Location: difrancesco_noble_1985 @ 4ebefc334fdb / figure3.xml

Author:

AnthonyM <amarchand@enseirb.fr>

Date:

2015-07-20 10:31:58+12:00

Desc:

add figures and create m_cube in the model

Permanent Source URI:

http://models.cellml.org/workspace/24c/rawfile/4ebefc334fdbaa5502316073edb43a7efa28ef06/figure3.xml

<?xml version="1.0" encoding="utf-8"?>
<sedML  xmlns="http://sed-ml.org/" 
       xmlns:math="http://www.w3.org/1998/Math/MathML" level="1" version="1">
	<listOfSimulations>
		<uniformTimeCourse id="simulation1" initialTime="0" outputStartTime="0.15" outputEndTime="0.5" numberOfPoints="800">
			<algorithm kisaoID="KISAO:0000019" />
		</uniformTimeCourse>
	</listOfSimulations>
	<listOfModels>
		<model id="model1" language="urn:sedml:language:cellml" source="http://models.cellml.org/workspace/24c/rawfile/3838d1d26f4e068e7e8ff09a9b14989cedc5c7e7/difrancesco_noble_1985.cellml" />
	</listOfModels>
	<listOfTasks>
		<repeatedTask id="task0" resetModel="True" range="current" modelReference="model1" simulationReference="simulation1" >
			<ranges>
				<vectorRange id="current">
					<value>1</value>

					<value>2</value>

					<value>5</value>
					
					<value>10</value>
					
					<value>20</value>
					
					<value>40</value>
				</vectorRange>
			</ranges>
			<changes>
				<setValue target="/cellml:model/cellml:component[@name='extracellular_potassium_concentration']/cellml:variable[@name='Kb']/@initial_value">
					<listOfVariables>
						<variable id="loopValue" name="current loop value"
                        target="#current"/>
					</listOfVariables>
					<math xmlns="http://www.w3.org/1998/Math/MathML">
						<ci>loopValue</ci>
					</math>
				</setValue>
			</changes>
		</repeatedTask>
	</listOfTasks>
	<listOfDataGenerators>
		<dataGenerator id="time" name="time">
			<listOfVariables>
				<variable id="t" taskReference="task0" target="/cellml:model/cellml:component[@name='environment']/cellml:variable[@name='time']" />
			</listOfVariables>
			<math:math>
				<math:ci>t</math:ci>
			</math:math>
		</dataGenerator>
		<dataGenerator id="Vm1" name="Membrane Potential ">
			<listOfVariables>
				<variable id="v1" taskReference="task0" target="/cellml:model/cellml:component[@name='membrane']/cellml:variable[@name='V']" />
			</listOfVariables>
			<math:math>
				<math:ci>v1</math:ci>
			</math:math>
		</dataGenerator>
		<dataGenerator id="Itot" name=" Total current">
			<listOfVariables>
				<variable id="itot" taskReference="task0" target="/cellml:model/cellml:component[@name='membrane']/cellml:variable[@name='itot']" />
			</listOfVariables>
			<math:math>
				<math:ci>itot</math:ci>
			</math:math>
		</dataGenerator>
	</listOfDataGenerators>
	<listOfOutputs>
		<plot2D id="plot1" name="Total Current">
			<listOfCurves>
				<curve id="curve_1" logX="false" logY="false" xDataReference="Vm1" yDataReference="Itot" />
			</listOfCurves>
		</plot2D>
	</listOfOutputs>
</sedML>