- Author:
- leyla <noroozbabaee@gmail.com>
- Date:
- 2021-06-28 20:13:23+12:00
- Desc:
- Conversion of the Epithelial Modules From Python to CellML
- Permanent Source URI:
- https://models.cellml.org/workspace/6b4/rawfile/74195ac8689f1c97c4ebffbce80647281475f5a6/NHE3_Weinstein/experiment/experiment_NHE3.cellml
<?xml version='1.0'?>
<model name="experiment_NHE3" xmlns="http://www.cellml.org/cellml/1.1#" xmlns:cellml="http://www.cellml.org/cellml/1.1#" xmlns:xlink="http://www.w3.org/1999/xlink">
<!-- ============================================= Import the required units from the Units file ==================================================== -->
<import xlink:href="../general/Units_for_EpithelialCell.cellml">
<units name="millivolt" units_ref="millivolt"/>
<units name="per_second" units_ref="per_second"/>
<units name="coulomb_per_mole" units_ref="coulomb_per_mole"/>
<units name="joule_per_millimole" units_ref="joule_per_millimole"/>
<units name="molar" units_ref="molar"/>
<units name="millimole" units_ref="millimole"/>
<units name="millimole2_per_joulesecond" units_ref="millimole2_per_joulesecond"/>
<units name="millimole_per_second" units_ref="millimole_per_second"/>
</import>
<!--========================================= Import Required Componont =========================================-->
<import xlink:href="../components/NHE3.cellml">
<component component_ref="Weinstein_NHE3" name="Weinstein_NHE3"/>
</import>
<!--===================================== Import all Parameters from the Parameter file ============================================== -->
<import xlink:href="../components/Weinstein_NHE3_92.cellml">
<component component_ref="input_values" name="input_values"/>
</import>
<!--========================================= Connect Component to Parameters =========================================-->
<connection>
<map_components component_1="input_values" component_2="Weinstein_NHE3"/>
<map_variables variable_1="NH4_M" variable_2="NH4_M"/>
<map_variables variable_1="Na_M" variable_2="Na_M"/>
<map_variables variable_1="H_M" variable_2="H_M"/>
<map_variables variable_1="Ami" variable_2="Ami"/>
<map_variables variable_1="p_nah_na" variable_2="p_nah_na"/>
<map_variables variable_1="p_nah_h" variable_2="p_nah_h"/>
<map_variables variable_1="p_nah_nh4" variable_2="p_nah_nh4"/>
<map_variables variable_1="k_nah_na" variable_2="k_nah_na"/>
<map_variables variable_1="k_nah_h" variable_2="k_nah_h"/>
<map_variables variable_1="k_nah_nh4" variable_2="k_nah_nh4"/>
<map_variables variable_1="f_M" variable_2="f_M"/>
<map_variables variable_1="f_m" variable_2="f_m"/>
<map_variables variable_1="k_mod" variable_2="k_mod"/>
<map_variables variable_1="NNHE3" variable_2="NNHE3"/>
</connection>
<!-- ======================================== experiment_NHE3_Output ============================================= -->
<component name="output">
<variable name="time" public_interface="out" units="second"/>
<variable name="Na_I" public_interface="in" units="molar"/>
<variable name="H_I" public_interface="in" units="molar"/>
<variable name="NH4_I" public_interface="in" units="molar"/>
<variable name="Na_NHE3_Flux" public_interface="in" units="millimole_per_second"/>
<variable name="H_NHE3_Flux" public_interface="in" units="millimole_per_second"/>
<variable name="NH4_NHE3_Flux" public_interface="in" units="millimole_per_second"/>
<variable name="m" public_interface="in" units="second"/>
</component>
<connection>
<map_components component_1="output" component_2="Weinstein_NHE3"/>
<map_variables variable_1="time" variable_2="time"/>
<map_variables variable_1="Na_I" variable_2="Na_I"/>
<map_variables variable_1="H_I" variable_2="H_I"/>
<map_variables variable_1="NH4_I" variable_2="NH4_I"/>
<map_variables variable_1="Na_NHE3_Flux" variable_2="Na_NHE3_Flux"/>
<map_variables variable_1="H_NHE3_Flux" variable_2="H_NHE3_Flux"/>
<map_variables variable_1="NH4_NHE3_Flux" variable_2="NH4_NHE3_Flux"/>
<map_variables variable_1="m" variable_2="m"/>
</connection>
</model>
