Location: Mackenzie, Loo, Panayotova-Heiermann and Wright, 1996 @ 9e1413fd9151 / experiments / figure-03-sedml.xml

Author:
David Nickerson <nickerso@users.sourceforge.net>
Date:
2016-03-24 16:26:13+13:00
Desc:
adding protein module keyword
Permanent Source URI:
https://models.cellml.org/workspace/mackenzie_loo_panayotova-heiermann_wright_1996/rawfile/9e1413fd915169aa9390c97e20c5e3884a020916/experiments/figure-03-sedml.xml

<?xml version="1.0" encoding="utf-8"?>
<sedML xmlns="http://sed-ml.org/" xmlns:math="http://www.w3.org/1998/Math/MathML"
	level="1" version="1">
	<listOfSimulations>
		<uniformTimeCourse id="simulation" initialTime="0"
			outputStartTime="0" outputEndTime="100.0"
			numberOfPoints="1000">
			<algorithm kisaoID="KISAO:0000019" />
		</uniformTimeCourse>
	</listOfSimulations>
	<listOfModels>
		<model id="model" name="Mackenzie Model" language="urn:sedml:language:cellml"
			source="figure-03.xml" />
	</listOfModels>

	<listOfTasks>
		<task id="task1" name="Mackenzie Task" modelReference="model"
			simulationReference="simulation" />
	</listOfTasks>
	<listOfDataGenerators>
		<dataGenerator id="dgV" name="V">
			<listOfVariables>
				<variable id="V" taskReference="task"
					target="/cellml:model/cellml:component[@name='variables_1']/cellml:variable[@name='V']" />
			</listOfVariables>
			<math:math>
				<math:ci>V</math:ci>
			</math:math>
		</dataGenerator>
		<dataGenerator id="dgKhalf_gluc1" name="Khalf_glucose">
			<listOfVariables>
				<variable id="Khalf_gluc1" taskReference="task"
					target="/cellml:model/cellml:component[@name='variables_1']/cellml:variable[@name='Khalf_gluc']" />
			</listOfVariables>
			<math:math>
				<math:ci>Khalf_gluc1</math:ci>
			</math:math>
		</dataGenerator>
		<dataGenerator id="dgKhalf_gluc2" name="Khalf_glucose">
			<listOfVariables>
				<variable id="Khalf_gluc2" taskReference="task"
					target="/cellml:model/cellml:component[@name='variables_2']/cellml:variable[@name='Khalf_gluc']" />
			</listOfVariables>
			<math:math>
				<math:ci>Khalf_gluc2</math:ci>
			</math:math>
		</dataGenerator>
		<dataGenerator id="dgKhalf_Na3" name="Khalf_Na">
			<listOfVariables>
				<variable id="Khalf_Na3" taskReference="task"
					target="/cellml:model/cellml:component[@name='variables_3']/cellml:variable[@name='Khalf_Na']" />
			</listOfVariables>
			<math:math>
				<math:ci>Khalf_Na3</math:ci>
			</math:math>
		</dataGenerator>
		<dataGenerator id="dgKhalf_Na4" name="Khalf_Na">
			<listOfVariables>
				<variable id="Khalf_Na4" taskReference="task"
					target="/cellml:model/cellml:component[@name='variables_4']/cellml:variable[@name='Khalf_Na']" />
			</listOfVariables>
			<math:math>
				<math:ci>Khalf_Na4</math:ci>
			</math:math>
		</dataGenerator>
		<dataGenerator id="dgKhalf_Na5" name="Khalf_Na">
			<listOfVariables>
				<variable id="Khalf_Na5" taskReference="task"
					target="/cellml:model/cellml:component[@name='variables_5']/cellml:variable[@name='Khalf_Na']" />
			</listOfVariables>
			<math:math>
				<math:ci>Khalf_Na5</math:ci>
			</math:math>
		</dataGenerator>
		<dataGenerator id="dgImax_gluc1" name="Imax_gluc">
			<listOfVariables>
				<variable id="Imax_gluc1" taskReference="task"
					target="/cellml:model/cellml:component[@name='variables_1']/cellml:variable[@name='Imax_gluc']" />
			</listOfVariables>
			<math:math>
				<math:ci>Imax_gluc1</math:ci>
			</math:math>
		</dataGenerator>
		<dataGenerator id="dgImax_gluc2" name="Imax_gluc">
			<listOfVariables>
				<variable id="Imax_gluc2" taskReference="task"
					target="/cellml:model/cellml:component[@name='variables_2']/cellml:variable[@name='Imax_gluc']" />
			</listOfVariables>
			<math:math>
				<math:ci>Imax_gluc2</math:ci>
			</math:math>
		</dataGenerator>
		<dataGenerator id="dgImax_Na3" name="Imax_Na">
			<listOfVariables>
				<variable id="Imax_Na3" taskReference="task"
					target="/cellml:model/cellml:component[@name='variables_3']/cellml:variable[@name='Imax_Na']" />
			</listOfVariables>
			<math:math>
				<math:ci>Imax_Na3</math:ci>
			</math:math>
		</dataGenerator>
		<dataGenerator id="dgImax_Na4" name="Imax_Na">
			<listOfVariables>
				<variable id="Imax_Na4" taskReference="task"
					target="/cellml:model/cellml:component[@name='variables_4']/cellml:variable[@name='Imax_Na']" />
			</listOfVariables>
			<math:math>
				<math:ci>Imax_Na4</math:ci>
			</math:math>
		</dataGenerator>
		<dataGenerator id="dgImax_Na5" name="Imax_Na">
			<listOfVariables>
				<variable id="Imax_Na5" taskReference="task"
					target="/cellml:model/cellml:component[@name='variables_5']/cellml:variable[@name='Imax_Na']" />
			</listOfVariables>
			<math:math>
				<math:ci>Imax_Na5</math:ci>
			</math:math>
		</dataGenerator>
	</listOfDataGenerators>

