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Maurya, Bornheimer, Venkatasubramanian, Subramaniam, 2005
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Reduced-order modelling of biochemical networks: application to the GTPase-cycle signalling module
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Model Mathematics
Component based math viewer is available
Component: environment
Component: differentials
d
d
time
A
=
-
A2
+
A3
+
A5
d
d
time
G
=
D1
-
T1
d
d
time
GA
=
D2
-
R4
d
d
time
T
=
-
T1
+
T3
+
T4
d
d
time
R
=
-
R2
+
R3
+
R4
d
d
time
GT
=
T1
-
P1
-
R2
-
A2
d
d
time
GD
=
P1
-
D1
-
A3
-
R3
d
d
time
Pi_
=
P1
+
P3
+
P2
+
P4
d
d
time
D
=
D1
+
D3
+
D2
+
D4
d
d
time
RG
=
-
T3
+
D3
d
d
time
RGT
=
T3
+
R2
-
P3
-
A5
d
d
time
GAT
=
A2
-
P2
d
d
time
GAD
=
A3
+
P2
-
D2
d
d
time
RGD
=
R3
+
P3
-
D3
d
d
time
RGA
=
R4
-
T4
+
D4
d
d
time
RGAT
=
T4
+
A5
-
P4
d
d
time
RGAD
=
P4
-
D4
Component: output
Z
=
GT
+
RGT
+
RGAT
+
GAT
G_tot
v
=
P_minus4
RGAT
+
P_minus2
GAT
+
P_minus3
RGT
+
P_minus1
GT
G_tot
Component: T1
T1
=
k1
G
T
Component: P1
P1
=
k1
GT
Component: D1
D1
=
k1
GD
Component: T3
T3
=
k1
RG
T
Component: R2
R2
=
-
k2
RGT
Component: A2
A2
=
k1
GT
A
Component: A3
A3
=
-
k2
GAD
Component: R3
R3
=
k1
GD
R
Component: P3
P3
=
k1
RGT
Component: D3
D3
=
k1
RGD
Component: P2
P2
=
k1
GAT
Component: D2
D2
=
k1
GAD
Component: R4
R4
=
k1
GA
R
Component: T4
T4
=
k1
RGA
T
Component: A5
A5
=
k1
RGT
A
Component: P4
P4
=
k1
RGAT
Component: D4
D4
=
k1
RGAD
Source
Derived from workspace
Maurya et al. 2005
at changeset
ef66087f6377
.
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This work is licensed under a
Creative Commons Attribution 3.0 Unported License
.
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Reduced-order modelling of biochemical networks: application to the GTPase-cycle signalling module