Location: mRNA expression levels in failing human hearts predict cellular electrophysiological remodeling: A population-based simulation study @ 465bfd3062a8 / action-potential.xml

Author:
Dougal Cowan <devnull@localhost>
Date:
2012-08-17 09:22:03+12:00
Desc:
Perhaps the last attempt to get the metadata working
Permanent Source URI:
https://models.cellml.org/w/miller/Walmsley_Rodriguez_2013/rawfile/465bfd3062a87e0310968bce074d7dd384305e76/action-potential.xml

<?xml version="1.0" encoding="utf-8"?>
<sedML  xmlns="http://sed-ml.org/" xmlns:cellml="http://www.cellml.org/cellml/1.0#" xmlns:cmeta="http://www.cellml.org/metadata/1.1#" xmlns:math="http://www.w3.org/1998/Math/MathML" level="1" version="1">
 <listOfSimulations>
   <uniformTimeCourse id="simulation1" 
    initialTime="0" outputStartTime="0" outputEndTime="1000" 
    numberOfPoints="2500" >
     <algorithm kisaoID="KISAO:0000019"/>
    </uniformTimeCourse>
 </listOfSimulations>
 <listOfModels>
  <model id="model1" name="ORd" language="urn:sedml:language:cellml" source="Ohara_Rudy_2011.cellml"/>
 </listOfModels>
 
  <listOfTasks>
    <task id="task1" name="Action Potential" modelReference="model1" simulationReference="simulation1"/>
  </listOfTasks>
  <listOfDataGenerators>
    <dataGenerator id="time" name="time">
      <listOfVariables>
        <variable id="t" taskReference="task1" target="/cellml:model/cellml:component[@name='environment']/cellml:variable[@name='time']" />
      </listOfVariables>
      <math:math>
        <math:ci>t</math:ci>
      </math:math>
    </dataGenerator>
    
    <dataGenerator id="Vm" name="Membrane Potential">
      <listOfVariables>
        <variable id="v" taskReference="task1" target="/cellml:model/cellml:component[@name='membrane']/cellml:variable[@name='v']" />
      </listOfVariables>
      <math:math>
        <math:ci>v</math:ci>
      </math:math>
    </dataGenerator>
  </listOfDataGenerators>
  
  <listOfOutputs>
    <plot2D id="plot1" name="Action Potential">
      <listOfCurves>
        <curve id="c1" logX="false" logY="false" xDataReference="time" yDataReference="Vm" />
      </listOfCurves>
    </plot2D>
  </listOfOutputs>
</sedML>