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Model Mathematics
Component based math viewer is available
Component: environment
d
d
t
q_Ca_o
=
v_Ca_o_LCC
d
d
t
q_Ca_i
=
v_Ca_i_LCC
d
d
t
q_K_o
=
v_K_o_LCC
d
d
t
q_K_i
=
v_K_i_LCC
d
d
t
q_mem
=
I_mem_LCC
Component: LCC_parameters
Component: LCC
V_mem
=
q_mem
C_m
mu_Ca_o
=
R
T
ln
K_Ca_o
q_Ca_o
mu_Ca_i
=
R
T
ln
K_Ca_i
q_Ca_i
mu_K_o
=
R
T
ln
K_K_o
q_K_o
mu_K_i
=
R
T
ln
K_K_i
q_K_i
mu_S000_LCC
=
R
T
ln
K_000_LCC
q_S000_LCC
mu_S001_LCC
=
R
T
ln
K_001_LCC
q_S001_LCC
mu_S010_LCC
=
R
T
ln
K_010_LCC
q_S010_LCC
mu_S011_LCC
=
R
T
ln
K_011_LCC
q_S011_LCC
mu_S020_LCC
=
R
T
ln
K_020_LCC
q_S020_LCC
mu_S021_LCC
=
R
T
ln
K_021_LCC
q_S021_LCC
mu_S100_LCC
=
R
T
ln
K_100_LCC
q_S100_LCC
mu_S101_LCC
=
R
T
ln
K_101_LCC
q_S101_LCC
mu_S110_LCC
=
R
T
ln
K_110_LCC
q_S110_LCC
mu_S111_LCC
=
R
T
ln
K_111_LCC
q_S111_LCC
mu_S120_LCC
=
R
T
ln
K_120_LCC
q_S120_LCC
mu_S121_LCC
=
R
T
ln
K_121_LCC
q_S121_LCC
v_d000
=
kappa_d000
ⅇ
Af_d000
R
T
-
ⅇ
Ar_d000
R
T
v_d001
=
kappa_d001
ⅇ
Af_d001
R
T
-
ⅇ
Ar_d001
R
T
v_d010
=
kappa_d010
ⅇ
Af_d010
R
T
-
ⅇ
Ar_d010
R
T
v_d011
=
kappa_d011
ⅇ
Af_d011
R
T
-
ⅇ
Ar_d011
R
T
v_d020
=
kappa_d020
ⅇ
Af_d020
R
T
-
ⅇ
Ar_d020
R
T
v_d021
=
kappa_d021
ⅇ
Af_d021
R
T
-
ⅇ
Ar_d021
R
T
v_f1_000
=
kappa_f1_000
ⅇ
Af_f1_000
R
T
-
ⅇ
Ar_f1_000
R
T
v_f1_001
=
kappa_f1_001
ⅇ
Af_f1_001
R
T
-
ⅇ
Ar_f1_001
R
T
v_f1_100
=
kappa_f1_100
ⅇ
Af_f1_100
R
T
-
ⅇ
Ar_f1_100
R
T
v_f1_101
=
kappa_f1_101
ⅇ
Af_f1_101
R
T
-
ⅇ
Ar_f1_101
R
T
v_f2_000
=
kappa_f2_000
ⅇ
Af_f2_000
R
T
-
ⅇ
Ar_f2_000
R
T
v_f2_001
=
kappa_f2_001
ⅇ
Af_f2_001
R
T
-
ⅇ
Ar_f2_001
R
T
v_f2_100
=
kappa_f2_100
ⅇ
Af_f2_100
R
T
-
ⅇ
Ar_f2_100
R
T
v_f2_101
=
kappa_f2_101
ⅇ
Af_f2_101
R
T
-
ⅇ
Ar_f2_101
R
T
v_f3_010
=
kappa_f3_010
ⅇ
Af_f3_010
R
T
-
ⅇ
Ar_f3_010
R
T
v_f3_011
=
kappa_f3_011
ⅇ
Af_f3_011
R
T
-
ⅇ
Ar_f3_011
R
T
v_f3_110
=
kappa_f3_110
ⅇ
Af_f3_110
R
T
-
ⅇ
Ar_f3_110
R
T
v_f3_111
=
kappa_f3_111
ⅇ
Af_f3_111
R
T
-
ⅇ
Ar_f3_111
R
T
v_fCa00
=
kappa_fCa000
ⅇ
Af_fCa00
R
T
-
ⅇ
Ar_fCa00
R
T
v_fCa01
=
kappa_fCa010
ⅇ
Af_fCa01
