# Calcium Dynamics

- Albrecht, Colegrove, Friel, 2002
- Differential Regulation of ER Ca2+ Uptake and Release Rates Accounts for Multiple Modes of Ca2+-induced Ca2+ Release
- Albrecht, Colegrove, Hongpaisan, Pivovarova, Andrews, Friel, 2001
- Multiple Modes of Calcium-induced Calcium Release in Sympathetic Neurons I: Attenuation of Endoplasmic Reticulum Ca2+ Accumulation at Low [Ca2+]i during Weak Depolarisation
- Baylor, Hollingworth, Chandler, 2002
- Comparison of Simulated and Measured Calcium Sparks in Intact Skeletal Muscle Fibers of the Frog (Reaction A)
- Baylor, Hollingworth, Chandler, 2002
- Comparison of Simulated and Measured Calcium Sparks in Intact Skeletal Muscle Fibers of the Frog (Reaction B)
- Baylor, Hollingworth, Chandler, 2002
- Comparison of Simulated and Measured Calcium Sparks in Intact Skeletal Muscle Fibers of the Frog (Reaction C)
- Baylor, Hollingworth, Chandler, 2002
- Comparison of Simulated and Measured Calcium Sparks in Intact Skeletal Muscle Fibers of the Frog (Reaction D)
- Baylor, Hollingworth, Chandler, 2002
- Comparison of Simulated and Measured Calcium Sparks in Intact Skeletal Muscle Fibers of the Frog (Reaction E)
- Baylor, Hollingworth, Chandler, 2002
- Comparison of Simulated and Measured Calcium Sparks in Intact Skeletal Muscle Fibers of the Frog (Reaction F)
- Bertram, Previte, Sherman, Kinard, Satin, 2000
- The Phantom Burster Model for Pancreatic Beta Cells (fast bursting model)
- Bertram, Previte, Sherman, Kinard, Satin, 2000
- The Phantom Burster Model for Pancreatic Beta Cells (medium bursting model)
- Bertram, Previte, Sherman, Kinard, Satin, 2000
- The Phantom Burster Model for Pancreatic Beta Cells (slow bursting model)
- Bertram, Satin, Zhang, Smolen, Sherman, 2004
- Calcium and Glycolysis Mediate Multiple Bursting Modes in Pancreatic Islets (glycolytic bursting model)
- Bertram, Satin, Zhang, Smolen, Sherman, 2004
- Calcium and Glycolysis Mediate Multiple Bursting Modes in Pancreatic Islets (compound bursting model)
- Bertram, Sherman, 2004
- A Calcium-based Phantom Bursting Model for Pancreatic Islets
- Bindschadler, Sneyd, 2001
- A Bifurcation Analysis of Two Coupled Calcium Oscillators
- Bondarenko, Szigeti, Bett, Kim, Rasmusson, 2004
- Computer model of action potential of mouse ventricular myocytes (Apical Cell Description)
- Bondarenko, Szigeti, Bett, Kim, Rasmusson, 2004
- Computer model of action potential of mouse ventricular myocytes (Septal Cell Description)
- Borghans, Dupont, Goldbeter, 1997
- Complex intracellular calcium oscillations. A theoretical exploration of possible mechanisms (Model A)
- Borghans, Dupont, Goldbeter, 1997
- Complex intracellular calcium oscillations. A theoretical exploration of possible mechanisms (Model B)
- Borghans, Dupont, Goldbeter, 1997
- Complex intracellular calcium oscillations. A theoretical exploration of possible mechanisms (Model C)
- Boyett, Zhang, Garny, Holden, 2001
- Control of the pacemaker activity of the sinoatrial node by intracellular Ca2+. Experiments and modelling
- Chay, 1997
- Effects of extracellular calcium on electrical bursting and intracellular and luminal calcium oscillations in insulin secreting pancreatic beta-cells
- Chay, Lee, Fan, 1995
- Appearance of Phase-locked Wenchbach-like Rhythms, Devil's Staircase and Universality in Intracellular Calcium Spikes in Non-excitable Cell Models
- Colegrove, Albrecht, Friel, 2000
- Quantitive Analysis of Mitochondrial Ca2+ Uptake and Release Pathways in Sympathetic Neurons Reconstruction of the Recovery after Depolarisation-evoked [Ca2+] Elevations
- Cooling, Hunter, Crampin, 2009
- Sensitivity of NFAT Cycling to Cytosolic Calcium Concentration: Implications for Hypertrophic Signals in Cardiac Myocytes (Shen-derived calcium protocol)
- Cooling, Hunter, Crampin, 2009
