- Author:
- David Nickerson <nickerso@users.sourceforge.net>
- Date:
- 2016-03-24 16:26:13+13:00
- Desc:
- adding protein module keyword
- Permanent Source URI:
- https://models.cellml.org/workspace/mackenzie_loo_panayotova-heiermann_wright_1996/rawfile/9e1413fd915169aa9390c97e20c5e3884a020916/experiments/figure-04.xml
<?xml version='1.0'?>
<model name="figure_04" xmlns="http://www.cellml.org/cellml/1.1#" xmlns:cellml="http://www.cellml.org/cellml/1.1#" xmlns:cmeta="http://www.cellml.org/metadata/1.0#" xmlns:xlink="http://www.w3.org/1999/xlink">
<import xlink:href="figure-03-base.xml">
<component component_ref="variables" name="model"/>
</import>
<units name="nC">
<unit prefix="nano" units="coulomb"/>
</units>
<import xlink:href="../decomposed-model/mackenzie_1996_units_model.xml">
<units name="M" units_ref="M"/>
<units name="volt" units_ref="volt"/>
<units name="second" units_ref="second"/>
<units name="uA" units_ref="uA"/>
<units name="C_per_mol" units_ref="C_per_mol"/>
<units name="J_per_K_per_mol" units_ref="J_per_K_per_mol"/>
<units name="kelvin" units_ref="kelvin"/>
</import>
<component cmeta:id="Q_component" name="Q">
<variable cmeta:id="Q" initial_value="0" name="Q" public_interface="out" units="nC"/>
<variable cmeta:id="Q_hyp" initial_value="0" name="Q_hyp" public_interface="out" units="nC"/>
<variable cmeta:id="Q_max" initial_value="11" name="Q_max" public_interface="out" units="nC"/>
<variable cmeta:id="V_m" name="V" public_interface="in" units="volt"/>
<variable cmeta:id="V_half" initial_value="-34e-3" name="V" public_interface="out" units="volt"/>
<variable cmeta:id="z" initial_value="1" name="z" public_interface="out" units="dimensionless"/>
<variable cmeta:id="F" initial_value="96485.34" name="F" public_interface="out" units="C_per_mol"/>
<variable cmeta:id="R" initial_value="8.314" name="R" public_interface="out" units="J_per_K_per_mol"/>
<variable cmeta:id="T" initial_value="310" name="T" public_interface="out" units="kelvin"/>
<math xmlns="http://www.w3.org/1998/Math/MathML">
<apply>
<eq/>
<ci>Q</ci>
<apply>
<plus/>
<apply>
<divide/>
<ci>Q_max</ci>
<apply>
<exp/>
<apply>
<plus/>
<cn cellml:units="dimensionless">1</cn>
<apply>
<times/>
<apply>
<divide/>
<apply>
<times/>
<ci>z</ci>
<apply>
<minus/>
<ci>V_m</ci>
<ci>V_half</ci>
</apply>
<ci>F</ci>
</apply>
<ci>R</ci>
</apply>
<ci>T</ci>
</apply>
</apply>
</apply>
</apply>
<ci>Q_hyp</ci>
</apply>
</apply>
</math>
</component>
<component cmeta:id="variables" name="variables">
<variable cmeta:id="Na_i" initial_value="10e-3" name="Na_i" public_interface="out" units="M"/>
<variable cmeta:id="Na_o" initial_value="5e-3" name="Na_o" public_interface="out" units="M"/>
<variable cmeta:id="glucose_i" initial_value="0.0" name="glucose_i" public_interface="out" units="M"/>
<variable cmeta:id="glucose_o" initial_value="1.0e-3" name="glucose_o" public_interface="out" units="M"/>
<variable cmeta:id="time" name="time" public_interface="in" units="second"/>
<variable cmeta:id="V" name="V" public_interface="in" units="volt"/>
<variable cmeta:id="Imax_Na" name="Imax_Na" public_interface="in" units="uA"/>
<variable cmeta:id="Imax_gluc" name="Imax_gluc" public_interface="in" units="uA"/>
<variable cmeta:id="Khalf_Na" name="Khalf_Na" public_interface="in" units="M"/>
<variable cmeta:id="Khalf_gluc" name="Khalf_gluc" public_interface="in" units="M"/>
</component>
<connection>
<map_components component_1="Q_comp" component_2="model"/>
<map_variables variable_1="F" variable_2="F"/>
<map_variables variable_1="R" variable_2="R"/>
<map_variables variable_1="T" variable_2="T"/>
<map_variables variable_1="V" variable_2="V"/>
</connection>
<connection>
<map_components component_1="variables" component_2="model"/>
<map_variables variable_1="Na_i" variable_2="Na_i"/>
<map_variables variable_1="Na_o" variable_2="Na_o"/>
<map_variables variable_1="glucose_i" variable_2="glucose_i"/>
<map_variables variable_1="glucose_o" variable_2="glucose_o"/>
<map_variables variable_1="V" variable_2="V"/>
<map_variables variable_1="time" variable_2="time"/>
<map_variables variable_1="Imax_Na" variable_2="Imax_Na"/>
<map_variables variable_1="Imax_gluc" variable_2="Imax_gluc"/>
<map_variables variable_1="Khalf_Na" variable_2="Khalf_Na"/>
<map_variables variable_1="Khalf_gluc" variable_2="Khalf_gluc"/>
</connection>
</model>
