Location: Virtual Bacterial Photography @ fb8422a520b9 / ompC_lacZ_Promoter.cellml

Author:
Tommy Yu <tommy.yu@auckland.ac.nz>
Date:
2011-06-16 15:08:26+12:00
Desc:
Removed extra <br> in title.
Permanent Source URI:
https://models.cellml.org/w/mcoo001/virtualbacterialphotography/rawfile/fb8422a520b9635b0903bc7595334305ef205e3a/ompC_lacZ_Promoter.cellml
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<?xml version="1.0"?>
<model xmlns="http://www.cellml.org/cellml/1.1#" xmlns:cmeta="http://www.cellml.org/metadata/1.0#" cmeta:id="ompC_lacZ_Promoter" name="ompC_lacZ_Promoter">
            
    <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
            <rdf:Description rdf:about="#ompC_lacZ_Promoter">
            <dc:creator xmlns:dc="http://purl.org/dc/elements/1.0/">
            <vCard:N xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" rdf:parseType="Resource">
                <vCard:Family>Cooling</vCard:Family>
                <vCard:Given>Mike</vCard:Given>
            </vCard:N>
            <vCard:EMAIL xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" rdf:parseType="Resource">
                <rdf:value>m.cooling@auckland.ac.nz</rdf:value>
                <rdf:type rdf:resource="http://imc.org/vCard/3.0#internet"/>
            </vCard:EMAIL>
            <vCard:ORG xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" rdf:parseType="Resource">
                <vCard:Orgname>Auckland Bioengineering Institute</vCard:Orgname>
                <vCard:Orgunit>University of Auckland</vCard:Orgunit>
            </vCard:ORG>
            </dc:creator>
            </rdf:Description>
   </rdf:RDF>

  <import xmlns:xlink="http://www.w3.org/1999/xlink" xlink:href="svp_templates/Template_Promoter_PartiallyInductive.cellml">
    <units name="femtoliter" units_ref="femtoliter"/>
    <units name="nM_per_s" units_ref="nM_per_s"/>
    <units name="nM" units_ref="nM"/>
    <units name="PoPs" units_ref="PoPs"/>
    <component component_ref="Template_Promoter_PartiallyInductive" name="Template_Promoter_PartiallyInductive"/>
  </import>

   <component name="ompC_lacZ_Promoter">
    <variable name="localVolume" private_interface="out" public_interface="in" units="femtoliter"/>
    <variable initial_value="3" name="k" private_interface="out" units="PoPs"/>
    <variable initial_value="100" name="Km" private_interface="out" units="nM"/>
    <variable initial_value="0.1" name="basalProportion" private_interface="out" units="dimensionless"/>
    <variable initial_value="1" name="n" private_interface="out" units="dimensionless"/>
    <variable name="JRNA" private_interface="in" public_interface="out" units="nM_per_s"/>
    <variable name="tFactor" private_interface="in" public_interface="out" units="nM"/>
   </component>
 
   <group>
    <relationship_ref relationship="encapsulation"/>
    <component_ref component="ompC_lacZ_Promoter">
      <component_ref component="Template_Promoter_PartiallyInductive"/>
    </component_ref>
   </group> 
  
   

<connection><map_components component_1="ompC_lacZ_Promoter" component_2="Template_Promoter_PartiallyInductive"/>
<map_variables variable_1="localVolume" variable_2="localVolume"/>
<map_variables variable_1="k" variable_2="k"/>
<map_variables variable_1="basalProportion" variable_2="basalProportion"/>
<map_variables variable_1="tFactor" variable_2="tFactor"/>
<map_variables variable_1="n" variable_2="n"/>
<map_variables variable_1="Km" variable_2="Km"/>
<map_variables variable_1="JRNA" variable_2="JRNA"/></connection></model>