R
T
-
ⅇ
Ar_fCa01
R
T
v_fCa02
=
kappa_fCa020
ⅇ
Af_fCa02
R
T
-
ⅇ
Ar_fCa02
R
T
v_fCa10
=
kappa_fCa100
ⅇ
Af_fCa10
R
T
-
ⅇ
Ar_fCa10
R
T
v_fCa11
=
kappa_fCa110
ⅇ
Af_fCa11
R
T
-
ⅇ
Ar_fCa11
R
T
v_fCa12
=
kappa_fCa120
ⅇ
Af_fCa12
R
T
-
ⅇ
Ar_fCa12
R
T
Af_LCC_Ca1
=
mu_Ca_i
+
zCa
F
V_mem
+
mu_S111_LCC
Af_LCC_Ca2
=
mu_Ca_i
+
zCa
F
V_mem
+
mu_S121_LCC
Af_LCC_K1
=
mu_K_i
+
zK
F
V_mem
+
mu_S111_LCC
Af_LCC_K2
=
mu_K_i
+
zK
F
V_mem
+
mu_S121_LCC
Af_d000
=
R
T
ln
K_000_LCC
q_S000_LCC
+
z_fd
F
V_mem
Af_d001
=
R
T
ln
K_001_LCC
q_S001_LCC
+
z_fd
F
V_mem
Af_d010
=
R
T
ln
K_010_LCC
q_S010_LCC
+
z_fd
F
V_mem
Af_d011
=
R
T
ln
K_011_LCC
q_S011_LCC
+
z_fd
F
V_mem
Af_d020
=
R
T
ln
K_020_LCC
q_S020_LCC
+
z_fd
F
V_mem
Af_d021
=
R
T
ln
K_021_LCC
q_S021_LCC
+
z_fd
F
V_mem
Af_f1_000
=
R
T
ln
K_000_LCC
q_S000_LCC
+
z_ff1
F
V_mem
Af_f1_001
=
R
T
ln
K_001_LCC
q_S001_LCC
+
z_ff1
F
V_mem
Af_f1_100
=
R
T
ln
K_100_LCC
q_S100_LCC
+
z_ff1
F
V_mem
Af_f1_101
=
R
T
ln
K_101_LCC
q_S101_LCC
+
z_ff1
F
V_mem
Af_f2_000
=
R
T
ln
K_000_LCC
q_S000_LCC
+
z_ff2
F
V_mem
Af_f2_001
=
R
T
ln
K_001_LCC
q_S001_LCC
+
z_ff2
F
V_mem
Af_f2_100
=
R
T
ln
K_100_LCC
q_S100_LCC
+
z_ff2
F
V_mem
Af_f2_101
=
R
T
ln
K_101_LCC
q_S101_LCC
+
z_ff2
F
V_mem
Af_f3_010
=
R
T
ln
K_010_LCC
q_S010_LCC
+
z_ff3
F
V_mem
Af_f3_011
=
R
T
ln
K_011_LCC
q_S011_LCC
+
z_ff3
F
V_mem
Af_f3_110
=
R
T
ln
K_110_LCC
q_S110_LCC
+
z_ff3
F
V_mem
Af_f3_111
=
R
T
ln
K_111_LCC
q_S111_LCC
+
z_ff3
F
V_mem
Af_fCa00
=
mu_S000_LCC
Af_fCa01
=
mu_S010_LCC
Af_fCa02
=
mu_S020_LCC
Af_fCa10
=
mu_S100_LCC
Af_fCa11
=
mu_S110_LCC
Af_fCa12
=
mu_S120_LCC
Am_LCC_Ca1
=
zCa
F
V_mem
Am_LCC_Ca2
=
zCa
F
V_mem
Am_LCC_K1
=
zK
F
V_mem
Am_LCC_K2
=
zK
F
V_mem
Ar_LCC_Ca1
=
mu_Ca_o
+
mu_S111_LCC
Ar_LCC_Ca2
=
mu_Ca_o
+
mu_S121_LCC
Ar_LCC_K1
=
mu_K_o
+
mu_S111_LCC
Ar_LCC_K2
=
mu_K_o
+
mu_S121_LCC
Ar_d000
=
R
T
ln
K_100_LCC
q_S100_LCC
+
z_rd
F
V_mem
Ar_d001
=
R
T
ln
K_101_LCC
q_S101_LCC
+
z_rd
F
V_mem
Ar_d010
=
R
T
ln
K_110_LCC
q_S110_LCC
+
z_rd
F
V_mem
Ar_d011
=
R
T
ln
K_111_LCC
q_S111_LCC
+
z_rd
F
V_mem
Ar_d020
=
R
T