- Sensitivity of NFAT Cycling to Cytosolic Calcium Concentration: Implications for Hypertrophic Signals in Cardiac Myocytes (Dual Calcium Protocol)
- Cooling, Hunter, Crampin, 2009
- Sensitivity of NFAT Cycling to Cytosolic Calcium Concentration: Implications for Hypertrophic Signals in Cardiac Myocytes (Tomida-derived calcium protocol)
- Cortassa, Aon, Marban, Winslow, O'Rourke, 2003
- An Integrated Model of Cardiac Mitrochondrial Energy Metabolism and Calcium Dynamics
- Cui, Kaandorp, 2006
- Mathematical modeling of calcium homeostasis in yeast cells
- Dawson, Lea, Irvine, 2003
- Kinetic model of the inositol trisphosphate receptor that shows both steady-state and quantal patterns of Ca2+ release from intracellular stores
- De Vries, Sherman, 2000
- Channel Sharing in Pancreatic Beta-Cells Revisited: Enhancement of Emergent Bursting by Noise
- De Vries, Sherman, 2001
- From Spikers to Bursters Via Coupling: Help from Heterogeneity
- De Young, Keizer, 1992
- A single-pool inositol 1,4,5-triphosphate-receptor-based model for agonist-stimulated oscillations in Ca 2+ concentration
- Dougherty, Wright, Yew, 2005
- Computational model of the cAMP-mediated sensory response and calcium-dependent adaptation in vertebrate olfactory receptor neurons
- Dupont, Berridge, Goldbetter, 1991
- Signal-induced Ca2+ oscillations: Properties of a model based on (Ca2+)-induced Ca2+ release (Model A)
- Dupont, Berridge, Goldbetter, 1991
- Signal-induced Ca2+ oscillations: Properties of a model based on (Ca2+)-induced Ca2+ release (Model B)
- Dupont, Goldbeter, 1992
- Protein phosphorylation driven by intracellular calcium oscillations: A kinetic analysis (Model A)
- Dupont, Goldbeter, 1992
- Protein phosphorylation driven by intracellular calcium oscillations: A kinetic analysis (Model B)
- Fall, Keizer, 2001
- Mitochondrial Modulation of Intracellular Ca2+ Signalling
- Fink, Slepchenko, Loew, 1999
- Determination of time-dependent inositol-1,4,5-triphosphate concentrations during calcium release in a smooth muscle cell
- Fink, Slepchenko, Moraru, Watras, Schaff, Loew, 2000
- An image-based model of calcium waves in differentiated neuroblastoma cells
- Fridlyand, Tamarina, Philipson, 2003
- Modeling of Ca2+ flux in pancreatic beta-cells: role of the plasma membrane and intracellular stores
- Friel, 1995
- [Ca2+]i oscillations in sympathetic neurons: an experimental test of a theoretical model
- Gall, Susa, 1999
- Effect of Na/Ca Exchange on Plateau Fraction and [Ca]i in Models for Bursting in Pancreatic Beta-Cells (Model A)
- Gall, Susa, 1999
- Effect of Na/Ca Exchange on Plateau Fraction and [Ca]i in Models for Bursting in Pancreatic Beta-Cells (Model B)
- Gall, Susa, 1999
- Effect of Na/Ca Exchange on Plateau Fraction and [Ca]i in Models for Bursting in Pancreatic Beta-Cells (Model C)
- Goforth, Bertram, Khan, Zhang, Sherman, Satin, 2002
- Calcium-activated K+ Channels of Mouse Beta Cells are Controlled by Both Store and Cytoplasmic Ca2+: Experimental and Theoretical Studies
- Goldbeter, Dupont, Berridge, 1990
- Minimal model for signal-induced Ca2+ oscillations and for their frequency encoding through protein phosphorylation
- Hilgemann, Noble, 1987
- Excitation-contraction coupling and extracellular calcium transients in rabbit atrium: reconstruction of basic cellular mechanisms
- Hinch, Greenstein, Tanskanen, Xu, Winslow, 2004
- A Simplified Local Control Model of Calcium-Induced Calcium Release in Cardiac Ventricular Myocytes
- Houart, Dupont, Albert, 1999
- Bursting, Chaos and birhythmicity Originating from Self-modulation of the Inositol 1,4,5-triphosphate Signal in a Model for Intracellular Ca2+ Oscillations
- Iribe, Kohl, Noble, 2006
- Modulatory effect of calmodulin-dependent kinase II (CaMKII) on sarcoplasmic reticulum Ca2+ handling and interval-force relations: a modelling study.
