Location: Reproducibility of the computational model of induced pluripotent stem-cell derived cardiomyocytes @ a619946dc2f8 / Current_Ito.cellml

Author:
nima <nafs080@aucklanduni.ac.nz>
Date:
2022-02-03 16:44:53+13:00
Desc:
Folders deleted in the workspace
Permanent Source URI:
https://models.cellml.org/workspace/702/rawfile/a619946dc2f89d6d787cebfbd9b1f2a54f5aa227/Current_Ito.cellml

<?xml version='1.0' encoding='UTF-8'?>
<model name="Current_eq" xmlns="http://www.cellml.org/cellml/1.1#" xmlns:cellml="http://www.cellml.org/cellml/1.1#" xmlns:xlink="http://www.w3.org/1999/xlink">
    <import xlink:href="unit.cellml">
        <units name="ms" units_ref="ms"/>
        <units name="per_ms" units_ref="per_ms"/>
        <units name="mV" units_ref="mV"/>
        <units name="mM" units_ref="mM"/>
        <units name="mM3" units_ref="mM3"/>
        <units name="J_per_mol_per_kelvin" units_ref="J_per_mol_per_kelvin"/>
        <units name="C_per_mol" units_ref="C_per_mol"/>
        <units name="nS_per_pF" units_ref="nS_per_pF"/>
        <units name="pA_per_pF" units_ref="pA_per_pF"/>
        <units name="mV_ms" units_ref="mV_ms"/>
        <units name="mM_per_ms" units_ref="mM_per_ms"/>
        <units name="per_mM_per_ms" units_ref="per_mM_per_ms"/>
        <units name="per_mM2_per_ms" units_ref="per_mM2_per_ms"/>
    </import>
    <import xlink:href="parameter.cellml">
        <component component_ref="parameter" name="parameter"/>
    </import>
    <import xlink:href="parameter_Ito.cellml">
        <component component_ref="parameter_Ito" name="parameter_Ito"/>
    </import>
    <import xlink:href="gating_Ito.cellml">
        <component component_ref="gating_Ito" name="gating_Ito"/>
    </import>
    <component name="Current_Ito">
        <variable name="v" private_interface="in" public_interface="out" units="mV"/>
        <variable initial_value="8.314472" name="R" public_interface="out" units="J_per_mol_per_kelvin"/>
        <variable initial_value="310.0" name="T" public_interface="out" units="kelvin"/>
        <variable initial_value="96.4853415" name="F" public_interface="out" units="C_per_mol"/>
        <variable name="E_K" public_interface="out" units="mV"/>
        <variable name="Ko" private_interface="in" public_interface="out" units="mM"/>
        <variable initial_value="150" name="Ki" public_interface="out" units="mM"/>
        <variable name="r_1" private_interface="in" public_interface="out" units="dimensionless"/>
        <variable name="r_2" private_interface="in" public_interface="out" units="dimensionless"/>
        <variable name="r_5" private_interface="in" public_interface="out" units="dimensionless"/>
        <variable name="r_6" private_interface="in" public_interface="out" units="dimensionless"/>
        <variable name="s_1" private_interface="in" public_interface="out" units="dimensionless"/>
        <variable name="s_2" private_interface="in" public_interface="out" units="dimensionless"/>
        <variable name="s_5" private_interface="in" public_interface="out" units="dimensionless"/>
        <variable name="s_6" private_interface="in" public_interface="out" units="dimensionless"/>
        <variable name="tau_r_const" public_interface="in" units="dimensionless"/>
        <variable name="tau_s_const" public_interface="in" units="dimensionless"/>
        <variable name="x_to_inf_act" public_interface="in" units="dimensionless"/>
        <variable name="x_to_inf_inact" public_interface="in" units="dimensionless"/>
        <variable initial_value="0" name="X_to_act" public_interface="out" units="dimensionless"/>
        <variable initial_value="0" name="X_to_inact" public_interface="out" units="dimensionless"/>
        <variable name="g_to" public_interface="out" units="nS_per_pF"/>
        <variable name="i_to" public_interface="out" units="pA_per_pF"/>
        <variable name="r_0" public_interface="in" units="nS_per_pF"/>
        <variable name="tau_to_act" public_interface="in" units="ms"/>
        <variable name="tau_to_inact" public_interface="in" units="ms"/>
        <variable initial_value="1" name="t" public_interface="out" units="ms"/>
        <math xmlns="http://www.w3.org/1998/Math/MathML">
            <apply>
                <eq/>
                <ci>E_K</ci>
                <apply>
                    <times/>
                    <apply>
                        <divide/>
                        <apply>
                            <times/>
                            <ci>R</ci>
                            <ci>T</ci>
                        </apply>
                        <ci>F</ci>
                    </apply>
                    <apply>
                        <ln/>
