Shortlog

Date Author Log Options Exposure
2015-05-25 David Nickerson adding a SED-ML document which does nested repeated tasks to iterate over clamp potential and temperature; doesn't work with get-sed-ml-client [files] [tgz] [zip]
2015-05-24 David Nickerson adding a repeated task to step through multiple clamp potentials [files] [tgz] [zip]
2015-05-24 David Nickerson getting a new verison of the voltage clamp model up and running with SED-ML in preparation of further work [files] [tgz] [zip]
2015-05-24 David Nickerson adding missing CellML namespace to allow XPath expressions to be resolved; change to using local CellML model rather than the one from the repository; adding a report output as that is the only kind of output currently supported by get-sed-ml-client [files] [tgz] [zip]
2014-09-04 David Nickerson adding a version of the periodic stimulus model for testing out some other code [files] [tgz] [zip]
2014-08-19 David Nickerson change one of the parameters to a mathematical equation for use in developing model compaction [files] [tgz] [zip]
2014-08-13 David Nickerson missing a couple of units imports [files] [tgz] [zip]
2014-08-13 David Nickerson adding gating variables to the model interface [files] [tgz] [zip]
2014-05-20 David Nickerson exposing some key model parameters and some more outputs for use in testing variable control externally to the model [files] [tgz] [zip]
2012-09-26 David Nickerson fixing up references to the tutorial to match what the exposure on the live site wants to used. [files] [tgz] [zip] Andre's Hodgkin & Huxley with CellML
2012-09-26 David Nickerson fixing up references to the tutorial to match what the exposure wants to used. [files] [tgz] [zip]
2012-09-26 David Nickerson adding more information to the main documentation page for the workspace, including some useful direct links to various documents. [files] [tgz] [zip]
2012-09-26 David Nickerson renaming the tutorial web page to work around a bug in making PMR2 exposures with files named index.html [files] [tgz] [zip]
2012-09-26 David Nickerson adding a bit more to the tutorial regarding instantiation in a simulation experiment. Adding a basic SED-ML for the action potential simulation and images of the results calculated using the SED-ML web tools. [files] [tgz] [zip]
2012-09-25 David Nickerson adding a top-level HTML index page to use with the exposure [files] [tgz] [zip]
2012-09-25 David Nickerson updates with more information from the presentation [files] [tgz] [zip]
2012-09-25 David Nickerson starting to add a bit of documentation following the slides I put together for the VPH-MIP standardisation and ontologies module. [files] [tgz] [zip]
2012-09-24 David Nickerson moving all metadata to external files to clean up the CellML code for tutorial purposes. Using my new rdfExtrator tool to do the work. [files] [tgz] [zip]
2012-08-28 David Nickerson replacing CellML simulation metadata with CSim summary description; bubbling up membrane currents and potential to allow output/referencing via SED-ML. [files] [tgz] [zip]
2010-08-26 David Nickerson adding initial copy of related CellML models and supporting data from my HH reference description example (see: http://www.bioeng.nus.edu.sg/compbiolab/p3/) [files] [tgz] [zip]