- Iyer, Mazhari, Winslow, 2004
- A computational model of the human left-ventricular epicardial myocyte
- Izakov, Katsnelson, Blyakhman, Markhasin, Shkylar, 1991
- Cooperative Effects Due to Calcium Binding by Troponin and Their Consequences for Contraction and Relaxation of Cardiac Muscle Under Various Conditions of Mechanical Loading
- Jafri, Rice, Winslow, 1998
- Cardiac Ca2+ Dynamics: The Roles of Ryanodine Receptor Adaptation and Sarcoplasmic Reticulum Load
- Jafri, Rice, Winslow, 1998
- Cardiac Ca2+ Dynamics: The Roles of Ryanodine Receptor Adaptation and Sarcoplasmic Reticulum Load (Extended Model)
- Katsnelson, Nikitina, Chemla, Solovyova, Coirault, Lecarpentier, Markhasin, 2004
- Time is expressed in milliseconds, calcium variables and parameters are normalised to total TnC concentration.
- Katsnelson, Nikitina, Chemla, Solovyova, Coirault, Lecarpentier, Markhasin, 2004
- Time is expressed in seconds, calcium variables and parameters are expressed in absolute values.
- Katsnelson, Nikitina, Chemla, Solovyova, Coirault, Lecarpentier, Markhasin, 2004
- Time is expressed in seconds, calcium variables and parameters are normalised to total TnC concentration.
- Keener, 2001
- Diffusion Induced Oscillatory Insulin Secretion
- Keizer, Levine, 1996
- Ryanodine Receptor Adaptation and Ca2+-Induced Ca2+ Release-Dependent Ca2+ Oscillations
- Landesberg, Sideman, 1994
- Mechanical regulation of cardiac muscle by coupling calcium kinetics with cross-bridge cycling: a dynamic model
- LeBeau, Yule, Groblewski, Sneyd, 1999
- Agonist-dependent Phosphorylation of the Inositol 1,4,5-Triphosphate Receptor
- Lemon, Gibson, Bennett, 2003
- Metabotropic receptor activation, desensitization and sequestration-I: modelling calcium and inositol 1,4,5-trisphosphate dynamics following receptor activation
- Li, Rinzel, 1994
- Equations for InsP3 Receptor-mediated [Ca2+]i Oscillations Derived from a Detailed Kinetic Model: A Hodgkin-Huxley Like Formalism
- Magnus, Keizer, 1997
- Minimal Model of beta-cell mitochondrial Ca2+ handling
- Magnus, Keizer, 1998
- Model of beta_cell mitochondrial calcium handling and electrical activity. I. Cytoplasmic variables
- Marhl, Haberichter, Brumen, Heinrich, 2000
- Complex calcium oscillations and the role of mitochondria and cytosolic proteins
- Marhl, Schuster, Brumen, Heinrich, 1997
- Modelling the interrelations between calcium oscillations and ER membrane potential oscillations
- McKenzie, Sneyd, 1998
- On the Formation and Breakup of Spiral Waves of Calcium
- Mears, Sheppard, Atwater, Rojas, Bertram, Sherman, 1997
- Evidence That Calcium Release-activated Current Mediates the Biphasic Electrical Activity of Mouse Pancreatic Beta-Cells
- Michailova, McCulloch, 2001
- Model study of ATP and ADP buffering, transport of Ca2+ and Mg2+, and regulation of ion pumps in ventricular myocyte
- Michailova, Saucerman, Belik, McCulloch, 2005
- Modeling regulation of cardiac KATP and L-type Ca2+ currents by ATP, ADP, and Mg2+
- Mosekilde, Lading, Yanchuk, Maistrenko, 2001
