, double* ALGEBRAIC) { ALGEBRAIC[0] = (CONDVAR[2]>=0.00000&&CONDVAR[3]<0.00000 ? 0.150000 : -0.500000); ALGEBRAIC[1] = CONSTANTS[5]*ALGEBRAIC[0] - (1.00000 - CONSTANTS[2])*(1.00000 - CONSTANTS[6]); ALGEBRAIC[2] = pow(CONSTANTS[1]/CONSTANTS[0], (1.00000 - CONSTANTS[6])/ALGEBRAIC[1])*pow(CONSTANTS[4]/CONSTANTS[3], ALGEBRAIC[0]/ALGEBRAIC[1]); ALGEBRAIC[4] = (CONDVAR[0]>0.00000 ? STATES[0] - ALGEBRAIC[2] : 0.00000); ALGEBRAIC[3] = pow(CONSTANTS[1]/CONSTANTS[0], CONSTANTS[5]/ALGEBRAIC[1])*pow(CONSTANTS[4]/CONSTANTS[3], (1.00000 - CONSTANTS[2])/ALGEBRAIC[1]); ALGEBRAIC[5] = (CONDVAR[1]>0.00000 ? STATES[1] - ALGEBRAIC[3] : 0.00000); } void getStateInformation(double* SI) { SI[0] = 1.0; SI[1] = 1.0; SI[2] = 1.0; } void computeRoots(double VOI, double* CONSTANTS, double* RATES, double* OLDRATES, double* STATES, double* OLDSTATES, double* ALGEBRAIC, double* CONDVARS) { CONDVAR[0] = STATES[0] - ALGEBRAIC[2]; CONDVAR[1] = STATES[1] - ALGEBRAIC[3]; CONDVAR[2] = VOI - 1.00000; CONDVAR[3] = VOI - 2.00000; }