Location: Core Domains Principled Model Example @ cce6374c21a6 / Chassis_CoreModelCell.cellml

Author:
Michael Cooling <mcoo001@UoA.auckland.ac.nz>
Date:
2016-04-11 12:26:19+12:00
Desc:
Adding .zip file of complete model
Permanent Source URI:
https://models.cellml.org/workspace/2c5/rawfile/cce6374c21a60771321701b2f88857175ca5c31e/Chassis_CoreModelCell.cellml
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<?xml version="1.0" encoding="utf-8"?>
<model name="Chassis_CoreModelCell" cmeta:id="Chassis_CoreModelCell" 
    xmlns="http://www.cellml.org/cellml/1.1#"
    xmlns:cellml="http://www.cellml.org/cellml/1.1#"
    xmlns:cmeta="http://www.cellml.org/metadata/1.0#"
    xmlns:xlink="http://www.w3.org/1999/xlink"
    >

  <import xlink:href="Principled_Base/Template_Chassis_TwoWellStirredBags.cellml">
    <units name="femtoliter" units_ref="femtoliter" />
    <component name="TwoWellStirredBags" component_ref="TwoWellStirredBags" />
  </import>
  
     <component name="Chassis_CoreModelCell_Parameters">
      <variable name="transcriptionalVolume_initialValue" units="femtoliter" initial_value="1" public_interface="out" />
      <variable name="translationalVolume_initialValue" units="femtoliter" initial_value="50" public_interface="out" />
    </component>

   <component name="Chassis_CoreModelCell">
    <variable name="transcriptionalVolume" units="femtoliter"  public_interface="out" private_interface="in"/>
    <variable name="transcriptionalVolume_initialValue" units="femtoliter" public_interface="in" private_interface="out"/>
    <variable name="translationalVolume" units="femtoliter"  public_interface="out" private_interface="in"/>
    <variable name="translationalVolume_initialValue" units="femtoliter" public_interface="in" private_interface="out"/>
  </component>
 
   <group>
    <relationship_ref relationship="encapsulation" />
    	<component_ref component="Chassis_CoreModelCell">
      		<component_ref component="TwoWellStirredBags" />
    	</component_ref>
   </group> 
  
   <connection>
      <map_components component_1="Chassis_CoreModelCell" component_2="TwoWellStirredBags"/>
      <map_variables variable_1="transcriptionalVolume" variable_2="bag1Volume"/>
      <map_variables variable_1="translationalVolume" variable_2="bag2Volume"/>
      <map_variables variable_1="transcriptionalVolume_initialValue" variable_2="bag1Volume_initialValue"/>
      <map_variables variable_1="translationalVolume_initialValue" variable_2="bag2Volume_initialValue"/>
   </connection>
   
 

</model>