                        <apply>
                            <divide/>
                            <ci>Ko</ci>
                            <ci>Ki</ci>
                        </apply>
                    </apply>
                </apply>
            </apply>
            <apply>
                <eq/>
                <apply>
                    <diff/>
                    <bvar>
                        <ci>t</ci>
                    </bvar>
                    <ci>X_to_act</ci>
                </apply>
                <apply>
                    <divide/>
                    <apply>
                        <minus/>
                        <ci>x_to_inf_act</ci>
                        <ci>X_to_act</ci>
                    </apply>
                    <ci>tau_to_act</ci>
                </apply>
            </apply>
            <apply>
                <eq/>
                <apply>
                    <diff/>
                    <bvar>
                        <ci>t</ci>
                    </bvar>
                    <ci>X_to_inact</ci>
                </apply>
                <apply>
                    <divide/>
                    <apply>
                        <minus/>
                        <ci>x_to_inf_inact</ci>
                        <ci>X_to_inact</ci>
                    </apply>
                    <ci>tau_to_inact</ci>
                </apply>
            </apply>
            <apply>
                <eq/>
                <apply>
                    <diff/>
                    <bvar>
                        <ci>t</ci>
                    </bvar>
                    <ci>v</ci>
                </apply>
                <cn cellml:units="dimensionless">0</cn>
            </apply>
            <apply>
                <eq/>
                <ci>g_to</ci>
                <ci>r_0</ci>
            </apply>
            <apply>
                <eq/>
                <ci>i_to</ci>
                <apply>
                    <times/>
                    <ci>g_to</ci>
                    <ci>X_to_act</ci>
                    <ci>X_to_inact</ci>
                    <apply>
                        <minus/>
                        <ci>v</ci>
                        <ci>E_K</ci>
                    </apply>
                </apply>
            </apply>
        </math>
    </component>
    <connection>
        <map_components component_1="Current_Ito" component_2="gating_Ito"/>
        <map_variables variable_1="x_to_inf_act" variable_2="x_to_inf_act"/>
        <map_variables variable_1="x_to_inf_inact" variable_2="x_to_inf_inact"/>
        <map_variables variable_1="tau_to_act" variable_2="tau_to_act"/>
        <map_variables variable_1="tau_to_inact" variable_2="tau_to_inact"/>
    </connection>
    <connection>
        <map_components component_1="Current_Ito" component_2="parameter_Ito"/>
        <map_variables variable_1="r_0" variable_2="r_0"/>
        <map_variables variable_1="r_1" variable_2="r_1"/>
        <map_variables variable_1="r_2" variable_2="r_2"/>
        <map_variables variable_1="r_5" variable_2="r_5"/>
        <map_variables variable_1="r_6" variable_2="r_6"/>
        <map_variables variable_1="s_1" variable_2="s_1"/>
        <map_variables variable_1="s_2" variable_2="s_2"/>
        <map_variables variable_1="s_5" variable_2="s_5"/>
        <map_variables variable_1="s_6" variable_2="s_6"/>
        <map_variables variable_1="tau_r_const" variable_2="tau_r_const"/>
        <map_variables variable_1="tau_s_const" variable_2="tau_s_const"/>
    </connection>
    <connection>
        <map_components component_1="Current_Ito" component_2="parameter"/>
        <map_variables variable_1="v" variable_2="v"/>
        <map_variables variable_1="Ko" variable_2="Ko"/>
    </connection>
    <connection>
        <map_components component_1="gating_Ito" component_2="parameter"/>
        <map_variables variable_1="v" variable_2="v"/>
    </connection>
    <connection>
        <map_components component_1="parameter_Ito" component_2="gating_Ito"/>
        <map_variables variable_1="r_1" variable_2="r_1"/>
        <map_variables variable_1="r_2" variable_2="r_2"/>
        <map_variables variable_1="r_5" variable_2="r_5"/>
        <map_variables variable_1="r_6" variable_2="r_6"/>
        <map_variables variable_1="s_1" variable_2="s_1"/>
        <map_variables variable_1="s_2" variable_2="s_2"/>
        <map_variables variable_1="s_5" variable_2="s_5"/>
        <map_variables variable_1="s_6" variable_2="s_6"/>
        <map_variables variable_1="tau_r_const" variable_2="tau_r_const"/>
        <map_variables variable_1="tau_s_const" variable_2="tau_s_const"/>
    </connection>
</model>