- Author:
- Dewan Sarwar <dsar941@UoA.auckland.ac.nz>
- Date:
- 2020-06-25 21:17:52+12:00
- Desc:
- annotations changed for mackenzie model
- Permanent Source URI:
- https://models.cellml.org/workspace/267/rawfile/92367a08b2bb9612257ef3f32b6823adf5e0d53b/SEDML/1J_chang_fujita_b_1999.rdf
<rdf:RDF xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"
xmlns:ro="http://www.obofoundry.org/ro/ro.owl#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:semsim="http://www.bhi.washington.edu/SemSim#"
xmlns:dcterms="http://purl.org/dc/terms/">
<rdf:Description rdf:about="protocol1J_chang_fujita_b_1999.sedml#mc_sodium_flux.C_m_Na">
<semsim:isComputationalComponentFor>
<rdf:Description rdf:about="#property_4">
<semsim:physicalPropertyOf>
<rdf:Description rdf:about="#entity_0">
<ro:part_of>
<rdf:Description rdf:about="#entity_1">
<semsim:hasPhysicalDefinition rdf:resource="http://purl.obolibrary.org/obo/FMA_280791"/>
</rdf:Description>
</ro:part_of>
<semsim:hasPhysicalDefinition rdf:resource="http://purl.obolibrary.org/obo/CHEBI_29101"/>
</rdf:Description>
</semsim:physicalPropertyOf>
<semsim:hasPhysicalDefinition rdf:resource="http://identifiers.org/opb/OPB_00340"/>
</rdf:Description>
</semsim:isComputationalComponentFor>
<dcterms:description>Concentration of sodium in the portion of renal filtrate in distal convoluted tubule
compartment
</dcterms:description>
</rdf:Description>
<rdf:Description rdf:about="protocol1J_chang_fujita_b_1999.sedml#mc_sodium_flux.J_mc_Na">
<semsim:isComputationalComponentFor>
<rdf:Description rdf:about="#property_3">
<semsim:physicalPropertyOf>
<rdf:Description rdf:about="#process_0" dcterms:description="">
<semsim:hasMediatorParticipant>
<rdf:Description rdf:about="#mediator_0">
<semsim:hasPhysicalEntityReference>
<rdf:Description rdf:about="#entity_5">
<ro:part_of>
<rdf:Description rdf:about="#entity_6">
<ro:part_of>
<rdf:Description rdf:about="#entity_4">
<semsim:hasPhysicalDefinition
rdf:resource="http://purl.obolibrary.org/obo/FMA_70981"/>
</rdf:Description>
</ro:part_of>
<semsim:hasPhysicalDefinition
rdf:resource="http://purl.obolibrary.org/obo/FMA_84666"/>
</rdf:Description>
</ro:part_of>
<semsim:hasPhysicalDefinition
rdf:resource="http://purl.obolibrary.org/obo/PR_P55018"/>
</rdf:Description>
</semsim:hasPhysicalEntityReference>
</rdf:Description>
</semsim:hasMediatorParticipant>
<semsim:hasSinkParticipant>
<rdf:Description rdf:about="#sink_0" semsim:hasMultiplier="1.0">
<semsim:hasPhysicalEntityReference>
<rdf:Description rdf:about="#entity_2">
<ro:part_of>
<rdf:Description rdf:about="#entity_3">
<ro:part_of rdf:resource="#entity_4"/>
<semsim:hasPhysicalDefinition
rdf:resource="http://purl.obolibrary.org/obo/FMA_66836"/>
</rdf:Description>
</ro:part_of>
<semsim:hasPhysicalDefinition
rdf:resource="http://purl.obolibrary.org/obo/CHEBI_29101"/>
</rdf:Description>
</semsim:hasPhysicalEntityReference>
</rdf:Description>
</semsim:hasSinkParticipant>
<semsim:hasSourceParticipant>
<rdf:Description rdf:about="#source_0" semsim:hasMultiplier="1.0">
<semsim:hasPhysicalEntityReference rdf:resource="#entity_0"/>
</rdf:Description>
</semsim:hasSourceParticipant>
<semsim:name>Na+ flow across Na-Cl cotransporter</semsim:name>
</rdf:Description>
</semsim:physicalPropertyOf>
<semsim:hasPhysicalDefinition rdf:resource="http://identifiers.org/opb/OPB_00593"/>
</rdf:Description>
</semsim:isComputationalComponentFor>
<dcterms:description>Flux of sodium from portion of renal filtrate in distal convoluted tubule compartment to
portion of cytosol in epithelial cell of distal tubule compartment across Na-Cl cotransporter
</dcterms:description>
</rdf:Description>
<rdf:Description rdf:about="protocol1J_chang_fujita_b_1999.sedml#mc_sodium_flux.C_c_Na">
<semsim:isComputationalComponentFor>
<rdf:Description rdf:about="#property_5">
<semsim:physicalPropertyOf rdf:resource="#entity_2"/>
<semsim:hasPhysicalDefinition rdf:resource="http://identifiers.org/opb/OPB_00340"/>
</rdf:Description>
</semsim:isComputationalComponentFor>
<dcterms:description>Concentration of sodium in the portion of cytosol in epithelial cell of distal tubule
compartment
</dcterms:description>
</rdf:Description>
<rdf:Description rdf:about="protocol1J_chang_fujita_b_1999.sedml#environment.time">
<bqbiol:is rdf:resource="http://identifiers.org/opb/OPB_01023"/>
</rdf:Description>
<rdf:Description rdf:about="protocol1J_chang_fujita_b_1999.sedml#chang_fujita_b_1999_1J">
<ro:modelOf rdf:resource="http://purl.obolibrary.org/obo/CL_0000066"/>
<ro:compartmentOf rdf:resource="http://purl.obolibrary.org/obo/FMA_84666"/>
<ro:compartmentOf rdf:resource="http://purl.obolibrary.org/obo/FMA_84669"/>
<ro:compartmentOf rdf:resource="http://purl.obolibrary.org/obo/FMA_66836"/>
<ro:compartmentOf rdf:resource="http://purl.obolibrary.org/obo/FMA_74550"/>
<ro:compartmentOf rdf:resource="http://purl.obolibrary.org/obo/FMA_9673"/>
<ro:located_in rdf:resource="http://purl.obolibrary.org/obo/FMA_17721"/>
</rdf:Description>
</rdf:RDF>
