Location: Mackenzie, Loo, Panayotova-Heiermann and Wright, 1996 @ b0a32e5099ae / decomposed-model / parameters_model.xml

Author:
David Nickerson <nickerso@users.sourceforge.net>
Date:
2015-02-27 21:27:56+13:00
Desc:
adding a preliminary documentation page which includes the previous tmp-doc generated documentation and some annotations
Permanent Source URI:
https://models.cellml.org/workspace/mackenzie_loo_panayotova-heiermann_wright_1996/rawfile/b0a32e5099ae46cec773763490f3c6a48d4a2d4c/decomposed-model/parameters_model.xml

<?xml version="1.0"?>
<model xmlns="http://www.cellml.org/cellml/1.1#" name="parameters_model">
  <component name="parameters">
    <variable name="k0_12" private_interface="out" public_interface="in" units="per_M_per_second"/>
    <variable name="k0_21" private_interface="out" public_interface="in" units="per_second"/>
    <variable name="k0_23" private_interface="out" public_interface="in" units="per_M_per_second"/>
    <variable name="k0_32" private_interface="out" public_interface="in" units="per_second"/>
    <variable name="k0_34" private_interface="out" public_interface="in" units="per_second"/>
    <variable name="k0_43" private_interface="out" public_interface="in" units="per_second"/>
    <variable name="k0_45" private_interface="out" public_interface="in" units="per_second"/>
    <variable name="k0_54" private_interface="out" public_interface="in" units="per_M_per_second"/>
    <variable name="k0_25" private_interface="out" public_interface="in" units="per_second"/>
    <variable name="k0_52" private_interface="out" public_interface="in" units="per_second"/>
    <variable name="k0_56" private_interface="out" public_interface="in" units="per_second"/>
    <variable name="k0_65" private_interface="out" public_interface="in" units="per_M_per_second"/>
    <variable name="k0_61" private_interface="out" public_interface="in" units="per_second"/>
    <variable name="k0_16" private_interface="out" public_interface="in" units="per_second"/>
    <variable name="delta" private_interface="out" public_interface="in" units="dimensionless"/>
    <variable name="alpha_p" private_interface="out" public_interface="out" units="dimensionless"/>
    <variable name="alpha_pp" private_interface="out" public_interface="in" units="dimensionless"/>
    <variable name="N_C" private_interface="out" public_interface="in" units="dimensionless"/>
    <variable name="N_Avo" private_interface="out" public_interface="in" units="per_mol"/>
    <variable name="area" private_interface="out" public_interface="in" units="um2"/>
    <variable name="C_T" private_interface="out" public_interface="out" units="umol"/>
    <variable name="n" private_interface="out" public_interface="in" units="dimensionless"/>
    <variable name="z_c" private_interface="out" public_interface="in" units="dimensionless"/>
    <variable name="z_Na" private_interface="out" public_interface="in" units="dimensionless"/>
    <variable name="F" private_interface="out" public_interface="in" units="C_per_mol"/>
    <variable name="R" private_interface="out" public_interface="in" units="J_per_K_per_mol"/>
    <variable name="T" private_interface="out" public_interface="in" units="kelvin"/>
    <variable name="V" private_interface="out" public_interface="in" units="volt"/>
    <variable name="mu" private_interface="out" public_interface="out" units="dimensionless"/>
    <math xmlns="http://www.w3.org/1998/Math/MathML">
        <apply>
           <eq/>
           <ci>alpha_p</ci>
           <apply>
              <minus/>
              <apply>
                 <minus/>
                 <cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" cellml:units="dimensionless">1</cn>
                 <ci>delta</ci>
              </apply>
              <ci>alpha_pp</ci>
           </apply>
        </apply>
        <apply>
           <eq/>
           <ci>C_T</ci>
           <apply>
              <divide/>
              <apply>
                 <times/>
                 <cn xmlns:cellml="http://www.cellml.org/cellml/1.1#" type="e-notation" cellml:units="umol_per_mol">1   <sep/>
                 6</cn>
                 <ci>N_C</ci>
              </apply>
              <ci>N_Avo</ci>
           </apply>
        </apply>
        <apply>
           <eq/>
           <ci>mu</ci>
           <apply>
              <divide/>
              <apply>
                 <times/>
                 <ci>F</ci>
                 <ci>V</ci>
              </apply>
              <apply>
                 <times/>
                 <ci>R</ci>
                 <ci>T</ci>
              </apply>
           </apply>
        </apply>
     </math>
  </component>
  <import xmlns:xlink="http://www.w3.org/1999/xlink" xlink:href="mackenzie_1996_units_model.xml">
    <units name="per_second" units_ref="per_second"/>
    <units name="per_second5" units_ref="per_second5"/>
    <units name="per_mol" units_ref="per_mol"/>
    <units name="umol" units_ref="umol"/>
    <units name="M" units_ref="M"/>
    <units name="um2" units_ref="um2"/>
    <units name="mol_per_um2" units_ref="mol_per_um2"/>
    <units name="mM" units_ref="mM"/>
    <units name="mV" units_ref="mV"/>
    <units name="J_per_K_per_mol" units_ref="J_per_K_per_mol"/>
    <units name="pA_per_cm2" units_ref="pA_per_cm2"/>
    <units name="uA" units_ref="uA"/>
    <units name="uA_per_um2" units_ref="uA_per_um2"/>
    <units name="uA_per_A" units_ref="uA_per_A"/>
    <units name="umol_per_mol" units_ref="umol_per_mol"/>
    <units name="umol_per_second" units_ref="umol_per_second"/>
    <units name="C_per_mol" units_ref="C_per_mol"/>
    <units name="per_M2_per_second" units_ref="per_M2_per_second"/>
    <units name="M2" units_ref="M2"/>
    <units name="M3" units_ref="M3"/>
    <units name="M2_per_second" units_ref="M2_per_second"/>
    <units name="per_M2_per_second5" units_ref="per_M2_per_second5"/>
    <units name="M_per_second" units_ref="M_per_second"/>
    <units name="per_M_per_second" units_ref="per_M_per_second"/>
    <units name="volt_per_second" units_ref="volt_per_second"/>
  </import>
</model>