- Bifurcation structure of a model of bursting pancreatic cells
- Nagerl, Novo, Mody, Vergara, 2000
- Binding Kinetics of Calbindin-D28k Determined by Flash Photolysis of Caged Ca2+
- Noble, Noble, 2001
- Remodelling of Calcium Dynamics in Guinea-Pig Ventricular Cells
- Noble, Varghese, Kohl, Noble, 1998
- Improved guinea-pig ventricular cell model incorporating a diadic space, IKr and IKs, and length- and tension-dependent processes (Extended Model)
- Noble, Varghese, Kohl, Noble, 1998
- Improved guinea-pig ventricular cell model incorporating a diadic space, IKr and IKs, and length- and tension-dependent processes (Stretch Model)
- Plant, 1981
- Bifurcation and resonance in a model for bursting nerve cells
- Puglisi, Bers, 2001
- LabHEART: an interactive computer model of rabbit ventricular myocyte ion channels and Ca transport
- Purvis, Butera, 2005
- Ionic Current Model of a Hypoglossal Motoneuron
- Raposo, Sobrinho, Ferreira, 2002
- A minimal mathematical model of calcium homeostasis
- Rice, Jafri, Winslow, 2000
- Modeling short-term interval-force relations in cardiac muscle
- Rice, Winslow, Jafri, 1999
- Modeling Gain and Gradedness of Ca2+ Release in the Functional Unit of the Cardiac Diadic Space
- Riemer, Sobie, Tung, 1998
- Stretch-induced changes in arrhythmogenesis and excitability in experimentally based heart cell models
- Sachse, Glanzel, Seemann, 2003
- Modeling of Protein Interactions Involved in Cardiac Tension Development
- Saftenku, Williams, Sitsapesan, 2001
- Markovian Models of Low and High Activity Levals of Cardiac Ryanodine Receptors (H1 Model)
- Saftenku, Williams, Sitsapesan, 2001
- Markovian Models of Low and High Activity Levals of Cardiac Ryanodine Receptors (H2 Model)
- Saftenku, Williams, Sitsapesan, 2001
- Markovian Models of Low and High Activity Levals of Cardiac Ryanodine Receptors (Low Model)
- Saucerman, Bers, 2008
- Calmodulin Mediates Differential Sensitivity of CAMKII and Calcineurin to Local Ca2+ in Cardiac Myocytes
- Shannon, Wang, Puglisi, Weber, Bers, 2004
- Modified version of the model which runs to recreate the published results.
- Shannon, Wang, Puglisi, Weber, Bers, 2004
- The original version of the model, true to the published set of equations, replete with typographical errors contained in the publication.
- Shiferaw, Watanabe, Garfinkel, Weiss, Karma, 2003
- Model of Intracellular Calcium Cycling in Ventricular Myocytes
- Shorten, Robson, McKinnon, Wall, 2000
- CRH-induced Electrical Activity and Calcium Signalling in Pituitary Corticotrophs
- Shorten, Wall, 2000
- A Hodgkin-Huxley Model Exhibiting Bursting Oscillations
- Sneyd, Dufour, 2002
- A dynamic model of the type-2 inositol triphosphate receptor
- Sneyd, Tsaneva-Atanasova, Bruce, Straub, Giovannucci, Yule, 2003
- A Model of Calcium Waves in Pancreatic and Parotid Acinar Cells
- Sneyd, Tsaneva-Atanasova, Yule, Thompson, Shuttleworth, 2004
- Sneyd et al.'s 2004 mathematical model for Ca2+ oscillations and their control by membrane fluxes.
