Date Author Log Options Exposure
2011-05-09 David Nickerson trying to work out why this page doesn't render correctly in PMR2 [files] [tgz] [zip] Collier et al (1996) Delta-Notch model
2011-05-09 David Nickerson adding an initial description of this model and associated diagrams. [files] [tgz] [zip]
2011-05-09 David Nickerson using CellML2Dot revealed that I had missed the public_interface attribute required on the initial value variables [files] [tgz] [zip]
2011-05-04 David Nickerson adding explicit representation of the boundary conditions [files] [tgz] [zip]
2011-05-04 David Nickerson updating to an initial attempt at modularising this model. Have now defined a single model representing the single cell equations and then a second model which represents the two cell variant of the Collier et al (1996). the 2cell model imports the single cell model twice and defines the appropriate neighbourhood average values to pass into each of the single cell instances. The figure is the same as before, but regenerated from the new version of the model. [files] [tgz] [zip]
2011-04-29 David Nickerson adding an initial encoding of the Collier et al (1996) Delta-Notch model. This version is for two cells in a 1-dimensional line with zero boundary conditions. The model reproduces Figure 3 from the Collier paper, as shown in collier.png. This is a brute force approach to get an initial encoding of the model, paying no heed to best practices or model reuse. Hopefully this gives a starting point to generalise following best practices guidelines for model reuse and modularity in order to create a more useful version of the model equations. [files] [tgz] [zip]