ln
K_120_LCC
q_S120_LCC
+
z_rd
F
V_mem
Ar_d021
=
R
T
ln
K_121_LCC
q_S121_LCC
+
z_rd
F
V_mem
Ar_f1_000
=
R
T
ln
K_010_LCC
q_S010_LCC
+
z_rf1
F
V_mem
Ar_f1_001
=
R
T
ln
K_011_LCC
q_S011_LCC
+
z_rf1
F
V_mem
Ar_f1_100
=
R
T
ln
K_110_LCC
q_S110_LCC
+
z_rf1
F
V_mem
Ar_f1_101
=
R
T
ln
K_111_LCC
q_S111_LCC
+
z_rf1
F
V_mem
Ar_f2_000
=
R
T
ln
K_020_LCC
q_S020_LCC
+
z_rf2
F
V_mem
Ar_f2_001
=
R
T
ln
K_021_LCC
q_S021_LCC
+
z_rf2
F
V_mem
Ar_f2_100
=
R
T
ln
K_120_LCC
q_S120_LCC
+
z_rf2
F
V_mem
Ar_f2_101
=
R
T
ln
K_121_LCC
q_S121_LCC
+
z_rf2
F
V_mem
Ar_f3_010
=
R
T
ln
K_020_LCC
q_S020_LCC
+
z_rf3
F
V_mem
Ar_f3_011
=
R
T
ln
K_021_LCC
q_S021_LCC
+
z_rf3
F
V_mem
Ar_f3_110
=
R
T
ln
K_120_LCC
q_S120_LCC
+
z_rf3
F
V_mem
Ar_f3_111
=
R
T
ln
K_121_LCC
q_S121_LCC
+
z_rf3
F
V_mem
Ar_fCa00
=
R
T
ln
K_001_LCC
q_S001_LCC
+
z_rCa
mu_Ca_i
Ar_fCa01
=
R
T
ln
K_011_LCC
q_S011_LCC
+
z_rCa
mu_Ca_i
Ar_fCa02
=
R
T
ln
K_021_LCC
q_S021_LCC
+
z_rCa
mu_Ca_i
Ar_fCa10
=
R
T
ln
K_101_LCC
q_S101_LCC
+
z_rCa
mu_Ca_i
Ar_fCa11
=
R
T
ln
K_111_LCC
q_S111_LCC
+
z_rCa
mu_Ca_i
Ar_fCa12
=
R
T
ln
K_121_LCC
q_S121_LCC
+
z_rCa
mu_Ca_i
I_mem_LCC
=
F
z_rf2
v_f2_001
-
z_ff2
v_f2_001
+
z_rf3
v_f3_011
-
z_ff3
v_f3_011
+
z_rf1
v_f1_101
-
z_ff1
v_f1_101
+
z_rf2
v_f2_101
-
z_ff2
v_f2_101
+
z_rf3
v_f3_111
-
z_ff3
v_f3_111
+
z_rf1
v_f1_001
-
z_ff1
v_f1_001
+
z_rd
v_d021
-
z_fd
v_d021
+
z_rd
v_d011
-
z_fd
v_d011
+
z_rd
v_d001
-
z_fd
v_d001
+
z_rf3
v_f3_110
-
z_ff3
v_f3_110
+
z_rf2
v_f2_100
-
z_ff2
v_f2_100
+
z_rf1
v_f1_100
-
z_ff1
v_f1_100
+
z_rf3
v_f3_010
-
z_ff3
v_f3_010
+
z_rf2
v_f2_000
-
z_ff2
v_f2_000
+
z_rf1
v_f1_000
-
z_ff1
v_f1_000
+
z_rd
v_d020
-
z_fd
v_d020
+
z_rd
v_d010
-
z_fd
v_d010
+
z_rd
v_d000
-
z_fd
v_d000
-
zCa
v_LCC_Ca1
+
zCa
v_LCC_Ca2
-
zK
v_LCC_K1
+
zK
v_LCC_K2
v_Ca_o_LCC
=
v_LCC_Ca2
+
v_LCC_Ca1
v_Ca_i_LCC
=
+
z_rCa
v_fCa10
+
z_rCa
v_fCa11
+
z_rCa
v_fCa02
+
z_rCa
v_fCa01
+
z_rCa
v_fCa00
+
z_rCa
v_fCa12
-
v_LCC_Ca1
-
v_LCC_Ca2
v_K_o_LCC
=
v_LCC_K2
+
v_LCC_K1
v_K_i_LCC
=
-
v_LCC_K1
-
v_LCC_K2
v_S000_LCC
=
-
v_d000
-
v_f1_000
-
v_f2_000
-
