Location: Gasser, Ogden, Holzapfel, 2006 @ 0caf9f3b2221 / gasser_ogden_holzapfel_2006_b.cellml

Author:
Catherine Lloyd <c.lloyd@auckland.ac.nz>
Date:
2010-05-10 21:31:58+12:00
Desc:
Updated documentation.
Permanent Source URI:
https://models.cellml.org/workspace/gasser_ogden_holzapfel_2006/rawfile/0caf9f3b2221fcae1bcc94efb76e7fbece3369f5/gasser_ogden_holzapfel_2006_b.cellml

<?xml version='1.0' encoding='utf-8'?>
<!--  FILE :  FiberDispersion_law_1248.xml

CREATED :  1st January 2007

LAST MODIFIED : 1st February 2007

AUTHOR :  Holger Schmid
          Bioengineering Institute
          The University of Auckland
          
MODEL STATUS :  This model conforms to the CellML 1.0 Specification released on
10th August 2001, and the 16/1/02 CellML Metadata 1.0 Specification.

The model represented here focuses on the combination 1,2,4,8 of the fibre dispersion law. 
With '1' and '2' representing the isotropic components of the functional form and 
'4'  and '8' representing the anisotropic components of the functional form.

DESCRIPTION :  This file contains a CellML description of the Guccione constitutive material law, defining the relation between the six independent strain components and the stress components.

CHANGES:
18/02/04 - CML - Completed the Metadata.  
  
--><model xmlns="http://www.cellml.org/cellml/1.0#" xmlns:cmeta="http://www.cellml.org/metadata/1.0#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqs="http://www.cellml.org/bqs/1.0#" xmlns:cellml="http://www.cellml.org/cellml/1.0#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" cmeta:id="FiberDisperion" name="ogden_gasser_holzapfel_2005_version02">
    
<documentation xmlns="http://cellml.org/tmp-documentation">
<article>
  <articleinfo>
  <title>Fibre Dispersion Law</title>
  <author> 
    <firstname>Holger</firstname>
          <surname>Schmid</surname>

    <affiliation>
      <shortaffil>Bioengineering Institute, University of Auckland</shortaffil>
    </affiliation>
  </author>
</articleinfo>
  <section id="sec_status">
   This CellML model was implemented in a manner that could be used for peforming finite element model simulations on the CMISS software program developed at the Bioengineering Institute, University of Auckland. The model file presented here focuses on the functional form of the fibre dispersion law corresponding to the the combination 1,2,4,8 <emphasis>(FiberDispersion_law_1248)</emphasis>, with 1 and 2 representing the isotropic components of the functional form, and 4 and 8 representing the anisotropic components of the fucntional form. For additional information on implementation of cellML files in CMISS, please refer to the following <ulink url="http://www.bioeng.auckland.ac.nz/people/nickerso/cmiss/help.html">Link</ulink>.   
  </section>
  <sect1 id="sec_structure">
<title>Model Structure</title>    
<para>
Constitutive relations are fundamental to the solution of problems in continuum mechanics, and are required in the study of, for example, mechanically dominated clinical interventions involving soft biological tissues. Structural continuum constitutive models of arterial layers integrate information about the tissue morphology and therefore allow investigation of the interrelation between structure and function in response to mechanical loading. Collagen fibres are key ingredients in the structure of arteries. In the media (the middle layer of the artery wall) they are arranged in two helically distributed families with a small pitch and very little dispersion in their orientation (i.e. they are aligned quite close to the circumferential direction). By contrast, in the adventitial and intimal layers, the orientation of the collagen fibres is dispersed, as shown by polarized light microscopy of stained arterial tissue. As a result, continuum models that do not account for the dispersion are not able to capture accurately the stress-strain response of these layers. The purpose of this paper, therefore, is to develop a structural continuum framework that is able to represent the dispersion of the collagen fibre orientation. This then allows the development of a new hyperelastic free-energy function that is particularly suited for representing the anisotropic elastic properties of adventitial and intimal layers of arterial walls, and is a generalization of the fibre-reinforced structural model introduced by Holzapfel and Gasser (Holzapfel and Gasser 2001 Comput. Meth. Appl. Mech. Eng. 190, 4379-4403) and Holzapfel et al. (Holzapfel et al. 2000 J. Elast. 61, 1-48). The model incorporates an additional scalar structure parameter that characterizes the dispersed collagen orientation. An efficient finite element implementation of the model is then presented and numerical examples show that the dispersion of the orientation of collagen fibres in the adventitia of human iliac arteries has a significant effect on their mechanical response.
</para>

<para>
The original paper reference is cited below:
</para>

<para>
Hyperelastic modelling of arterial layers with distributed collagen fibre orientations, T.C. Gasser, R.W. Ogden and G.A. Holzapfel, 2006,  <emphasis>Journal of the Royal Society</emphasis>, 3(6), 15-35.  <ulink url="http://www.ncbi.nlm.nih.gov/sites/entrez?cmd=Retrieve&amp;db=PubMed&amp;dopt=AbstractPlus&amp;list_uids=16849214">PubMed ID: 16849214</ulink>  </para>	 
</sect1>
</article>
</documentation>    

