- Author:
- WeiweiAi <wai484@aucklanduni.ac.nz>
- Date:
- 2022-04-13 16:28:32+12:00
- Desc:
- Add Matlab scripts to build cellML models
- Permanent Source URI:
- https://models.cellml.org/workspace/6bc/rawfile/e653d60e211e14e8a4b552af1bc280317474fe43/Scripts/plotExp.py
# Plot experiment results
import matplotlib.pyplot as plt
def plotExp(figs,subfigs,figfiles):
# Set figure dimension (width, height) in inches.
fig, axs = plt.subplots(figs['rows'],figs['cols'],figsize=(figs['width'],figs['height']))
plt.subplots_adjust(left=figs['left'], bottom=figs['bottom'], right=figs['right'], top=figs['top'], wspace=figs['wspace'], hspace=figs['hspace'])
# Set the subfigures
for subfig in subfigs.values():
rid=subfig['rowid']
cid=subfig['colid']
traces=subfig['traces']
if figs['rows']==1 and figs['cols']==1:
ax=axs
elif figs['rows']==1 or figs['cols']==1:
ax=axs [rid]
else:
ax=axs [rid,cid]
ax.set_xlabel (subfig['xlabel'], fontsize= subfig['labelfont'])
ax.set_ylabel (subfig['ylabel'], fontsize= subfig['labelfont'])
ax.grid(visible=subfig['grid'], axis=subfig['gridaxis'])
if subfig['twiny']==True:
tax = ax.twinx()
tax.tick_params(axis='y', labelcolor=trace['linecolor'])
tax.set_ylabel (subfig['ylabel2'], fontsize= subfig['labelfont'],color=subfig['labelcolor'])
# draw the traces
for trace in traces.values():
if trace['y2']==True:
tax.plot(trace['dataX'], trace['dataY'], ls=trace['linestyle'], marker=trace['marker'], color=trace['linecolor'], label = trace['lname'])
else:
ax.plot(trace['dataX'], trace['dataY'], ls=trace['linestyle'], marker=trace['marker'], color=trace['linecolor'], label = trace['lname'])
else:
# draw the traces
for trace in traces.values():
ax.plot(trace['dataX'], trace['dataY'], ls=trace['linestyle'], marker=trace['marker'], color=trace['linecolor'], label = trace['lname'])
if subfig['lgdshow']==True:
if subfig['twiny']==True:
lines, labels = ax.get_legend_handles_labels()
lines2, labels2 = tax.get_legend_handles_labels()
ax.legend(lines + lines2, labels + labels2, loc = subfig['lgdloc'], fontsize=subfig['lgdfont'], frameon=False,ncol=subfig['lgdncol'])
else:
ax.legend(loc = subfig['lgdloc'], fontsize=subfig['lgdfont'], frameon=False,ncol=subfig['lgdncol'])
if subfig['setlim']==True:
ax.set(xlim=(subfig['xmin'], subfig['xmax']), ylim=(subfig['ymin'], subfig['ymax']))
plt.savefig(figfiles)
plt.show()
return fig,axs