v_fCa00
v_S001_LCC
=
-
v_d001
-
v_f1_001
-
v_f2_001
-
-
v_fCa00
v_S010_LCC
=
-
v_d010
+
v_f1_000
-
v_fCa01
-
v_f3_010
v_S011_LCC
=
-
v_d011
+
v_f1_001
-
-
v_fCa01
-
v_f3_011
v_S020_LCC
=
-
v_d020
+
v_f2_000
-
v_fCa02
+
v_f3_010
v_S021_LCC
=
-
v_d021
+
v_f2_001
-
-
v_fCa02
+
v_f3_011
v_S100_LCC
=
-
v_f2_100
+
v_d000
-
v_f1_100
-
v_fCa10
v_S101_LCC
=
-
v_f2_101
+
v_d001
-
v_f1_101
-
-
v_fCa10
v_S110_LCC
=
v_f1_100
+
v_d010
-
v_fCa11
-
v_f3_110
v_S111_LCC
=
v_f1_101
+
v_d011
-
-
v_fCa11
+
v_LCC_Ca1
-
v_LCC_Ca1
+
v_LCC_K1
-
v_LCC_K1
-
v_f3_111
v_S120_LCC
=
v_f2_100
+
v_d020
-
v_fCa12
+
v_f3_110
v_S121_LCC
=
v_f2_101
+
v_d021
-
-
v_fCa12
+
v_LCC_Ca2
-
v_LCC_Ca2
+
v_LCC_K2
-
v_LCC_K2
+
v_f3_111
d
d
t
q_S000_LCC
=
v_S000_LCC
d
d
t
q_S010_LCC
=
v_S010_LCC
d
d
t
q_S020_LCC
=
v_S020_LCC
d
d
t
q_S100_LCC
=
v_S100_LCC
d
d
t
q_S110_LCC
=
v_S110_LCC
d
d
t
q_S120_LCC
=
v_S120_LCC
d
d
t
q_S001_LCC
=
v_S001_LCC
d
d
t
q_S011_LCC
=
v_S011_LCC
d
d
t
q_S021_LCC
=
v_S021_LCC
d
d
t
q_S101_LCC
=
v_S101_LCC
d
d
t
q_S111_LCC
=
v_S111_LCC
d
d
t
q_S121_LCC
=
v_S121_LCC
v_LCC_Ca1
=
kappa_LCC_Ca1
ⅇ
Af_LCC_Ca1
R
T
-
ⅇ
Ar_LCC_Ca1
R
T
if
Am_LCC_Ca1
=
0
kappa_LCC_Ca1
Am_LCC_Ca1
R
T
ⅇ
Am_LCC_Ca1
R
T
-
1
ⅇ
Af_LCC_Ca1
R
T
-
ⅇ
Ar_LCC_Ca1
R
T
otherwise
v_LCC_Ca2
=
kappa_LCC_Ca2
ⅇ
Af_LCC_Ca2
R
T
-
ⅇ
Ar_LCC_Ca2
R
T
if
Am_LCC_Ca2
=
0
kappa_LCC_Ca2
Am_LCC_Ca2
R
T
ⅇ
Am_LCC_Ca2
R
T
-
1
ⅇ
Af_LCC_Ca2
R
T
-
ⅇ
Ar_LCC_Ca2
R
T
otherwise
v_LCC_K1
=
kappa_LCC_K1
ⅇ
Af_LCC_K1
R
T
-
ⅇ
Ar_LCC_K1
R
T
if
Am_LCC_K1
=
0
kappa_LCC_K1
Am_LCC_K1
R
T
ⅇ
Am_LCC_K1
R
T
-
1
ⅇ
Af_LCC_K1
R
T
-
ⅇ
Ar_LCC_K1
R
T
otherwise
v_LCC_K2
=
kappa_LCC_K2
ⅇ
Af_LCC_K2
R
T
-
ⅇ
Ar_LCC_K2
R
T
if
Am_LCC_K2
=
0
kappa_LCC_K2
Am_LCC_K2
R
T
ⅇ
Am_LCC_K2
R
T
-
1
ⅇ
Af_LCC_K2
R
T
-
ⅇ
Ar_LCC_K2
R
T
otherwise
Ca_tot
=
q_Ca_o
+
q_Ca_i
+
q_S001_LCC
+
q_S011_LCC
+
q_S021_LCC
+
q_S101_LCC
+
q_S111_LCC
+
q_S121_LCC
Component: units
Component: constants
Source
Derived from workspace
CaL protein knowledge page
at changeset
1b05ba584d36
.
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