Location: Deforming Heart @ a78ada1238a4 / FieldML / heart.xml

Author:

Tommy Yu <tommy.yu@auckland.ac.nz>

Date:

2012-05-15 13:36:07+12:00

Desc:

Updated json for pmr2.fieldml-0.5

Permanent Source URI:

https://models.cellml.org/workspace/deformingheart/rawfile/a78ada1238a43d137db37c568049bf76df0899ff/FieldML/heart.xml

<?xml version="1.0" encoding="UTF-8"?>
<Fieldml version="0.5"
  xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
  xmlns:xlink="http://www.w3.org/1999/xlink"
  xsi:noNamespaceSchemaLocation="http://www.fieldml.org/resources/xml/0.5/FieldML_0.5.xsd">
 <Region name="heart">

  <Import xlink:href="http://www.fieldml.org/resources/xml/0.5/FieldML_Library_0.5.xml" region="library">
    <ImportType localName="real.1d" remoteName="real.1d"/>
    <ImportType localName="parameters.3d.unit.trilinearLagrange" remoteName="parameters.3d.unit.trilinearLagrange"/>
    <ImportType localName="coordinates.rc.3d" remoteName="coordinates.rc.3d"/>
    <ImportType localName="coordinates.rc.3d.component" remoteName="coordinates.rc.3d.component"/>
    <ImportType localName="boolean" remoteName="boolean"/>
    <ImportEvaluator localName="parameters.3d.unit.trilinearLagrange.argument" remoteName="parameters.3d.unit.trilinearLagrange.argument"/>
    <ImportEvaluator localName="interpolator.3d.unit.trilinearLagrange" remoteName="interpolator.3d.unit.trilinearLagrange"/>
    <ImportEvaluator localName="chart.3d.argument" remoteName="chart.3d.argument"/>
    <ImportEvaluator localName="localNodes.3d.cube2x2x2.argument" remoteName="localNodes.3d.cube2x2x2.argument"/>
	 <ImportEvaluator localName="shape.unit.cube" remoteName="shape.unit.cube"/> 
  </Import>

  <EnsembleType name="heart.nodes.type">
   <Members>
    <MemberRange min="1" max="5045" />
   </Members>
  </EnsembleType>

  <ArgumentEvaluator name="heart.nodes.argument" valueType="heart.nodes.type" />

  <DataResource name="heart.connectivity.resource">
    <DataResourceDescription>
      <DataResourceHref xlink:href="heart_mesh.connectivity" format="PLAIN_TEXT"/>
    </DataResourceDescription>
    <ArrayDataSource name="mesh.connectivity" location="1" rank="2">
      <RawArraySize>
      	3840 8
      </RawArraySize>
    </ArrayDataSource>
  </DataResource>

  <MeshType name="heart.mesh.type">
   <Elements name="element">
     <Members>
		 <MemberRange min="1" max="3840" />
     </Members>
   </Elements>
   <Chart name="xi">
     <Components name="heart.mesh.type.xi.component" count="3"/>
   </Chart>
   <Shapes evaluator="shape.unit.cube" />
  </MeshType>

  <ArgumentEvaluator name="heart.mesh.argument" valueType="heart.mesh.type" />

  <ArgumentEvaluator name="heart.nodal_dofs" valueType="real.1d">
   <Arguments>
     <Argument name="heart.nodes.argument" />
   </Arguments>
  </ArgumentEvaluator>

  <ParameterEvaluator name="heart.cube2x2x2_nodes" valueType="heart.nodes.type">
   <DenseArrayData data="mesh.connectivity">
    <DenseIndexes>
	  <IndexEvaluator evaluator="heart.mesh.argument.element" />
     <IndexEvaluator evaluator="localNodes.3d.cube2x2x2.argument" />
    </DenseIndexes>
   </DenseArrayData>
  </ParameterEvaluator>
  
  <AggregateEvaluator name="heart.element_params.trilinearLagrange" valueType="parameters.3d.unit.trilinearLagrange">
   <Bindings>
     <BindIndex argument="localNodes.3d.cube2x2x2.argument" indexNumber="1"/>
     <Bind argument="heart.nodes.argument" source="heart.cube2x2x2_nodes"/>
   </Bindings>
   <ComponentEvaluators default="heart.nodal_dofs" />
  </AggregateEvaluator>

  <ReferenceEvaluator name="heart.trilinearLagrange" evaluator="interpolator.3d.unit.trilinearLagrange"
      valueType="real.1d">
   <Bindings>
	 <Bind argument="chart.3d.argument" source="heart.mesh.argument.xi" />
    <Bind argument="parameters.3d.unit.trilinearLagrange.argument" source="heart.element_params.trilinearLagrange" />
   </Bindings>
  </ReferenceEvaluator>

  <PiecewiseEvaluator name="heart.template.trilinearLagrange" valueType="real.1d">
   <IndexEvaluators>
     <IndexEvaluator evaluator="heart.mesh.argument.element" indexNumber="1" />
   </IndexEvaluators>
   <EvaluatorMap default="heart.trilinearLagrange" />
  </PiecewiseEvaluator>

  <ArgumentEvaluator name="heart.rc3.component" valueType="coordinates.rc.3d.component" />

  <DataResource name="heart.node.coordinates.resource">
    <DataResourceDescription>
      <DataResourceHref xlink:href="heart_mesh.time.node.coordinates" format="PLAIN_TEXT"/>
    </DataResourceDescription>
    <ArrayDataSource name="node.coordinates" location="1" rank="2">
      <RawArraySize>
      	5045 3
      </RawArraySize>
    </ArrayDataSource>
  </DataResource>

  <ParameterEvaluator name="heart.node.coordinates" valueType="real.1d">
   <DenseArrayData data="node.coordinates">
    <DenseIndexes>
     <IndexEvaluator evaluator="heart.nodes.argument" />
     <IndexEvaluator evaluator="heart.rc3.component" />
    </DenseIndexes>
   </DenseArrayData>
  </ParameterEvaluator>

  <AggregateEvaluator name="heart.coordinates" valueType="coordinates.rc.3d">
   <Bindings>
     <BindIndex argument="heart.rc3.component" indexNumber="1"/>
     <Bind argument="heart.nodal_dofs" source="heart.node.coordinates"/>
   </Bindings>
   <ComponentEvaluators>
    <ComponentEvaluator component="1" evaluator="heart.template.trilinearLagrange" />
    <ComponentEvaluator component="2" evaluator="heart.template.trilinearLagrange" />
    <ComponentEvaluator component="3" evaluator="heart.template.trilinearLagrange" />
   </ComponentEvaluators>
  </AggregateEvaluator>

  </Region>
</Fieldml>