- Sneyd, Wetton, Charles, Sanderson, 1995
- Intercellular calcium waves mediated by diffusion of inositol trisphosphate: a two-dimensional model
- Snyder, Palmer, Moore, 2000
- A Mathematical Model of Cardiocyte Ca2+ Dynamics with a Novel Representation of Sarcoplasmic Reticular Ca2+ Control
- Sobie, Dilly, dos Santos Cruz, Lederer, Jafri, 2002
- Termination of Cardiac Ca2+ Sparks: An Investigative Mathematical Model of Calcium-Induced Calcium Release
- Stern, Song, Sham, Yang, Boheler, Rios, 1999
- Local Control Models of Cardiac Excitation-Contraction Coupling A Possible Role for Allosteric Interactions between Ryanodine Receptors
- Tomida, Hirose, Takizawa, Shibasaki, Iino, 2003
- NFAT functions as a working memory of Ca2+ signals in decoding Ca2+ oscillation
- Topp, Promislow, de Vries, Miura, Finegood, 2000
- A Model of Beta-Cell Mass, Insulin, and Glucose Kinetics: Paythways to Diabetes
- Tran, Smith, Loiselle, Crampin, 2009
- A Thermodynamic Model of the Cardiac Sarcoplasmic/Endoplasmic Ca(2+) (SERCA) Pump: the three-state SERCA model
- Tran, Smith, Loiselle, Crampin, 2009
- A Thermodynamic Model of the Cardiac Sarcoplasmic/Endoplasmic Ca(2+) (SERCA) Pump: the two-state SERCA model
- Van Goor, LeBeau, Krsmanovic, Sherman, Catt, Stojilkovic, 2000
- Amplitude-Dependent Spike-Broadening and Enhanced Ca2+ Signaling in GnRH-Secreting Neurons
- Viswanathan, Shaw, Rudy, 1999
- Effects of IKr and IKs heterogeneity on action potential duration and its rate dependence: a simulation study (Midmyocardial Cell Model)
- Viswanathan, Shaw, Rudy, 1999
- Effects of IKr and IKs heterogeneity on action potential duration and its rate dependence: a simulation study (Endocardial Cell Model)
- Viswanathan, Shaw, Rudy, 1999
- Effects of IKr and IKs heterogeneity on action potential duration and its rate dependence: a simulation study (Epicardial Cell Model)
- Wang, Huang, Huang, 2006
- A quantitative kinetic model for ATP-induced intracellular Ca2+ oscillations
- Wang, Sobie, 2008
- Mathematical model of the neonatal mouse ventricular action potential
- Warren, Tawhai, Crampin, 2010
- Mathematical modelling of calcium wave propagation in mammalian airway epithelium: evidence for regenerative ATP release
- Wierschem, Bertram,
- Complex bursting in pancreatic islets: a potential glycolytic mechanism
- Wilkins, Sneyd, 1998
- Intercellular Spiral Waves of Calcium
- Winograd, Destexhe, Sanchez-Vives, 2008
- Hyperpolarization-activated graded persistent activity in the prefrontal cortex
- Winslow, Rice, Jafri, Marban, O'Rorke, 1999
- Mechanisms of Altered Excitation-Contraction Coupling in Canine Tachycardia-Induced Heart Failure, II Model Studies
- Winslow, Rice, Jafri, Marban, O'Rorke, 1999
- Mechanisms of Altered Excitation-Contraction Coupling in Canine Tachycardia-Induced Heart Failure, II Model Studies
- Yamaguchi, Takaki, Matsubara, Yasuhara, Suga, 1996
- Constancy and variability of contractile efficiency as a function of calcium and cross-bridge kinetics: simulation
- Yang, Clark, Bryan, Robertson, 2003
- The myogenic response in isolated rat cerebrovascular arteries: smooth muscle cell model
- Yi, Fogelson, Keener, Peskin, 2003
- A Mathematical Study of Volume Shifts and Ionic Concentration Changes during Ischemia and Hypoxia
- Zeng, Laurita, Rosenbaum, Rudy, 1995
- Two Components of the Delayed Rectifier K+ Current in Ventricular Myocytes of the Guinea Pig Type