Generated Code

The following is c_ida code generated by the CellML API from this CellML file. (Back to language selection)

The raw code is available.

/*
   There are a total of 7 entries in the algebraic variable array.
   There are a total of 5 entries in each of the rate and state variable arrays.
   There are a total of 42 entries in the constant variable array.
 */
/*
 * CONSTANTS[0] is V_init in component Vstim_para (mV).
 * CONSTANTS[1] is V_rate in component Vstim_para (mV_per_s).
 * CONSTANTS[2] is Nai in component control_para (mM).
 * CONSTANTS[3] is Cai in component control_para (mM).
 * CONSTANTS[4] is inhPump in component control_para (dimensionless).
 * CONSTANTS[5] is K_Cahalf in component control_para (mV).
 * VOI is time in component time_s (second).
 * STATES[0] is V in component vramp_protocol_s (mV).
 * ALGEBRAIC[6] is J_VOCC in component J_VOCC (mM_per_s).
 * CONSTANTS[36] is J_CaPump in component J_CaPump (mM_per_s).
 * ALGEBRAIC[1] is J_NaCa in component J_NaCa (mM_per_s).
 * ALGEBRAIC[0] is rho_vCa in component J_VOCC (dimensionless).
 * CONSTANTS[37] is K_1 in component K_1 (per_s).
 * ALGEBRAIC[3] is stress in component CB4HM (dimensionless).
 * ALGEBRAIC[4] is phosphorylation in component CB4HM (dimensionless).
 * CONSTANTS[6] is R in component constants (J_per_K_mol).
 * CONSTANTS[7] is F in component constants (C_per_mmol).
 * CONSTANTS[8] is T in component model_para (kelvin).
 * CONSTANTS[9] is Nao in component model_para (mM).
 * CONSTANTS[10] is Cao in component model_para (mM).
 * CONSTANTS[11] is V_cell in component model_para (fm3).
 * CONSTANTS[12] is V_Cahalf in component model_para (mV).
 * CONSTANTS[13] is g_mCa in component model_para (nS).
 * CONSTANTS[14] is V_pmax in component model_para (mM_per_s).
 * CONSTANTS[15] is n in component model_para (dimensionless).
 * CONSTANTS[16] is K_ph in component model_para (mM).
 * CONSTANTS[17] is K_NaCa in component model_para (mM).
 * CONSTANTS[18] is G_NaCa in component model_para (mM_per_s_mV).
 * CONSTANTS[19] is n_M in component model_para (dimensionless).
 * CONSTANTS[20] is Ca_halfMLCK in component model_para (mM).
 * CONSTANTS[21] is M_init in component initials (dimensionless).
 * CONSTANTS[22] is Mp_init in component initials (dimensionless).
 * CONSTANTS[23] is AM_init in component initials (dimensionless).
 * CONSTANTS[24] is AMp_init in component initials (dimensionless).
 * CONSTANTS[25] is K_7 in component model_para (per_s).
 * CONSTANTS[26] is K_2 in component model_para (per_s).
 * CONSTANTS[27] is K_3 in component model_para (per_s).
 * CONSTANTS[28] is K_4 in component model_para (per_s).
 * CONSTANTS[29] is K_5 in component model_para (per_s).
 * CONSTANTS[30] is Nai in component model_para (mM).
 * CONSTANTS[31] is K_Cahalf in component model_para (mV).
 * CONSTANTS[32] is inhPump in component model_para (dimensionless).
 * CONSTANTS[33] is Cai_init in component initials (mM).
 * CONSTANTS[34] is z_Ca in component E_Ca (dimensionless).
 * CONSTANTS[39] is E in component Nernst_potential (mV).
 * CONSTANTS[35] is z_Na in component E_Na (dimensionless).
 * CONSTANTS[38] is E in component Nernst_potential (mV).
 * ALGEBRAIC[5] is I in component Ionic_currents (pA).
 * CONSTANTS[40] is V_mNaCa in component J_NaCa (mV).
 * ALGEBRAIC[2] is norm in component CB4HM (dimensionless).
 * STATES[1] is M in component CB4HM (dimensionless).
 * STATES[2] is Mp in component CB4HM (dimensionless).
 * STATES[3] is AM in component CB4HM (dimensionless).
 * STATES[4] is AMp in component CB4HM (dimensionless).
 * RATES[0] is d/dt V in component vramp_protocol_s (mV).
 * RATES[1] is d/dt M in component CB4HM (dimensionless).
