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C C There are a total of 21 entries in the algebraic variable array. C There are a total of 11 entries in each of the rate and state variable arrays. C There are a total of 33 entries in the constant variable array. C C C VOI is time in component environment (minute). C CONSTS(1) is k1 in component rate_constants (first_order_rate_constant). C CONSTS(2) is k1_ in component rate_constants (first_order_rate_constant). C CONSTS(3) is k1__ in component rate_constants (first_order_rate_constant). C CONSTS(4) is kn1 in component rate_constants (first_order_rate_constant). C CONSTS(5) is k2 in component rate_constants (first_order_rate_constant). C CONSTS(6) is kn2 in component rate_constants (first_order_rate_constant). C CONSTS(7) is k3 in component rate_constants (first_order_rate_constant). C CONSTS(8) is k3_ in component rate_constants (first_order_rate_constant). C CONSTS(9) is kn4 in component rate_constants (first_order_rate_constant). C CONSTS(10) is k5 in component rate_constants (first_order_rate_constant). C CONSTS(11) is kn6 in component rate_constants (first_order_rate_constant). C CONSTS(12) is k8 in component rate_constants (first_order_rate_constant). C CONSTS(13) is k9 in component rate_constants (first_order_rate_constant). C CONSTS(14) is k10 in component rate_constants (first_order_rate_constant). C CONSTS(15) is k17 in component rate_constants (first_order_rate_constant). C CONSTS(16) is k18 in component rate_constants (first_order_rate_constant). C CONSTS(17) is k19 in component rate_constants (first_order_rate_constant). C CONSTS(18) is k20 in component rate_constants (first_order_rate_constant). C CONSTS(19) is k21 in component rate_constants (first_order_rate_constant). C CONSTS(20) is k22 in component rate_constants (first_order_rate_constant). C CONSTS(21) is k24 in component rate_constants (first_order_rate_constant). C CONSTS(22) is k25 in component rate_constants (first_order_rate_constant). C CONSTS(23) is k25_ in component rate_constants (first_order_rate_constant). C CONSTS(24) is k26 in component rate_constants (first_order_rate_constant). C CONSTS(25) is k26_ in component rate_constants (first_order_rate_constant). C CONSTS(26) is k28 in component rate_constants (first_order_rate_constant). C CONSTS(27) is k29 in component rate_constants (first_order_rate_constant). C STATES(1) is a_CyclinE_Cdk2 in component a_CyclinE_Cdk2 (dimensionless). C ALGBRC(1) is V_2 in component V_2 (first_order_rate_constant). C ALGBRC(14) is V_10 in component V_10 (first_order_rate_constant). C ALGBRC(3) is V_n2 in component V_n2 (first_order_rate_constant). C ALGBRC(13) is V_9 in component V_9 (first_order_rate_constant). C ALGBRC(15) is V_21 in component V_21 (first_order_rate_constant). C STATES(2) is i_CyclinE_Cdk2 in component i_CyclinE_Cdk2 (dimensionless). C ALGBRC(6) is V_3 in component V_3 (first_order_rate_constant). C ALGBRC(10) is V_5 in component V_5 (first_order_rate_constant). C STATES(3) is pRB_E2F in component pRB_E2F (dimensionless). C