	<listOfOutputs>
		<plot2D id="plot1" name="Khalf_gluc">
			<listOfCurves>
				<curve id="c1" logX="false" logY="false" xDataReference="dgV"
					yDataReference="dgKhalf_gluc1" />
				<curve id="c2" logX="false" logY="false" xDataReference="dgV"
					yDataReference="dgKhalf_gluc2" />
			</listOfCurves>
		</plot2D>
		<plot2D id="plot2" name="Khalf_Na">
			<listOfCurves>
				<curve id="c3" logX="false" logY="false" xDataReference="dgV"
					yDataReference="dgKhalf_Na3" />
				<curve id="c4" logX="false" logY="false" xDataReference="dgV"
					yDataReference="dgKhalf_Na4" />
				<curve id="c5" logX="false" logY="false" xDataReference="dgV"
					yDataReference="dgKhalf_Na5" />
			</listOfCurves>
		</plot2D>
		<plot2D id="plot3" name="Imax_gluc">
			<listOfCurves>
				<curve id="c6" logX="false" logY="false" xDataReference="dgV"
					yDataReference="dgImax_gluc1" />
				<curve id="c7" logX="false" logY="false" xDataReference="dgV"
					yDataReference="dgImax_gluc2" />
			</listOfCurves>
		</plot2D>
		<plot2D id="plot4" name="Imax_Na">
			<listOfCurves>
				<curve id="c8" logX="false" logY="false" xDataReference="dgV"
					yDataReference="dgImax_Na3" />
				<curve id="c9" logX="false" logY="false" xDataReference="dgV"
					yDataReference="dgImax_Na4" />
				<curve id="c10" logX="false" logY="false" xDataReference="dgV"
					yDataReference="dgImax_Na5" />
			</listOfCurves>
		</plot2D>
	</listOfOutputs>
</sedML>