Location: Modeling the Recruitment and Synchronization of SMCs (Koenigsberger et al. 2004) @ eb9b6ae06871 / Components / buildsrc / JCli.txt

Author:

WeiweiAi <wai484@aucklanduni.ac.nz>

Date:

2022-06-15 11:08:09+12:00

Desc:

Include simFig3

Permanent Source URI:

https://models.cellml.org/workspace/874/rawfile/eb9b6ae068716f451953bd5900bcfdaa5761b0cf/Components/buildsrc/JCli.txt

def model JCli as
    def import using "../cellLib/Components/units.cellml" for
        unit C_per_mmol using unit C_per_mmol;
        unit J_per_K_mol using unit J_per_K_mol;
        unit mM using unit mM;
        unit mV using unit mV;
        unit uM_per_s using unit uM_per_s;
        unit uM_per_s_mV using unit uM_per_s_mV;
    enddef;

    def import using "../cellLib/Components/E_Nernst.cellml" for
        comp E_Cl using comp E_Cl;
    enddef;

    def comp JCli as
        var R: J_per_K_mol {pub: in, priv: out};
        var F: C_per_mmol {pub: in, priv: out};
        var T: kelvin {pub: in, priv: out};
        var G_Cl: uM_per_s_mV {pub: in};
        var v_Cl: mV {pub: out, priv: in};
        var Clo: mM {pub: in, priv: out};
        var Cli: mM {pub: in, priv: out};
        var v_i: mV {pub: in};
        var J_Cli: uM_per_s {pub: out};

        J_Cli=G_Cl*(v_i-v_Cl);

    enddef;

    def group as encapsulation for
        comp JCli incl
            comp E_Cl;
        endcomp;
    enddef;

    def map between E_Cl and JCli for
        vars E_Cl and v_Cl;
        vars R and R;
        vars F and F;
        vars T and T;
        vars Cli and Cli;
        vars Clo and Clo;
    enddef;

enddef;