  <!-- Global units -->
  <units name="strain">
    <unit units="dimensionless"/>
  </units>
  <units name="stress">
    <unit units="dimensionless"/>
  </units>

  <component cmeta:id="interface" name="interface">

    
  
    <!-- Variables we expect to be set/controlled externally -->
    <variable units="strain" private_interface="out" name="Emm"/>
    <variable units="strain" private_interface="out" name="Emn"/>
    <variable units="strain" private_interface="out" name="Ems"/>
    <variable units="strain" private_interface="out" name="Enn"/>
    <variable units="strain" private_interface="out" name="Ens"/>
    <variable units="strain" private_interface="out" name="Ess"/>
    <variable units="strain" private_interface="out" name="c11" initial_value="0"/>
    <variable units="strain" private_interface="out" name="c12" initial_value="0"/>
    <variable units="strain" private_interface="out" name="c21" initial_value="0"/>
    <variable units="strain" private_interface="out" name="c22" initial_value="0"/>
    <variable units="strain" private_interface="out" name="c41" initial_value="0"/>
    <variable units="strain" private_interface="out" name="c42" initial_value="0"/>
    <variable units="strain" private_interface="out" name="c81" initial_value="0"/>
    <variable units="strain" private_interface="out" name="c82" initial_value="0"/>
    <variable units="strain" private_interface="out" name="kappa1" initial_value="0"/>
    <variable units="strain" private_interface="out" name="kappa2" initial_value="0"/>

     
    <!-- Variables we want to make available externally -->
    <variable units="stress" public_interface="out" private_interface="in" name="Tdevmm"/>
    <variable units="stress" public_interface="out" private_interface="in" name="Tdevmn"/>
    <variable units="stress" public_interface="out" private_interface="in" name="Tdevms"/>
    <variable units="stress" public_interface="out" private_interface="in" name="Tdevnn"/>
    <variable units="stress" public_interface="out" private_interface="in" name="Tdevns"/>
    <variable units="stress" public_interface="out" private_interface="in" name="Tdevss"/>
    
    </component> <!--interface-->

  <component cmeta:id="equations" name="equations">

    

    <!-- Inputs -->
    <variable units="strain" public_interface="in" name="Emm"/>
    <variable units="strain" public_interface="in" name="Enn"/>
    <variable units="strain" public_interface="in" name="Ess"/>
    <variable units="strain" public_interface="in" name="Emn"/>
    <variable units="strain" public_interface="in" name="Ems"/>
    <variable units="strain" public_interface="in" name="Ens"/>
    <variable units="strain" public_interface="in" name="c11"/>
    <variable units="strain" public_interface="in" name="c12"/>
    <variable units="strain" public_interface="in" name="c21"/>
    <variable units="strain" public_interface="in" name="c22"/>
    <variable units="strain" public_interface="in" name="c41"/>
    <variable units="strain" public_interface="in" name="c42"/>
    <variable units="strain" public_interface="in" name="c81"/>
    <variable units="strain" public_interface="in" name="c82"/>
    <variable units="strain" public_interface="in" name="kappa1"/>
    <variable units="strain" public_interface="in" name="kappa2"/>


     
    <!-- Outputs computed here -->
    <variable units="stress" public_interface="out" name="Tdevmm"/>
    <variable units="stress" public_interface="out" name="Tdevnn"/>
    <variable units="stress" public_interface="out" name="Tdevss"/>
    <variable units="stress" public_interface="out" name="Tdevmn"/>
    <variable units="stress" public_interface="out" name="Tdevms"/>
    <variable units="stress" public_interface="out" name="Tdevns"/>

    <!-- Temporary variables -->
    <variable units="strain" public_interface="none" private_interface="none" name="I1"/>
	
    <math xmlns="http://www.w3.org/1998/Math/MathML" cmeta:id="I1_calculation_eq">
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        <ci>I1</ci>
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            <ci>Emm</ci>
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            <ci>Ems</ci>
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              <ci>Enn</ci>
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    <variable units="strain" public_interface="none" private_interface="none" name="I4"/>
	
       
    <math xmlns="http://www.w3.org/1998/Math/MathML" cmeta:id="I4_calculation_eq">
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    <variable units="strain" public_interface="none" private_interface="none" name="I6"/>
	
    <math xmlns="http://www.w3.org/1998/Math/MathML" cmeta:id="I6_calculation_eq">
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    <variable units="strain" public_interface="none" private_interface="none" name="I8"/>
	   

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  <!--membrane-->

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    <map_variables variable_2="Emn" variable_1="Emn"/>
    <map_variables variable_2="Ems" variable_1="Ems"/>
    <map_variables variable_2="Enn" variable_1="Enn"/>
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    <map_variables variable_2="Ess" variable_1="Ess"/>
    <map_variables variable_2="Tdevmm" variable_1="Tdevmm"/>
    <map_variables variable_2="Tdevmn" variable_1="Tdevmn"/>
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    <map_variables variable_2="Tdevss" variable_1="Tdevss"/>
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