Generic rat heart scaffold

In this workspace we have the Scaffold Maker workflow and configuration files needed to produce the generic rat heart scaffold for the SPARC project.

The heart scaffold consists of separate manifolds to represent different anatomical regions enclosing both the endocardial and epicardial tissue volumes such as left and right atria, left and right ventricles, pulmonary veins etc. The rat heart scaffold was calibrated using segmented image data provided from James Schwaber’s lab at the Thomas Jefferson University, Philadelphia, PA.

Please see the SPARC Portal for more details about the SPARC project.