- Author:
- Zohreh Ekhlasi <zekh167@aucklanduni.ac.nz>
- Date:
- 2021-05-24 16:04:55+12:00
- Desc:
- files for human bladder scaffold workflow added.
- Permanent Source URI:
- https://models.cellml.org/workspace/676/rawfile/3d3a8b1d52c8df94071da1f86f508d6ef1084981/Mesh-settings.json
{
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"displayAxes": false,
"displayElementAxes": false,
"displayElementNumbers": false,
"displayLines": true,
"displayLinesExterior": false,
"displayMarkerPoints": false,
"displayModelRadius": false,
"displayNodeDerivativeLabels": [
"D1",
"D2",
"D3"
],
"displayNodeDerivatives": 0,
"displayNodeNumbers": false,
"displayNodePoints": false,
"displaySurfaces": true,
"displaySurfacesExterior": true,
"displaySurfacesTranslucent": true,
"displaySurfacesWireframe": false,
"scaffoldPackage": {
"_ScaffoldPackage": true,
"rotation": [
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],
"scaffoldSettings": {
"Central path LUT": {
"_ScaffoldPackage": true,
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"D3 derivatives": false,
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},
"scaffoldTypeName": "1D Path 1",
"scale": [
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"translation": [
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"userAnnotationGroups": [
{
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"dimension": 1,
"identifierRanges": "1-4",
"name": "urinary bladder",
"ontId": "UBERON:0001255"
},
{
"_AnnotationGroup": true,
"dimension": 1,
"identifierRanges": "5-8",
"name": "urethra",
"ontId": "UBERON:0000057"
}
]
},
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"Include urethra": true,
"Major diameter": 75.0,
"Minor diameter": 35.0,
"Neck angle degrees": 115,
"Neck diameter 1": 5.0,
"Neck diameter 2": 4.0,
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"Number of elements along urethra": 8,
"Number of elements around": 12,
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"Number of elements ureter radial": 2,
"Refine": false,
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"Ureter": {
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"rotation": [
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"scaffoldSettings": {
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"Number of vessels": 1,
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"Ostium inter-vessel distance": 0.8,
"Ostium inter-vessel height": 0.0,
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"Ostium wall thickness": 0.5,
"Outlet": false,
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"Unit scale": 1.0,
"Use cross derivatives": false,
"Use linear through ostium wall": true,
"Use linear through vessel wall": true,
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"Vessel angle 1 spread degrees": 0.0,
"Vessel angle 2 degrees": 0.0,
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},
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},
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"Ureter position down": 0.63,
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"Urethra diameter 2": 1.0,
"Urethra wall thickness": 0.5,
"Use cross derivatives": false,
"Use linear through wall": true,
"Wall thickness": 0.5
},
"scaffoldTypeName": "3D Bladder with Urethra 1",
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}
},
"segmentation_data_settings": {
"displayDataContours": false,
"displayDataMarkerNames": false,
"displayDataMarkerPoints": false,
"displayDataPoints": false,
"displayDataRadius": false
}
}
