Location: Hodgkin & Huxley (1952) model @ 2499714ec9ee / BG / default_values_BG.cellml

Author:
WeiweiAi <wai484@aucklanduni.ac.nz>
Date:
2022-02-09 17:06:27+13:00
Desc:
Modify the geometry value and gating fitting scripts Add paras
Permanent Source URI:
https://models.cellml.org/workspace/64f/rawfile/2499714ec9ee933bbf88810256b04a0a0d191c21/BG/default_values_BG.cellml

<?xml version='1.0' encoding='UTF-8'?>
<model name="default_values_BG" xmlns="http://www.cellml.org/cellml/1.1#" xmlns:cellml="http://www.cellml.org/cellml/1.1#" xmlns:xlink="http://www.w3.org/1999/xlink">
    <import xlink:href="../cellLib/BG/units_BG.cellml">
        <units name="per_fmol" units_ref="per_fmol"/>
        <units name="fmol" units_ref="fmol"/>
        <units name="fmol_per_sec" units_ref="fmol_per_sec"/>
        <units name="fF" units_ref="fF"/>
        <units name="fS" units_ref="fS"/>
        <units name="fC" units_ref="fC"/>
    </import>
    <component name="model_para">
        <variable initial_value="279.45" name="T" public_interface="out" units="kelvin"/>
        <variable initial_value="0.3e9" name="C_m" public_interface="out" units="fF"/>
        <variable initial_value="0.09e12" name="g_leak" public_interface="out" units="fS"/>
        <variable initial_value="-54.387e-3" name="V_leak" public_interface="out" units="volt"/>
        <!--shift-->
        <variable initial_value="8.46373e-09" name="K_i_Na" public_interface="out" units="per_fmol"/>
        <variable initial_value="4.14332e-07" name="K_e_Na" public_interface="out" units="per_fmol"/>
        <variable initial_value="96.4579" name="K_S00" public_interface="out" units="per_fmol"/>
        <variable initial_value="0.996415" name="K_S10" public_interface="out" units="per_fmol"/>
        <variable initial_value="0.030879" name="K_S20" public_interface="out" units="per_fmol"/>
        <variable initial_value="0.00287084" name="K_S30" public_interface="out" units="per_fmol"/>
        <variable initial_value="358202" name="K_S01" public_interface="out" units="per_fmol"/>
        <variable initial_value="3700.24" name="K_S11" public_interface="out" units="per_fmol"/>
        <variable initial_value="114.671" name="K_S21" public_interface="out" units="per_fmol"/>
        <variable initial_value="10.661" name="K_S31" public_interface="out" units="per_fmol"/>
        <variable initial_value="0.00901049" name="kappa_Na" public_interface="out" units="fmol_per_sec"/>
        <variable initial_value="108.564" name="kappa_m10" public_interface="out" units="fmol_per_sec"/>
        <variable initial_value="7006.35" name="kappa_m20" public_interface="out" units="fmol_per_sec"/>
        <variable initial_value="113042" name="kappa_m30" public_interface="out" units="fmol_per_sec"/>
        <variable initial_value="0.0292345" name="kappa_m11" public_interface="out" units="fmol_per_sec"/>
        <variable initial_value="1.8867" name="kappa_m21" public_interface="out" units="fmol_per_sec"/>
        <variable initial_value="30.4403" name="kappa_m31" public_interface="out" units="fmol_per_sec"/>
        <variable initial_value="0.00175156" name="kappa_h0" public_interface="out" units="fmol_per_sec"/>
        <variable initial_value="0.169559" name="kappa_h1" public_interface="out" units="fmol_per_sec"/>
        <variable initial_value="5.47139" name="kappa_h2" public_interface="out" units="fmol_per_sec"/>
        <variable initial_value="58.8509" name="kappa_h3" public_interface="out" units="fmol_per_sec"/>
        <variable initial_value="0.47744" name="z_m_f" public_interface="out" units="dimensionless"/>
        <variable initial_value="-1.3376" name="z_m_r" public_interface="out" units="dimensionless"/>
