Location: Carbon Dioxide pH/Gas Transport and Exchange @ afeeca156d18 / pH_co2.cellml

Author:
aram148 <42922407+aram148@users.noreply.github.com>
Date:
2022-07-19 16:08:46+12:00
Desc:
Added CO2 exchange and pH bg models
Permanent Source URI:
https://models.cellml.org/workspace/8c0/rawfile/afeeca156d18d9435303b544ea071f7cf868595d/pH_co2.cellml

<?xml version='1.0' encoding='UTF-8'?>
<model name="pH_co2" xmlns="http://www.cellml.org/cellml/1.1#" xmlns:cellml="http://www.cellml.org/cellml/1.1#">
    <units name="dim">
        <unit units="dimensionless"/>
    </units>
    <units name="kPa">
        <unit units="joule"/>
        <unit exponent="-1" units="litre"/>
    </units>
    <units name="mmol_l">
        <unit prefix="milli" units="mole"/>
        <unit exponent="-1" units="litre"/>
    </units>
    <units name="L_per_s">
        <unit units="litre"/>
        <unit exponent="-1" units="second"/>
    </units>
    <component name="main">
        <variable initial_value="6.1" name="pKHCO3_e" units="dim"/>
        <variable initial_value="6.1" name="pKHCO3_p" units="dim"/>
        <variable name="CO2_e" units="mmol_l"/>
        <variable initial_value="1.2" name="CO2_p" units="mmol_l"/>
        <variable initial_value="7.4" name="pHp" units="dim"/>
        <variable name="pHe" units="dim"/>
        <variable name="HCO3_e" units="mmol_l"/>
        <variable name="HCO3_p" units="mmol_l"/>
        <variable name="CO2_T" units="mmol_l"/>
        <variable initial_value="9.3" name="Hb_p" units="mmol_l"/>
        <variable initial_value="21" name="Hb_e" units="mmol_l"/>
        <variable name="f_e" units="dim"/>
        <variable name="f_p" units="dim"/>
        <variable initial_value="0.225" name="alpha_p" units="dim"/>
        <variable initial_value="0.191" name="alpha_e" units="dim"/>
        <variable initial_value="0" name="V_Ex_air" units="L_per_s"/>
        <variable initial_value="1" name="V_Ex_air_max" units="L_per_s"/>
        <variable initial_value="0" name="t" units="dim"/>
        <math xmlns="http://www.w3.org/1998/Math/MathML">
            <apply>
                <eq/>
                <ci>CO2_e</ci>
                <apply>
                    <times/>
                    <apply>
                        <divide/>
                        <ci>alpha_e</ci>
                        <ci>alpha_p</ci>
                    </apply>
                    <ci>CO2_p</ci>
                </apply>
            </apply>
            <apply>
                <eq/>
                <ci>pHe</ci>
                <apply>
                    <plus/>
                    <ci>pHp</ci>
                    <apply>
                        <log/>
                        <apply>
                            <minus/>
                            <cn cellml:units="dim">3.094</cn>
                            <apply>
                                <times/>
                                <cn cellml:units="dim">0.335</cn>
                                <ci>pHp</ci>
                            </apply>
                        </apply>
                    </apply>
                </apply>
            </apply>
            <apply>
                <eq/>
                <ci>HCO3_p</ci>
                <apply>
                    <times/>
                    <apply>
                        <power/>
                        <cn cellml:units="dim">10</cn>
                        <apply>
                            <minus/>
                            <ci>pHp</ci>
                            <ci>pKHCO3_p</ci>
                        </apply>
                    </apply>
                    <ci>CO2_p</ci>
                </apply>
            </apply>
            <apply>
                <eq/>
                <ci>HCO3_e</ci>
                <apply>
                    <times/>
                    <apply>
                        <power/>
                        <cn cellml:units="dim">10</cn>
                        <apply>
                            <minus/>
                            <ci>pHe</ci>
                            <ci>pKHCO3_e</ci>
                        </apply>
                    </apply>
                    <ci>CO2_e</ci>
                </apply>
            </apply>
            <apply>
                <eq/>
                <ci>f_p</ci>
                <apply>
                    <divide/>
                    <ci>Hb_p</ci>
                    <ci>Hb_e</ci>
                </apply>
            </apply>
            <apply>
                <eq/>
                <ci>f_e</ci>
                <apply>
                    <minus/>
                    <cn cellml:units="dim">1</cn>
                    <ci>f_p</ci>
                </apply>
            </apply>
            <apply>
                <eq/>
                <ci>CO2_T</ci>
                <apply>
                    <plus/>
                    <apply>
                        <times/>
                        <apply>
                            <plus/>
                            <ci>CO2_p</ci>
                            <ci>HCO3_p</ci>
                        </apply>
                        <ci>f_p</ci>
                    </apply>
                    <apply>
                        <times/>
                        <apply>
                            <plus/>
                            <ci>CO2_e</ci>
                            <ci>HCO3_e</ci>
                        </apply>
                        <ci>f_e</ci>
                    </apply>
                </apply>
            </apply>
            <apply>
                <eq/>
                <apply>
                    <diff/>
                    <bvar>
                        <ci>t</ci>
                    </bvar>
                    <ci>V_Ex_air</ci>
                </apply>
                <apply>
                    <times/>
                    <apply>
                        <minus/>
                        <cn cellml:units="dim">1.0</cn>
                    </apply>
                    <ci>V_Ex_air_max</ci>
                </apply>
            </apply>
        </math>
    </component>
</model>