 * RATES[2] is d/dt Mp in component CB4HM (dimensionless).
 * RATES[3] is d/dt AM in component CB4HM (dimensionless).
 * RATES[4] is d/dt AMp in component CB4HM (dimensionless).
 * There are a total of 0 condition variables.
 */
void
initConsts(double* CONSTANTS, double* RATES, double *STATES)
{
CONSTANTS[0] = -100;
CONSTANTS[1] = 1;
CONSTANTS[2] = 16.55;
CONSTANTS[3] = 0.0001;
CONSTANTS[4] = 1;
CONSTANTS[5] = 11;
CONSTANTS[6] = 8.314;
CONSTANTS[7] = 96.48534;
CONSTANTS[8] = 310;
CONSTANTS[9] = 140;
CONSTANTS[10] = 2;
CONSTANTS[11] = 21;
CONSTANTS[12] = -27;
CONSTANTS[13] = 0.046842;
CONSTANTS[14] = 5.1449e-4;
CONSTANTS[15] = 1.9015;
CONSTANTS[16] = 0.6e-3;
CONSTANTS[17] = 7e-3;
CONSTANTS[18] = 5.7297e-5;
CONSTANTS[19] = 8.7613;
CONSTANTS[20] = 256.98e-6;
CONSTANTS[21] = 1;
CONSTANTS[22] = 0;
CONSTANTS[23] = 0;
CONSTANTS[24] = 0;
CONSTANTS[25] = 0.0378;
CONSTANTS[26] = 1.2387;
CONSTANTS[27] = 0.1419;
CONSTANTS[28] = 0.035475;
CONSTANTS[29] = 1.2387;
CONSTANTS[30] = 2.9836;
CONSTANTS[31] = 11;
CONSTANTS[32] = 1;
CONSTANTS[33] = 0.1e-6;
CONSTANTS[34] = 2;
CONSTANTS[35] = 1;
CONSTANTS[36] = ( - CONSTANTS[14]*pow(CONSTANTS[3], CONSTANTS[15]))/(pow(CONSTANTS[16], CONSTANTS[15])+pow(CONSTANTS[3], CONSTANTS[15]));
CONSTANTS[37] =  (pow(CONSTANTS[3], CONSTANTS[19])/(pow(CONSTANTS[20], CONSTANTS[19])+pow(CONSTANTS[3], CONSTANTS[19])))*1.00000;
CONSTANTS[38] =  (( CONSTANTS[6]*CONSTANTS[8])/( CONSTANTS[35]*CONSTANTS[7]))*log(CONSTANTS[9]/CONSTANTS[2]);
CONSTANTS[41] = CONSTANTS[1];
CONSTANTS[39] =  (( CONSTANTS[6]*CONSTANTS[8])/( CONSTANTS[34]*CONSTANTS[7]))*log(CONSTANTS[10]/CONSTANTS[3]);
CONSTANTS[40] =  3.00000*CONSTANTS[38] -  2.00000*CONSTANTS[39];
STATES[0] = CONSTANTS[0];
STATES[1] = CONSTANTS[21];
STATES[2] = CONSTANTS[22];
STATES[3] = CONSTANTS[23];
STATES[4] = CONSTANTS[24];
RATES[1] = 0.1001;
RATES[2] = 0.1001;
RATES[3] = 0.1001;
RATES[4] = 0.1001;
}
void
computeResiduals(double VOI, double* CONSTANTS, double* RATES, double* OLDRATES, double* STATES,
                 double* OLDSTATES, double* ALGEBRAIC, double* CONDVARS)
{
resid[0] = RATES[1] - ( - CONSTANTS[37]*STATES[1])/ALGEBRAIC[2]+( CONSTANTS[26]*STATES[2])/ALGEBRAIC[2]+( CONSTANTS[25]*STATES[3])/ALGEBRAIC[2];
resid[1] = RATES[2] - (( CONSTANTS[28]*STATES[4])/ALGEBRAIC[2]+( CONSTANTS[37]*STATES[1])/ALGEBRAIC[2]) - ( (CONSTANTS[26]+CONSTANTS[27])*STATES[2])/ALGEBRAIC[2];
resid[2] = RATES[3] - ( CONSTANTS[29]*STATES[4])/ALGEBRAIC[2] - ( (CONSTANTS[37]+CONSTANTS[25])*STATES[3])/ALGEBRAIC[2];
resid[3] = RATES[4] - (( CONSTANTS[27]*STATES[2])/ALGEBRAIC[2]+( CONSTANTS[37]*STATES[3])/ALGEBRAIC[2]) - ( (CONSTANTS[28]+CONSTANTS[29])*STATES[4])/ALGEBRAIC[2];
resid[4] = RATES[0] - CONSTANTS[41];
}
void
computeVariables(double VOI, double* CONSTANTS, double* RATES, double* STATES, double* ALGEBRAIC)
{
ALGEBRAIC[0] = 1.00000/(1.00000+exp((CONSTANTS[12] - STATES[0])/CONSTANTS[5]));
ALGEBRAIC[1] =  (( CONSTANTS[18]*CONSTANTS[3])/(CONSTANTS[3]+CONSTANTS[17]))*(STATES[0] - CONSTANTS[40]);
ALGEBRAIC[3] = STATES[4]+STATES[3];
ALGEBRAIC[4] = STATES[4]+STATES[2];
ALGEBRAIC[5] =  CONSTANTS[13]*ALGEBRAIC[0]*(STATES[0] - CONSTANTS[39]);
ALGEBRAIC[6] = - ALGEBRAIC[5]/( 2.00000*CONSTANTS[11]*CONSTANTS[7]);
}
void
computeEssentialVariables(double VOI, double* CONSTANTS, double* RATES, double* STATES, double* ALGEBRAIC)
{
ALGEBRAIC[2] = STATES[1]+STATES[2]+STATES[3]+STATES[4];
}
void
getStateInformation(double* SI)
{
SI[0] = 1.0;
SI[1] = 1.0;
SI[2] = 1.0;
SI[3] = 1.0;
SI[4] = 1.0;
}
void
computeRoots(double VOI, double* CONSTANTS, double* RATES, double* OLDRATES, double* STATES,
             double* OLDSTATES, double* ALGEBRAIC, double* CONDVARS)
{
}