CONSTS(33) is V_n1 in component V_n1 (first_order_rate_constant). C ALGBRC(2) is V_1 in component V_1 (first_order_rate_constant). C STATES(4) is E2F in component E2F (dimensionless). C CONSTS(28) is V_4 in component E2F (first_order_rate_constant). C ALGBRC(7) is V_18 in component V_18 (first_order_rate_constant). C ALGBRC(4) is V_n4 in component V_n4 (first_order_rate_constant). C STATES(5) is pRB in component pRB (dimensionless). C CONSTS(29) is V_27 in component pRB (first_order_rate_constant). C ALGBRC(5) is V_26 in component V_26 (first_order_rate_constant). C ALGBRC(11) is V_29 in component V_29 (first_order_rate_constant). C ALGBRC(8) is V_28 in component V_28 (first_order_rate_constant). C STATES(6) is CycD_Cdk4 in component CycD_Cdk4 (dimensionless). C CONSTS(30) is V_6 in component CycD_Cdk4 (first_order_rate_constant). C ALGBRC(19) is V_20 in component V_20 (first_order_rate_constant). C ALGBRC(9) is V_n6 in component V_n6 (first_order_rate_constant). C ALGBRC(17) is V_19 in component V_19 (first_order_rate_constant). C ALGBRC(16) is V_17 in component V_17 (first_order_rate_constant). C STATES(7) is p27 in component p27 (dimensionless). C CONSTS(31) is V_7 in component p27 (first_order_rate_constant). C ALGBRC(12) is V_8 in component V_8 (first_order_rate_constant). C ALGBRC(21) is V_22 in component V_22 (first_order_rate_constant). C STATES(8) is CycE_Cdk2_p27 in component CycE_Cdk2_p27 (dimensionless). C STATES(9) is CycD_Cdk4_p27 in component CycD_Cdk4_p27 (dimensionless). C STATES(10) is p16 in component p16 (dimensionless). C CONSTS(32) is V_23 in component p16 (first_order_rate_constant). C ALGBRC(20) is V_25 in component V_25 (first_order_rate_constant). C ALGBRC(18) is V_24 in component V_24 (first_order_rate_constant). C STATES(11) is pRB_P in component pRB_P (dimensionless). C RATES(1) is d/dt a_CyclinE_Cdk2 in component a_CyclinE_Cdk2 (dimensionless). C RATES(2) is d/dt i_CyclinE_Cdk2 in component i_CyclinE_Cdk2 (dimensionless). C RATES(3) is d/dt pRB_E2F in component pRB_E2F (dimensionless). C RATES(4) is d/dt E2F in component E2F (dimensionless). C RATES(5) is d/dt pRB in component pRB (dimensionless). C RATES(6) is d/dt CycD_Cdk4 in component CycD_Cdk4 (dimensionless). C RATES(7) is d/dt p27 in component p27 (dimensionless). C RATES(8) is d/dt CycE_Cdk2_p27 in component CycE_Cdk2_p27 (dimensionless). C RATES(9) is d/dt CycD_Cdk4_p27 in component CycD_Cdk4_p27 (dimensionless). C RATES(10) is d/dt p16 in component p16 (dimensionless). C RATES(11) is d/dt pRB_P in component pRB_P (dimensionless). C SUBROUTINE initConsts(CONSTS, RATES, STATES) REAL CONSTS(*), RATES(*), STATES(*) CONSTS(1) = 0.1 CONSTS(2) = 0.5 CONSTS(3) = 0.5 CONSTS(4) = 0.001 CONSTS(5) = 0.1 CONSTS(6) = 1 CONSTS(7) = 1.42 CONSTS(8) = 0 CONSTS(9) = 0.016 CONSTS(10) = 0.02 CONSTS(11) = 5 CONSTS(12) = 2 CONSTS(13) = 2 CONSTS(14) = 0.035 CONSTS(15) = 3.5 CONSTS(16) = 0.0001 CONSTS(17) = 0.05 CONSTS(18) = 0.01 CONSTS(19) = 0.1 CONSTS(20) = 0.001 CONSTS(21) = 0.1 CONSTS(22) = 0.01 CONSTS(23) = 0.02 CONSTS(24) = 0.01 