Location: VPH-MIP case study on CellML @ bd1651a373bb / cellml-2.0 / components / IK.xml

Author:
David Nickerson <david.nickerson@gmail.com>
Date:
2019-11-04 22:25:48+09:00
Desc:
adding CellML 2.0 version of this model generated using the CellML1to2 XSL
Permanent Source URI:
http://models.cellml.org/w/andre/VPH-MIP/rawfile/bd1651a373bbed124d4bd763a86c32c2bf2f3ff0/cellml-2.0/components/IK.xml

<?xml version="1.0" encoding="UTF-8"?><model xmlns="http://www.cellml.org/cellml/2.0#" xmlns:cellml="http://www.cellml.org/cellml/2.0#" xmlns:xlink="http://www.w3.org/1999/xlink" name="IK">
  
  <import xlink:href="units.xml">
    <units name="ms" units_ref="ms"/>
    <units name="mV" units_ref="mV"/>
    <units name="per_ms" units_ref="per_ms"/>
    <units name="per_ms_mV" units_ref="per_ms_mV"/>
    <units name="uA_per_cmsq" units_ref="uA_per_cmsq"/>
    <units name="mS_per_cmsq" units_ref="mS_per_cmsq"/>
  </import>
  <import xlink:href="gating-variable.xml">
    <component name="n_gate" component_ref="hh_gating_variable"/>
  </import>
  <import xlink:href="IK-gating-rates.xml">
    <component name="alpha_n" component_ref="alpha_n"/>
    <component name="beta_n" component_ref="beta_n"/>
  </import>
  <component name="IK">
    <variable name="IK" units="uA_per_cmsq" interface="public_and_private"/>
    <variable name="n_initial" units="dimensionless" interface="public_and_private"/>
    <variable name="n" units="dimensionless" interface="public_and_private"/>
    <variable name="time" units="ms" interface="public_and_private"/>
    <variable name="V" units="mV" interface="public_and_private"/>
    <variable name="VK" units="mV" interface="public_and_private"/>
    <variable name="gK" units="mS_per_cmsq" interface="public_and_private"/>
    <variable name="gK_max" units="mS_per_cmsq" interface="public_and_private"/>
    <math xmlns="http://www.w3.org/1998/Math/MathML">
      <apply id="IK_calculation"><eq/>
        <ci>IK</ci>
        <apply><times/>
          <ci>gK</ci>
          <apply><minus/>
            <ci>V</ci>
            <ci>VK</ci>
          </apply>
        </apply>
      </apply>
    </math>
    <math xmlns="http://www.w3.org/1998/Math/MathML">
      <apply id="gK_calculation"><eq/>
        <ci>gK</ci>
        <apply><times/>
          <ci>gK_max</ci>
          <apply><power/>
            <ci>n</ci>
            <cn cellml:units="dimensionless">4.0</cn>
          </apply>
        </apply>
      </apply>
    </math>
  </component>
  <encapsulation>
    
    <component_ref component="IK">
      <component_ref component="alpha_n"/>
      <component_ref component="beta_n"/>
      <component_ref component="n_gate"/>
    </component_ref>
  </encapsulation>
  <connection component_1="IK" component_2="n_gate">
    
    <map_variables variable_1="time" variable_2="time"/>
    <map_variables variable_1="n_initial" variable_2="X_initial"/>
    <map_variables variable_1="n" variable_2="X"/>
  </connection>
  <connection component_1="IK" component_2="alpha_n">
    
    <map_variables variable_1="V" variable_2="V"/>
  </connection>
  <connection component_1="IK" component_2="beta_n">
    
    <map_variables variable_1="V" variable_2="V"/>
  </connection>
  <connection component_1="n_gate" component_2="alpha_n">
    
    <map_variables variable_1="alpha_X" variable_2="alpha"/>
  </connection>
  <connection component_1="n_gate" component_2="beta_n">
    
    <map_variables variable_1="beta_X" variable_2="beta"/>
  </connection>
</model>