- Author:
- Matthias K?nig <matthias.koenig@charite.de>
- Date:
- 2013-04-09 15:08:59+02:00
- Desc:
- Documentation of Reaction Mechanism.
Images for basic mechanisms created.
- Permanent Source URI:
- https://models.cellml.org/w/matthiaskoenig/MetabolicComponentLibrary/rawfile/af10084679bb928d763a8ff441ed93d41aa59126/library/HyperbolicModifierIrrev.cellml
<?xml version="1.0" encoding="utf-8"?>
<!--
This CellML file was generated on 3/25/2013 at 12:20:03 at AM using:
COR (0.9.31.1409)
Copyright 2002-2013 Dr Alan Garny
http://cor.physiol.ox.ac.uk/ - cor@physiol.ox.ac.uk
Metabolic Component Library for CellML
Matthias Koenig (matthias.koenig@charite.de)
-->
<model name="HyperbolicModifierIrrev" cmeta:id="HyperbolicModifierIrrev" xmlns="http://www.cellml.org/cellml/1.1#" xmlns:cellml="http://www.cellml.org/cellml/1.1#" xmlns:cmeta="http://www.cellml.org/metadata/1.1#">
<units name="mM">
<unit units="mole" prefix="milli"/>
<unit units="liter" exponent="-1"/>
</units>
<units name="per_second">
<unit units="second" exponent="-1"/>
</units>
<units name="mM_per_second">
<unit units="mM"/>
<unit units="second" exponent="-1"/>
</units>
<component name="Test">
<variable name="t" units="second"/>
<variable name="J" units="mM_per_second" public_interface="in"/>
<variable name="S" units="mM" initial_value="1" public_interface="out"/>
<variable name="P" units="mM" initial_value="0"/>
<variable name="M" units="mM" public_interface="out"/>
<variable name="V" units="mM_per_second" public_interface="out"/>
<variable name="Kd" units="mM" public_interface="out"/>
<variable name="Km_S" units="mM" public_interface="out"/>
<variable name="a" units="dimensionless" public_interface="out"/>
<variable name="b" units="dimensionless" public_interface="out"/>
<math xmlns="http://www.w3.org/1998/Math/MathML">
<apply>
<eq/>
<ci>M</ci>
<cn cellml:units="mM">0.5</cn>
</apply>
<apply>
<eq/>
<ci>V</ci>
<cn cellml:units="mM_per_second">10</cn>
</apply>
<apply>
<eq/>
<ci>Kd</ci>
<cn cellml:units="mM">0.1</cn>
</apply>
<apply>
<eq/>
<ci>Km_S</ci>
<cn cellml:units="mM">0.3</cn>
</apply>
<apply>
<eq/>
<ci>a</ci>
<cn cellml:units="dimensionless">0.2</cn>
</apply>
<apply>
<eq/>
<ci>b</ci>
<cn cellml:units="dimensionless">0.2</cn>
</apply>
<apply>
<eq/>
<apply>
<diff/>
<bvar>
<ci>t</ci>
</bvar>
<ci>S</ci>
</apply>
<apply>
<minus/>
<ci>J</ci>
</apply>
</apply>
<apply>
<eq/>
<apply>
<diff/>
<bvar>
<ci>t</ci>
</bvar>
<ci>P</ci>
</apply>
<ci>J</ci>
</apply>
</math>
</component>
<component name="HyperbolicModifierIrrev">
<variable name="J" units="mM_per_second" public_interface="out"/>
<variable name="S" units="mM" public_interface="in"/>
<variable name="M" units="mM" public_interface="in"/>
<variable name="V" units="mM_per_second" public_interface="in"/>
<variable name="Kd" units="mM" public_interface="in"/>
<variable name="Km_S" units="mM" public_interface="in"/>
<variable name="a" units="dimensionless" public_interface="in"/>
<variable name="b" units="dimensionless" public_interface="in"/>
<math xmlns="http://www.w3.org/1998/Math/MathML">
<apply>
<eq/>
<ci>J</ci>
<apply>
<divide/>
<apply>
<times/>
<ci>V</ci>
<ci>S</ci>
<apply>
<plus/>
<cn cellml:units="dimensionless">1</cn>
<apply>
<divide/>
<apply>
<times/>
<ci>b</ci>
<ci>M</ci>
</apply>
<apply>
<times/>
<ci>a</ci>
<ci>Kd</ci>
</apply>
</apply>
</apply>
</apply>
<apply>
<plus/>
<apply>
<times/>
<ci>Km_S</ci>
<apply>
<plus/>
<cn cellml:units="dimensionless">1</cn>
<apply>
<divide/>
<ci>M</ci>
<ci>Kd</ci>
</apply>
</apply>
</apply>
<apply>
<times/>
<ci>S</ci>
<apply>
<plus/>
<cn cellml:units="dimensionless">1</cn>
<apply>
<divide/>
<ci>M</ci>
<apply>
<times/>
<ci>a</ci>
<ci>Kd</ci>
</apply>
</apply>
</apply>
</apply>
</apply>
</apply>
</apply>
</math>
</component>
<connection>
<map_components component_1="Test" component_2="HyperbolicModifierIrrev"/>
<map_variables variable_1="J" variable_2="J"/>
<map_variables variable_1="S" variable_2="S"/>
<map_variables variable_1="M" variable_2="M"/>
<map_variables variable_1="V" variable_2="V"/>
<map_variables variable_1="Kd" variable_2="Kd"/>
<map_variables variable_1="Km_S" variable_2="Km_S"/>
<map_variables variable_1="a" variable_2="a"/>
<map_variables variable_1="b" variable_2="b"/>
</connection>
</model>