CONSTS(25) = 0.1 CONSTS(26) = 0.01 CONSTS(27) = 0.001 STATES(1) = 0 STATES(2) = 0.01 STATES(3) = 1.95 STATES(4) = 0 CONSTS(28) = 0.000001 STATES(5) = 0.05 CONSTS(29) = 0.01 STATES(6) = 0 CONSTS(30) = 0.018 STATES(7) = 5 CONSTS(31) = 0.0001 STATES(8) = 1 STATES(9) = 0 STATES(10) = 5 CONSTS(32) = 0.2 STATES(11) = 0.01 CONSTS(33) = CONSTS(4) RETURN END SUBROUTINE computeRates(VOI, CONSTS, RATES, STATES, ALGBRC) REAL VOI, CONSTS(*), RATES(*), STATES(*), ALGBRC(*) ALGBRC(2) = CONSTS(2)*STATES(6)*STATES(3)+ CONSTS(3)*STATES(9)*STATES(3)+ CONSTS(1)*STATES(1)*STATES(3) RATES(3) = CONSTS(33) - ALGBRC(2) ALGBRC(7) = CONSTS(16)*STATES(4) ALGBRC(4) = CONSTS(9)*STATES(4) RATES(4) = (ALGBRC(2)+CONSTS(28)+ALGBRC(7)) - (CONSTS(33)+ALGBRC(4)) ALGBRC(1) = CONSTS(5)*STATES(1)*STATES(2) ALGBRC(3) = CONSTS(6)*STATES(1) ALGBRC(6) = CONSTS(7)*STATES(4)+CONSTS(8) ALGBRC(10) = CONSTS(10)*STATES(2) RATES(2) = (ALGBRC(6)+ALGBRC(3)) - (ALGBRC(1)+ALGBRC(10)) ALGBRC(5) = CONSTS(24)/( (1.00000+ CONSTS(25)*STATES(10))*1.00000) ALGBRC(11) = CONSTS(27)*STATES(11) ALGBRC(8) = CONSTS(26)*STATES(5) RATES(5) = (CONSTS(29)+ALGBRC(5)+ALGBRC(11)) - (CONSTS(33)+ALGBRC(8)) RATES(11) = ALGBRC(2) - ALGBRC(11) ALGBRC(14) = CONSTS(14)*STATES(8) ALGBRC(13) = CONSTS(13)*STATES(7)*STATES(1) RATES(8) = ALGBRC(13) - ALGBRC(14) ALGBRC(15) = CONSTS(19)*STATES(1) ** 2.00000 RATES(1) = (ALGBRC(1)+ALGBRC(14)) - (ALGBRC(3)+ALGBRC(13)+ALGBRC(15)) ALGBRC(19) = CONSTS(18)*STATES(9) ALGBRC(9) = CONSTS(11)*STATES(6) ALGBRC(17) = CONSTS(17)*STATES(7)*STATES(6) ALGBRC(16) = CONSTS(15)*STATES(10)*STATES(6) RATES(6) = (CONSTS(30)+ALGBRC(19)) - (ALGBRC(9)+ALGBRC(17)+ALGBRC(16)) RATES(9) = ALGBRC(17) - ALGBRC(19) ALGBRC(20) = CONSTS(22)/( (1.00000+ CONSTS(23)*STATES(5))*1.00000) ALGBRC(18) = CONSTS(21)*STATES(10) RATES(10) = (CONSTS(32)+ALGBRC(20)) - (ALGBRC(16)+ALGBRC(18)) ALGBRC(12) = CONSTS(12)*STATES(7)*STATES(1) ALGBRC(21) = CONSTS(20)*STATES(7) RATES(7) = (CONSTS(31)+ALGBRC(14)+ALGBRC(19)) - (ALGBRC(12)+ALGBRC(13)+ALGBRC(17)+ALGBRC(21)) RETURN END SUBROUTINE computeVariables(VOI, CONSTS, RATES, STATES, ALGBRC) REAL VOI, CONSTS(*), RATES(*), STATES(*), ALGBRC(*) ALGBRC(2) = CONSTS(2)*STATES(6)*STATES(3)+ CONSTS(3)*STATES(9)*STATES(3)+ CONSTS(1)*STATES(1)*STATES(3) ALGBRC(7) = CONSTS(16)*STATES(4) ALGBRC(4) = CONSTS(9)*STATES(4) ALGBRC(1) = CONSTS(5)*STATES(1)*STATES(2) ALGBRC(3) = CONSTS(6)*STATES(1) ALGBRC(6) = CONSTS(7)*STATES(4)+CONSTS(8) ALGBRC(10) = CONSTS(10)*STATES(2) ALGBRC(5) = CONSTS(24)/( (1.00000+ CONSTS(25)*STATES(10))*1.00000) ALGBRC(11) = CONSTS(27)*STATES(11) ALGBRC(8) = CONSTS(26)*STATES(5) ALGBRC(14) = CONSTS(14)*STATES(8) ALGBRC(13) = CONSTS(13)*STATES(7)*STATES(1) ALGBRC(15) = CONSTS(19)*STATES(1) ** 2.00000 ALGBRC(19) = CONSTS(18)*STATES(9) ALGBRC(9) = CONSTS(11)*STATES(6) ALGBRC(17) = CONSTS(17)*STATES(7)*STATES(6) ALGBRC(16) = CONSTS(15)*STATES(10)*STATES(6) ALGBRC(20) = CONSTS(22)/( (1.00000+ CONSTS(23)*STATES(5))*1.00000) ALGBRC(18) = CONSTS(21)*STATES(10) ALGBRC(12) = CONSTS(12)*STATES(7)*STATES(1) ALGBRC(21) = CONSTS(20)*STATES(7) RETURN END