        <variable initial_value="-1.84385" name="z_h_f" public_interface="out" units="dimensionless"/>
        <variable initial_value="0.607223" name="z_h_r" public_interface="out" units="dimensionless"/>
        <variable initial_value="1" name="z_Na" public_interface="out" units="dimensionless"/>
        <variable initial_value="8.65233e-09" name="K_i_K" public_interface="out" units="per_fmol"/>
        <variable initial_value="4.23564e-07" name="K_e_K" public_interface="out" units="per_fmol"/>
        <variable initial_value="2221.7" name="K_S0" public_interface="out" units="per_fmol"/>
        <variable initial_value="72.263" name="K_S1" public_interface="out" units="per_fmol"/>
        <variable initial_value="6.2678" name="K_S2" public_interface="out" units="per_fmol"/>
        <variable initial_value="1.2232" name="K_S3" public_interface="out" units="per_fmol"/>
        <variable initial_value="0.63657" name="K_S4" public_interface="out" units="per_fmol"/>
        <variable initial_value="0.00941653" name="kappa_K" public_interface="out" units="fmol_per_sec"/>
        <variable initial_value="0.806101" name="kappa_n1" public_interface="out" units="fmol_per_sec"/>
        <variable initial_value="18.5875" name="kappa_n2" public_interface="out" units="fmol_per_sec"/>
        <variable initial_value="142.867" name="kappa_n3" public_interface="out" units="fmol_per_sec"/>
        <variable initial_value="366.032" name="kappa_n4" public_interface="out" units="fmol_per_sec"/>
        <variable initial_value="0.617785" name="z_n_f" public_interface="out" units="dimensionless"/>
        <variable initial_value="-0.250254" name="z_n_r" public_interface="out" units="dimensionless"/>
        <variable initial_value="1" name="z_K" public_interface="out" units="dimensionless"/>
    </component>
    <component name="initials">
        <variable initial_value="-13039" name="q_m_init" public_interface="out" units="fC"/>
        <variable initial_value="380" name="q_i_Na_init" public_interface="out" units="fmol"/>
        <variable initial_value="725.48" name="q_e_Na_init" public_interface="out" units="fmol"/>
        <variable initial_value="0.00012033" name="q_S00_init" public_interface="out" units="fmol"/>
        <variable initial_value="4.0111e-05" name="q_S10_init" public_interface="out" units="fmol"/>
        <variable initial_value="4.4568e-06" name="q_S20_init" public_interface="out" units="fmol"/>
        <variable initial_value="1.6507e-07" name="q_S30_init" public_interface="out" units="fmol"/>
        <variable initial_value="1.337e-05" name="q_S01_init" public_interface="out" units="fmol"/>
        <variable initial_value="4.4568e-06" name="q_S11_init" public_interface="out" units="fmol"/>
        <variable initial_value="4.952e-07" name="q_S21_init" public_interface="out" units="fmol"/>
        <variable initial_value="1.8341e-08" name="q_S31_init" public_interface="out" units="fmol"/>
        <variable initial_value="5510" name="q_i_K_init" public_interface="out" units="fmol"/>
        <variable initial_value="27.9828" name="q_e_K_init" public_interface="out" units="fmol"/>
        <variable initial_value="4.5648e-06" name="q_S0_init" public_interface="out" units="fmol"/>
        <variable initial_value="1.1412e-06" name="q_S1_init" public_interface="out" units="fmol"/>
        <variable initial_value="2.2824e-06" name="q_S2_init" public_interface="out" units="fmol"/>
        <variable initial_value="5.706e-07" name="q_S3_init" public_interface="out" units="fmol"/>
        <variable initial_value="2.853e-07" name="q_S4_init" public_interface="out" units="fmol"/>
    </component>
</model>