- Author:
- David Nickerson <nickerso@users.sourceforge.net>
- Date:
- 2012-08-28 16:59:24+12:00
- Desc:
- replacing CellML simulation metadata with CSim summary description; bubbling up membrane currents and potential to allow output/referencing via SED-ML.
- Permanent Source URI:
- http://models.cellml.org/w/andre/VPH-MIP/rawfile/a29bfba242e747b82657c6d2d782937d0a01be79/components/Ileak.xml
<?xml version="1.0" encoding="iso-8859-1"?>
<model
name="Ileak"
cmeta:id="Ileak_model"
xmlns="http://www.cellml.org/cellml/1.1#"
xmlns:cellml="http://www.cellml.org/cellml/1.1#"
xmlns:cmeta="http://www.cellml.org/metadata/1.0#"
xmlns:xlink="http://www.w3.org/1999/xlink">
<rdf:RDF
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:cmeta="http://www.cellml.org/metadata/1.0#"
xmlns:bqs="http://www.cellml.org/bqs/1.0#"
xmlns:dc="http://purl.org/dc/elements/1.1/"
xmlns:dcterms="http://purl.org/dc/terms/"
xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#">
<rdf:Description rdf:about="">
<dc:creator rdf:parseType="Resource">
<vCard:N rdf:parseType="Resource">
<vCard:Family>Nickerson</vCard:Family>
<vCard:Given>David</vCard:Given>
</vCard:N>
<vCard:EMAIL rdf:parseType="Resource">
<rdf:value>david.nickerson@nus.edu.sg</rdf:value>
<rdf:type rdf:resource="http://imc.org/vCard/3.0#internet"/>
</vCard:EMAIL>
<vCard:ORG rdf:parseType="Resource">
<vCard:Orgname>National University of Singapore</vCard:Orgname>
<vCard:Orgunit>Division of Bioengineering</vCard:Orgunit>
</vCard:ORG>
</dc:creator>
<dcterms:created rdf:parseType="Resource">
<dcterms:W3CDTF>2008-03-12</dcterms:W3CDTF>
</dcterms:created>
<dc:publisher>
Division of Bioengineering, National University of Singapore
</dc:publisher>
</rdf:Description>
<rdf:Description rdf:about="#Ileak_model">
<dc:title>
Hodgkin-Huxley leakage current.
</dc:title>
<cmeta:comment rdf:parseType="Resource">
<rdf:value>
A CellML description of the Hodgkin & Huxley leakage current, Ileak.
</rdf:value>
<dc:creator rdf:parseType="Resource">
<vCard:FN>David Nickerson</vCard:FN>
</dc:creator>
</cmeta:comment>
</rdf:Description>
</rdf:RDF>
<import xlink:href="units.xml">
<units name="mV" units_ref="mV"/>
<units name="uA_per_cmsq" units_ref="uA_per_cmsq"/>
<units name="mS_per_cmsq" units_ref="mS_per_cmsq"/>
</import>
<component name="Ileak" cmeta:id="Ileak_component">
<rdf:RDF
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:cmeta="http://www.cellml.org/metadata/1.0#"
xmlns:dc="http://purl.org/dc/elements/1.1/">
<rdf:Description rdf:about="#Ileak_component">
<dc:title>
Hodgkin & Huxley leakage current.
</dc:title>
<cmeta:comment rdf:parseType="Resource">
<rdf:value>
A description of the membrane leakage current of the Hodgkin & Huxley (1952) model.
</rdf:value>
</cmeta:comment>
</rdf:Description>
<rdf:Description rdf:about="#Ileak_calculation">
<cmeta:comment rdf:parseType="Resource">
<rdf:value>
Represents equation 5 of the Hodgkin & Huxley (1952) model used to calculate the leakage current for a specified value of membrane potential.
</rdf:value>
</cmeta:comment>
</rdf:Description>
</rdf:RDF>
<variable cmeta:id="Ileak" name="Ileak" public_interface="out"
private_interface="out" units="uA_per_cmsq"/>
<variable cmeta:id="V" name="V" public_interface="in"
private_interface="out" units="mV"/>
<variable cmeta:id="Vleak" name="Vleak" public_interface="in"
private_interface="out" units="mV"/>
<variable cmeta:id="gleak_max" name="gleak_max" public_interface="in"
private_interface="out" units="mS_per_cmsq"/>
<math xmlns="http://www.w3.org/1998/Math/MathML">
<apply id="Ileak_calculation"><eq/>
<ci>Ileak</ci>
<apply><times/>
<ci>gleak_max</ci>
<apply><minus/>
<ci>V</ci>
<ci>Vleak</ci>
</apply>
</apply>
</apply>
</math>
</component>
</model>