Location: semantic-annotation @ 273e7c2b8b3b / protocol2_mackenzie_1996.sedml

Author:
Dewan Sarwar <dsar941@UoA.auckland.ac.nz>
Date:
2019-11-19 10:27:33+13:00
Desc:
two categories of RDFs to disocver protocolwise SEDML models
Permanent Source URI:
https://models.cellml.org/workspace/267/rawfile/273e7c2b8b3b205ec9edb8454ce0748768739539/protocol2_mackenzie_1996.sedml

<?xml version='1.0' encoding='UTF-8'?>
<sedML level="1" version="3" xmlns="http://sed-ml.org/sed-ml/level1/version3" xmlns:cellml="http://www.cellml.org/cellml/1.1#">
    <listOfSimulations>
        <uniformTimeCourse id="simulation1" initialTime="0" numberOfPoints="1000" outputEndTime="1000" outputStartTime="0">
            <algorithm kisaoID="KISAO:0000019"></algorithm>
        </uniformTimeCourse>
    </listOfSimulations>
    <listOfModels>
        <model id="model" language="urn:sedml:language:cellml.1_1" source="mackenzie_1996.cellml"/>
    </listOfModels>
    <listOfTasks>
        <repeatedTask id="repeatedTask" range="once" resetModel="true">
            <listOfRanges>
                <vectorRange id="once">
                    <value> 1 </value>
                </vectorRange>
            </listOfRanges>
            <listOfSubTasks>
                <subTask order="1" task="task1"/>
            </listOfSubTasks>
        </repeatedTask>
        <task id="task1" modelReference="model" simulationReference="simulation1"/>
    </listOfTasks>
    <listOfDataGenerators>
        <dataGenerator id="xDataGenerator1_1">
            <listOfVariables>
                <variable id="xProtocol2" target="/cellml:model/cellml:component[@name='environment']/cellml:variable[@name='time']" taskReference="repeatedTask"/>
            </listOfVariables>
            <math xmlns="http://www.w3.org/1998/Math/MathML">
                <ci> xProtocol2 </ci>
            </math>
        </dataGenerator>
        <dataGenerator id="yDataGenerator1_1">
            <listOfVariables>
                <variable id="yProtocol2" target="/cellml:model/cellml:component[@name='ion_concentrations']/cellml:variable[@name='V']" taskReference="repeatedTask"/>
            </listOfVariables>
            <math xmlns="http://www.w3.org/1998/Math/MathML">
                <ci> yProtocol2 </ci>
            </math>
        </dataGenerator>
    </listOfDataGenerators>
    <listOfOutputs>
        <plot2D id="plot1">
            <listOfCurves>
                <curve id="curve1_1" logX="false" logY="false" xDataReference="xDataGenerator1_1" yDataReference="yDataGenerator1_1"></curve>
            </listOfCurves>
        </plot2D>
    </listOfOutputs>
</sedML>